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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • plastid 3
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
EES06868 plasma membrane
EES14183 plasma membrane
EES15957 plasma membrane
EES17001 plasma membrane
KXG28442 plasma membrane
OQU79094 plasma membrane
OQU89754 plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48740.1 EES06868 AT3G48740.1 24027245
AT3G48740.1 EES14183 AT3G48740.1 24027245
AT3G48740.1 EES15957 AT3G48740.1 24027245
AT3G48740.1 EES17001 AT3G48740.1 24027245
AT3G48740.1 KXG28442 AT3G48740.1 24027245
AT3G48740.1 OQU79094 AT3G48740.1 24027245
AT3G48740.1 OQU89754 AT3G48740.1 24027245
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES15957 Sorghum golgi, plasma membrane 93.75 94.37
Zm00001d023677_P001 Maize plasma membrane 92.76 93.38
Zm00001d023673_P001 Maize plasma membrane 91.78 92.69
Zm00001d041067_P001 Maize plasma membrane 87.17 89.83
OQU79094 Sorghum plasma membrane 90.13 87.26
TraesCS6B01G421600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 51.64 82.2
Os12t0476200-01 Rice extracellular, golgi 74.67 76.69
HORVU6Hr1G089540.2 Barley golgi, plasma membrane 68.42 71.97
TraesCS6A01G382600.1 Wheat plasma membrane 68.42 71.72
TraesCS6D01G367400.1 Wheat plasma membrane 68.42 71.72
TraesCS6D01G367200.1 Wheat plasma membrane 67.43 71.18
TraesCS6B01G421800.1 Wheat plasma membrane 67.76 71.03
TraesCS6B01G421500.1 Wheat plasma membrane 68.42 70.75
TraesCS6D01G367300.1 Wheat golgi, plasma membrane, vacuole 66.12 70.53
TraesCS6A01G382400.1 Wheat plasma membrane 67.76 69.83
TraesCS6B01G421700.1 Wheat plasma membrane 63.82 68.07
KXG28442 Sorghum golgi, plasma membrane 63.82 67.13
KRH63814 Soybean extracellular 20.72 64.95
GSMUA_Achr3P18700_001 Banana golgi, plasma membrane, plastid 55.59 60.14
CDY69440 Canola plasma membrane 42.11 59.81
GSMUA_Achr6P23850_001 Banana golgi, plasma membrane 52.96 58.55
KRH63811 Soybean plasma membrane 49.01 57.75
HORVU6Hr1G089600.1 Barley golgi, mitochondrion, peroxisome 66.78 57.67
TraesCS6A01G382500.1 Wheat plasma membrane 57.89 57.33
GSMUA_Achr6P07950_001 Banana golgi, plasma membrane 53.62 56.6
VIT_17s0000g00830.t01 Wine grape plasma membrane 50.0 56.3
KRH54140 Soybean plasma membrane 47.7 55.77
KRH54141 Soybean plasma membrane 47.04 55.43
KRH41097 Soybean golgi, plasma membrane 45.39 54.33
KRH59785 Soybean endoplasmic reticulum, plasma membrane 45.72 54.09
KRH63812 Soybean endoplasmic reticulum, golgi, plasma membrane 49.34 53.19
CDY11047 Canola golgi, plasma membrane 47.37 52.75
CDX92666 Canola golgi, plasma membrane 47.04 52.38
AT4G25010.1 Thale cress plasma membrane 48.36 52.31
PGSC0003DMT400011081 Potato plasma membrane 43.42 52.17
Bra013854.1-P Field mustard golgi, plasma membrane 46.71 52.01
CDY03395 Canola endoplasmic reticulum, golgi, plasma membrane 46.71 52.01
CDY34333 Canola golgi, plasma membrane 46.71 52.01
Solyc03g097620.1.1 Tomato plasma membrane 47.04 51.81
CDY24854 Canola golgi, plasma membrane 46.05 51.66
Bra026487.1-P Field mustard endoplasmic reticulum, plasma membrane 47.04 51.62
Bra010477.1-P Field mustard golgi, plasma membrane 46.05 51.47
CDX87161 Canola endoplasmic reticulum 46.71 51.26
Solyc06g072620.2.1 Tomato golgi, plasma membrane 48.36 51.22
PGSC0003DMT400082699 Potato extracellular, plasma membrane 21.71 50.77
KRH42232 Soybean endoplasmic reticulum, plasma membrane 45.72 50.73
AT5G50800.1 Thale cress plasma membrane 49.01 50.68
CDY16863 Canola endoplasmic reticulum, plasma membrane 46.05 50.54
KRH46857 Soybean golgi, plasma membrane 45.07 50.18
Bra019197.1-P Field mustard plasma membrane 39.14 50.0
KRH01827 Soybean golgi, plasma membrane 44.08 50.0
Solyc03g097610.2.1 Tomato golgi, plasma membrane 46.38 50.0
Bra019560.1-P Field mustard plasma membrane 46.71 49.82
CDX77928 Canola plasma membrane 46.71 49.82
PGSC0003DMT400011076 Potato golgi, mitochondrion, plasma membrane, plastid 32.57 49.75
Solyc03g097580.2.1 Tomato golgi, plasma membrane 49.34 49.67
PGSC0003DMT400081210 Potato golgi, plasma membrane 48.36 49.66
AT5G23660.1 Thale cress plasma membrane 46.38 49.47
GSMUA_Achr10P... Banana plasma membrane 54.28 49.4
CDX84877 Canola golgi, plasma membrane 44.08 49.26
KRH46856 Soybean plasma membrane 44.08 49.26
KRH58347 Soybean golgi, plasma membrane 45.72 49.12
KRH01828 Soybean plasma membrane 43.75 49.08
Bra040489.1-P Field mustard golgi, plasma membrane 47.37 48.98
CDY05819 Canola golgi, plasma membrane 47.37 48.98
Bra009700.1-P Field mustard plasma membrane 46.38 48.96
CDX88041 Canola plasma membrane 46.38 48.96
PGSC0003DMT400081212 Potato golgi, plasma membrane 46.05 48.95
CDX71659 Canola golgi, plasma membrane 47.37 48.81
AT3G48740.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 46.38 48.79
CDX80379 Canola plasma membrane 46.05 48.61
CDX68492 Canola plasma membrane 45.72 48.6
CDX83046 Canola plasma membrane 45.72 48.6
Bra018039.1-P Field mustard plasma membrane 46.05 48.44
CDY05867 Canola plasma membrane 46.05 48.44
CDY08093 Canola plasma membrane 46.05 48.44
Solyc03g097590.2.1 Tomato golgi, plasma membrane 47.37 48.32
Solyc03g097870.2.1 Tomato golgi, plasma membrane 47.37 48.0
Bra029914.1-P Field mustard plasma membrane 45.72 47.93
Bra022761.1-P Field mustard golgi, plasma membrane 45.39 47.75
Solyc03g097600.2.1 Tomato golgi, plasma membrane 46.38 47.64
PGSC0003DMT400083992 Potato golgi, plasma membrane 46.71 47.33
PGSC0003DMT400081211 Potato golgi, plasma membrane 45.72 46.96
OQU89754 Sorghum plastid 42.11 46.89
PGSC0003DMT400081206 Potato golgi, plasma membrane 45.07 46.76
AT5G50790.1 Thale cress plasma membrane 44.41 46.71
Solyc03g097560.2.1 Tomato golgi, plasma membrane 45.07 46.44
Solyc06g072630.2.1 Tomato plasma membrane 44.08 46.37
VIT_17s0000g00820.t01 Wine grape plasma membrane 40.13 45.86
AT5G13170.1 Thale cress plasma membrane 43.75 45.55
CDY08964 Canola plastid 43.09 45.49
CDX97233 Canola golgi, plasma membrane 44.41 45.3
Bra012412.1-P Field mustard plasma membrane 25.99 45.14
VIT_01s0146g00260.t01 Wine grape golgi, plasma membrane 34.87 45.11
CDX69663 Canola golgi, plasma membrane 44.08 44.97
KRH54137 Soybean plasma membrane 45.39 44.66
CDY25828 Canola mitochondrion, plasma membrane 25.66 44.57
Bra023394.1-P Field mustard plasma membrane 43.42 44.44
CDX85668 Canola endoplasmic reticulum, golgi, plasma membrane 43.42 44.44
CDX91144 Canola plasma membrane 43.42 44.44
Solyc03g097570.2.1 Tomato cytosol, golgi, plasma membrane 44.41 44.41
EES06868 Sorghum golgi, plasma membrane, plastid 48.68 44.05
CDY53626 Canola plasma membrane 42.11 43.99
KRH10466 Soybean golgi, plasma membrane 35.86 43.78
Solyc05g024260.2.1 Tomato plasma membrane 42.43 43.73
Solyc06g072640.1.1 Tomato plasma membrane 40.46 43.62
CDX78511 Canola plasma membrane 41.78 43.49
KRH41096 Soybean golgi, plasma membrane 41.78 43.2
EER92278 Sorghum golgi, plasma membrane 43.09 41.85
KRH43976 Soybean golgi, plasma membrane, plastid 37.17 40.36
KRH59783 Soybean golgi, plasma membrane 31.25 40.25
EES14183 Sorghum plastid 40.13 39.48
EES01039 Sorghum plasma membrane 31.25 38.93
Bra006185.1-P Field mustard golgi, plasma membrane, plastid 38.49 37.03
Bra008850.1-P Field mustard plasma membrane 25.33 36.84
OQU86800 Sorghum golgi, plasma membrane, vacuole 27.63 34.71
PGSC0003DMT400021966 Potato mitochondrion 22.37 34.0
EES19554 Sorghum golgi, plasma membrane 28.62 33.98
KXG33819 Sorghum extracellular, golgi 29.93 33.83
EES01331 Sorghum endoplasmic reticulum, plasma membrane, plastid 25.33 33.33
EES06723 Sorghum golgi, plasma membrane, plastid 27.3 33.2
EES06744 Sorghum golgi, plasma membrane, plastid 26.97 32.8
KXG21564 Sorghum plasma membrane 26.32 32.52
EES20039 Sorghum golgi, plasma membrane, vacuole 25.33 32.22
EES00047 Sorghum plasma membrane 25.99 30.5
KXG32677 Sorghum golgi, plasma membrane, vacuole 24.34 30.45
OQU84855 Sorghum plasma membrane 23.03 26.72
EER94881 Sorghum golgi, plasma membrane 28.62 26.44
Protein Annotations
Gene3D:1.20.1280.290MapMan:24.2.6.1EntrezGene:8061260UniProt:C5YNL0EnsemblPlants:EES17001ProteinID:EES17001
ProteinID:EES17001.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006810GO:GO:0008150GO:GO:0008643GO:GO:0016020GO:GO:0016021GO:GO:0034219
GO:GO:0051119PFAM:PF03083PANTHER:PTHR10791PANTHER:PTHR10791:SF56EnsemblPlantsGene:SORBI_3008G094000InterPro:SWEET_sugar_transpr
unigene:Sbi.3110TMHMM:TMhelixUniParc:UPI0001A88378RefSeq:XP_002443163.1SEG:seg:
Description
hypothetical protein
Coordinates
chr8:-:43917195..43919961
Molecular Weight (calculated)
33255.8 Da
IEP (calculated)
9.863
GRAVY (calculated)
0.781
Length
304 amino acids
Sequence
(BLAST)
001: MAGLSLQHPW AFAFGLLGNV ISFMTFLAPI PTFYRIYKTK STEGFQSVPY VVALFSAMLW IFYALIKSNE TFLITINAAG CVIETIYIIM YFVYAPKKGK
101: MFTAKIMLLL NVGIFGVILL LTLLLFKGDK RVVMLGWICV GFSVSVFVAP LSIMKRVIQT KSVEYMPFSL SLSLTLSAVV WFLYGLLIKD KYVALPNILG
201: FTFGVVQMVL YVLYMNKTPV AVAEGKDAGG KLPSAADEHV LVNIAKLSPA LPERSSGVHP VVAQMAAVPN RSCAAEAAAP PAMLPNRDVV DVFVSRHSPA
301: VHVV
Best Arabidopsis Sequence Match ( AT5G23660.1 )
(BLAST)
001: MALFDTHNTW AFVFGLLGNL ISFAVFLSPV PTFYRICKKK TTEGFQSIPY VVALFSAMLW LYYATQKKDV FLLVTINSFG CFIETIYISI FVAFASKKAR
101: MLTVKLLLLM NFGGFCLILL LCQFLAKGTT RAKIIGGICV GFSVCVFAAP LSIIRTVIKT KSVEYMPFSL SLTLTISAVI WLLYGLALKD IYVAFPNVIG
201: FVLGALQMIL YVVYKYCKTP SDLVEKELEA AKLPEVSIDM VKLGTLTSPE PVAITVVRSV NTCNCNDRNA EIENGQGVRN SAATT
Arabidopsis Description
SWEET12Bidirectional sugar transporter SWEET12 [Source:UniProtKB/Swiss-Prot;Acc:O82587]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.