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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d009071_P002 Maize plasma membrane 88.43 89.54
TraesCS5B01G040700.1 Wheat golgi, plasma membrane, vacuole 72.73 71.84
TraesCS5D01G046300.1 Wheat plasma membrane 70.66 69.8
TraesCS5A01G039000.1 Wheat plasma membrane 71.07 68.8
TraesCS5A01G038900.1 Wheat plasma membrane 70.66 68.4
TraesCS5D01G046400.1 Wheat plasma membrane 71.49 64.31
HORVU0Hr1G010080.2 Barley plasma membrane 70.66 63.57
TraesCS5B01G040800.1 Wheat plasma membrane 70.25 63.2
GSMUA_Achr8P10260_001 Banana plasma membrane 62.81 62.55
VIT_05s0077g02260.t01 Wine grape golgi, plasma membrane, vacuole 57.85 60.09
Solyc01g099870.1.1 Tomato plasma membrane, vacuole 40.91 53.23
AT4G15920.1 Thale cress plasma membrane 51.65 51.87
CDY34967 Canola plasma membrane 49.17 51.52
Bra001638.1-P Field mustard plasma membrane 49.17 51.52
Bra021190.1-P Field mustard plasma membrane 49.17 51.52
CDX82395 Canola plasma membrane 49.17 51.52
Bra012752.1-P Field mustard extracellular, golgi, vacuole 50.83 51.25
CDX90555 Canola golgi, plasma membrane, vacuole 50.83 51.25
CDY09729 Canola golgi, plasma membrane, vacuole 50.83 51.25
CDX75890 Canola plasma membrane 48.35 50.65
KRH37080 Soybean plasma membrane 49.17 48.77
PGSC0003DMT400063714 Potato plasma membrane 47.52 48.52
CDY24920 Canola extracellular, golgi, vacuole 30.99 48.39
KRH12074 Soybean plasma membrane 48.35 47.76
GSMUA_Achr11P... Banana plasma membrane 56.2 45.95
AT3G16690.3 Thale cress plasma membrane 48.76 44.53
Bra038060.1-P Field mustard extracellular, golgi, plasma membrane 42.56 42.21
EES20039 Sorghum golgi, plasma membrane, vacuole 38.02 38.49
EES19554 Sorghum golgi, plasma membrane 39.67 37.5
EES01331 Sorghum endoplasmic reticulum, plasma membrane, plastid 35.54 37.23
EES01039 Sorghum plasma membrane 37.19 36.89
KXG32677 Sorghum golgi, plasma membrane, vacuole 35.95 35.8
EES06723 Sorghum golgi, plasma membrane, plastid 36.36 35.2
EES06744 Sorghum golgi, plasma membrane, plastid 36.36 35.2
KXG33819 Sorghum extracellular, golgi 38.84 34.94
EER94881 Sorghum golgi, plasma membrane 46.28 34.04
EES00047 Sorghum plasma membrane 33.47 31.27
KXG21564 Sorghum plasma membrane 31.41 30.89
OQU84855 Sorghum plasma membrane 31.82 29.39
OQU89754 Sorghum plastid 32.23 28.57
EES15957 Sorghum golgi, plasma membrane 35.54 28.48
EES17001 Sorghum golgi, plasma membrane 34.71 27.63
EES06868 Sorghum golgi, plasma membrane, plastid 36.78 26.49
OQU79094 Sorghum plasma membrane 34.3 26.43
KXG28442 Sorghum golgi, plasma membrane 30.99 25.95
EER92278 Sorghum golgi, plasma membrane 31.41 24.28
VIT_14s0060g01890.t01 Wine grape plasma membrane 50.83 24.21
EES14183 Sorghum plastid 30.58 23.95
Bra008206.1-P Field mustard nucleus 0.83 3.64
Protein Annotations
EnsemblPlants:OQU86800EnsemblPlantsGene:SORBI_3003G149000Gene3D:1.20.1280.290GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0008643GO:GO:0016020GO:GO:0016021InterPro:SWEET_sugar_transprPANTHER:PTHR10791PANTHER:PTHR10791:SF29
PFAM:PF03083ProteinID:OQU86800ProteinID:OQU86800.1SEG:segTMHMM:TMhelixUniParc:UPI0009DC8514
UniProt:A0A1W0VXE3MapMan:24.2.6.1::::
Description
hypothetical protein
Coordinates
chr3:+:15675304..15680861
Molecular Weight (calculated)
26382.5 Da
IEP (calculated)
6.940
GRAVY (calculated)
0.717
Length
242 amino acids
Sequence
(BLAST)
001: MDSTLFIIGV IGNIISVLVF TSPIKTFWRI VRSGSTEEFE PAPYVFTLLN GLLWLYYGVT KPDGFLVATV NGFGALMEAI YVVLFIVYAA NHATRVKTVK
101: LAAALDIGGF GVVYAVARFA INELDLRIMV IGTICACLNV LMYGSPLAAM KTVITTKSVE FMPFFLSFFL FLNGGIWATY AVLDRDMFLG IPNGIGFVLG
201: TIQLIIYAIY MNSKTSQSSK ETASPLLASD HNQGEASSHS HV
Best Arabidopsis Sequence Match ( AT4G15920.1 )
(BLAST)
001: MAEASFYIGV IGNVISVLVF LSPVETFWKI VKRRSTEEYK SLPYICTLLG SSLWTYYGIV TPGEYLVSTV NGFGALVETI YVSLFLFYAP RHLKLKTVDV
101: EAMLNVFFPI AAIVATRSAF EDEKMRSQSI GFISAGLNII MYGSPLSAMK TVVTTKSVKY MPFWLSFFLF LNGAIWAVYA LLQHDVFLLV PNGVGFVFGT
201: MQLILYGIYR NAKPVGLSNG LSEIAQDEEE GLTSRVEPLL S
Arabidopsis Description
SWEET17Nodulin MtN3 family protein [Source:TAIR;Acc:AT4G15920]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.