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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, peroxisome, golgi

Predictor Summary:
  • mitochondrion 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion, peroxisome
Any Predictor:golgi, mitochondrion, peroxisome
iPSORT:mitochondrion
MultiLoc:golgi
TargetP:mitochondrion
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G010210.2 plasma membrane
HORVU5Hr1G076770.1 plasma membrane
HORVU6Hr1G000440.3 plasma membrane
HORVU6Hr1G089540.2 plasma membrane
HORVU6Hr1G089600.1 plasma membrane
HORVU7Hr1G030160.1 plasma membrane
HORVU7Hr1G054710.1 plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48740.1 HORVU1Hr1G010210.2 AT3G48740.1 24027245
AT3G48740.1 HORVU5Hr1G076770.1 AT3G48740.1 24027245
AT3G48740.1 HORVU6Hr1G000440.3 AT3G48740.1 24027245
AT3G48740.1 HORVU6Hr1G089540.2 AT3G48740.1 24027245
AT3G48740.1 HORVU6Hr1G089600.1 AT3G48740.1 24027245
AT3G48740.1 HORVU7Hr1G030160.1 AT3G48740.1 24027245
AT3G48740.1 HORVU7Hr1G054710.1 AT3G48740.1 24027245
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G421600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 51.14 94.24
HORVU6Hr1G089540.2 Barley golgi, plasma membrane 76.7 93.43
TraesCS6B01G421800.1 Wheat plasma membrane 76.14 92.41
TraesCS6D01G367400.1 Wheat plasma membrane 76.14 92.41
TraesCS6A01G382600.1 Wheat plasma membrane 75.28 91.38
TraesCS6D01G367200.1 Wheat plasma membrane 74.43 90.97
TraesCS6A01G382400.1 Wheat plasma membrane 76.14 90.85
TraesCS6B01G421500.1 Wheat plasma membrane 75.85 90.82
TraesCS6B01G421700.1 Wheat plasma membrane 71.02 87.72
TraesCS6D01G367300.1 Wheat golgi, plasma membrane, vacuole 70.17 86.67
Os12t0476200-01 Rice extracellular, golgi 59.09 70.27
Zm00001d041067_P001 Maize plasma membrane 56.25 67.12
Zm00001d023673_P001 Maize plasma membrane 57.39 67.11
EES15957 Sorghum golgi, plasma membrane 57.39 66.89
Zm00001d023677_P001 Maize plasma membrane 57.39 66.89
EES17001 Sorghum golgi, plasma membrane 57.67 66.78
KRH63814 Soybean extracellular 18.18 65.98
TraesCS6A01G382500.1 Wheat plasma membrane 57.1 65.47
HORVU1Hr1G010210.2 Barley plasma membrane 51.99 62.67
OQU79094 Sorghum plasma membrane 55.11 61.78
HORVU6Hr1G000440.3 Barley golgi, plasma membrane 51.14 61.22
CDY69440 Canola plasma membrane 36.08 59.35
GSMUA_Achr3P18700_001 Banana golgi, plasma membrane, plastid 45.74 57.3
GSMUA_Achr6P23850_001 Banana golgi, plasma membrane 44.03 56.36
KRH63811 Soybean plasma membrane 39.77 54.26
GSMUA_Achr6P07950_001 Banana golgi, plasma membrane 44.32 54.17
KRH41097 Soybean golgi, plasma membrane 38.35 53.15
KRH54140 Soybean plasma membrane 39.2 53.08
KRH59785 Soybean endoplasmic reticulum, plasma membrane 38.64 52.92
KRH54141 Soybean plasma membrane 38.64 52.71
VIT_17s0000g00830.t01 Wine grape plasma membrane 40.34 52.59
CDX92666 Canola golgi, plasma membrane 40.34 52.01
CDY11047 Canola golgi, plasma membrane 40.34 52.01
CDY24854 Canola golgi, plasma membrane 39.2 50.92
AT4G25010.1 Thale cress plasma membrane 40.62 50.89
Bra010477.1-P Field mustard golgi, plasma membrane 39.2 50.74
KRH01827 Soybean golgi, plasma membrane 38.07 50.0
Bra026487.1-P Field mustard endoplasmic reticulum, plasma membrane 39.2 49.82
CDX87161 Canola endoplasmic reticulum 39.2 49.82
CDY03395 Canola endoplasmic reticulum, golgi, plasma membrane 38.64 49.82
CDY34333 Canola golgi, plasma membrane 38.64 49.82
Bra019197.1-P Field mustard plasma membrane 33.52 49.58
Bra013854.1-P Field mustard golgi, plasma membrane 38.35 49.45
KRH46857 Soybean golgi, plasma membrane 38.35 49.45
KRH63812 Soybean endoplasmic reticulum, golgi, plasma membrane 39.49 49.29
CDY16863 Canola endoplasmic reticulum, plasma membrane 38.64 49.1
KRH42232 Soybean endoplasmic reticulum, plasma membrane 38.07 48.91
KRH01828 Soybean plasma membrane 37.5 48.71
KRH46856 Soybean plasma membrane 37.5 48.53
Bra019560.1-P Field mustard plasma membrane 39.2 48.42
CDX77928 Canola plasma membrane 39.2 48.42
Solyc03g097620.1.1 Tomato plasma membrane 37.78 48.19
CDX84877 Canola golgi, plasma membrane 37.22 48.16
AT5G23660.1 Thale cress plasma membrane 38.92 48.07
KRH58347 Soybean golgi, plasma membrane 38.64 48.06
CDX68492 Canola plasma membrane 38.92 47.9
CDX83046 Canola plasma membrane 38.92 47.9
PGSC0003DMT400011081 Potato plasma membrane 34.38 47.83
AT3G48740.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 39.2 47.75
Bra018039.1-P Field mustard plasma membrane 39.2 47.75
CDY05867 Canola plasma membrane 39.2 47.75
CDY08093 Canola plasma membrane 39.2 47.75
Solyc06g072620.2.1 Tomato golgi, plasma membrane 38.92 47.74
Bra029914.1-P Field mustard plasma membrane 38.92 47.24
Bra009700.1-P Field mustard plasma membrane 38.64 47.22
CDX88041 Canola plasma membrane 38.64 47.22
GSMUA_Achr10P... Banana plasma membrane 44.6 47.01
PGSC0003DMT400082699 Potato extracellular, plasma membrane 17.33 46.92
CDX80379 Canola plasma membrane 38.35 46.88
CDY08964 Canola plastid 38.35 46.88
PGSC0003DMT400011076 Potato golgi, mitochondrion, plasma membrane, plastid 26.42 46.73
PGSC0003DMT400081212 Potato golgi, plasma membrane 37.78 46.5
AT5G50800.1 Thale cress plasma membrane 38.64 46.26
Bra040489.1-P Field mustard golgi, plasma membrane 38.64 46.26
CDY05819 Canola golgi, plasma membrane 38.64 46.26
CDX71659 Canola golgi, plasma membrane 38.64 46.1
Solyc03g097610.2.1 Tomato golgi, plasma membrane 36.93 46.1
Bra022761.1-P Field mustard golgi, plasma membrane 37.78 46.02
VIT_17s0000g00820.t01 Wine grape plasma membrane 34.38 45.49
Solyc03g097580.2.1 Tomato golgi, plasma membrane 38.92 45.36
PGSC0003DMT400081210 Potato golgi, plasma membrane 38.07 45.27
Bra012412.1-P Field mustard plasma membrane 22.44 45.14
VIT_01s0146g00260.t01 Wine grape golgi, plasma membrane 30.11 45.11
AT5G13170.1 Thale cress plasma membrane 37.22 44.86
Solyc03g097560.2.1 Tomato golgi, plasma membrane 37.5 44.75
PGSC0003DMT400081206 Potato golgi, plasma membrane 37.22 44.71
CDY25828 Canola mitochondrion, plasma membrane 22.16 44.57
Solyc03g097590.2.1 Tomato golgi, plasma membrane 37.5 44.3
KRH10466 Soybean golgi, plasma membrane 31.25 44.18
Solyc03g097870.2.1 Tomato golgi, plasma membrane 37.5 44.0
CDY53626 Canola plasma membrane 36.36 43.99
AT5G50790.1 Thale cress plasma membrane 36.08 43.94
PGSC0003DMT400083992 Potato golgi, plasma membrane 37.22 43.67
Solyc06g072630.2.1 Tomato plasma membrane 35.8 43.6
PGSC0003DMT400081211 Potato golgi, plasma membrane 36.65 43.58
CDX78511 Canola plasma membrane 36.08 43.49
KRH54137 Soybean plasma membrane 38.07 43.37
Solyc03g097600.2.1 Tomato golgi, plasma membrane 36.36 43.24
HORVU7Hr1G030160.1 Barley plasma membrane 38.35 43.13
CDX97233 Canola golgi, plasma membrane 36.36 42.95
CDX69663 Canola golgi, plasma membrane 36.08 42.62
KRH41096 Soybean golgi, plasma membrane 35.51 42.52
Bra023394.1-P Field mustard plasma membrane 35.8 42.42
CDX85668 Canola endoplasmic reticulum, golgi, plasma membrane 35.8 42.42
CDX91144 Canola plasma membrane 35.8 42.42
Solyc05g024260.2.1 Tomato plasma membrane 35.51 42.37
HORVU5Hr1G076770.1 Barley golgi, plasma membrane 38.07 41.74
Solyc03g097570.2.1 Tomato cytosol, golgi, plasma membrane 35.51 41.12
HORVU3Hr1G013170.1 Barley golgi, plasma membrane 35.8 40.13
Solyc06g072640.1.1 Tomato plasma membrane 32.1 40.07
KRH43976 Soybean golgi, plasma membrane, plastid 31.82 40.0
KRH59783 Soybean golgi, plasma membrane 26.7 39.83
HORVU7Hr1G054710.1 Barley plasma membrane 33.81 39.27
Bra006185.1-P Field mustard golgi, plasma membrane, plastid 33.24 37.03
PGSC0003DMT400021966 Potato mitochondrion 21.02 37.0
HORVU2Hr1G006520.1 Barley peroxisome, plasma membrane, vacuole 24.15 36.48
HORVU2Hr1G006510.1 Barley plasma membrane 24.72 35.37
Bra008850.1-P Field mustard plasma membrane 20.45 34.45
HORVU7Hr1G117490.1 Barley plasma membrane 23.86 32.31
HORVU0Hr1G010080.2 Barley plasma membrane 24.43 31.97
HORVU6Hr1G055960.1 Barley golgi, plasma membrane, plastid 22.44 31.6
HORVU1Hr1G079940.2 Barley peroxisome, plasma membrane, plastid 24.72 30.31
HORVU1Hr1G029920.4 Barley plasma membrane 21.02 29.84
HORVU3Hr1G091230.10 Barley plasma membrane 24.72 29.79
HORVU6Hr1G029520.4 Barley plastid 21.59 24.6
Protein Annotations
EnsemblPlants:HORVU6Hr1G089600.1EnsemblPlantsGene:HORVU6Hr1G089600Gene3D:1.20.1280.290GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0008643GO:GO:0016020GO:GO:0016021InterPro:SWEET_sugar_transprPANTHER:PTHR10791PANTHER:PTHR10791:SF56
PFAM:PF03083SEG:segTMHMM:TMhelixUniParc:UPI000B47F7F5UniProt:A0A287V4H3MapMan:24.2.6.1
Description
No Description!
Coordinates
chrchr6H:-:570135624..570137778
Molecular Weight (calculated)
38746.1 Da
IEP (calculated)
9.244
GRAVY (calculated)
0.602
Length
352 amino acids
Sequence
(BLAST)
001: ITKLTIQAKS LNQLRELSSP DLSLLSARSL GLERERERDS KNNLSPHCYT KFFASISLLY IFVTMGGLSM EHPWAFTFGL LGNVISFSSL LAPIPTFYRI
101: FKSKSTEGFQ SVPYVVALFS AMLWIFYALV KTGEGLLITI NAAGCVIETV YIIMYLVYAP RKAKIFTAKI VLLLNIAGFG LIFVLTLFAF HGETRVVSLG
201: WICVGFSVCV FVAPLSIIGR VIKTKSVEYM PFSLSLTLTL SAIVWFLYGL LIKDKYVALP NILGFTFGMI QMVLYMFYMN ATPVVATDAK EGKEAWKVPA
301: EDHVVVINVG KADKSSCAEV RPVTEMAGDV PRRCATEAAA PGAGFARSVE VV
Best Arabidopsis Sequence Match ( AT3G48740.1 )
(BLAST)
001: MSLFNTENTW AFVFGLLGNL ISFAVFLSPV PTFYRIWKKK TTEGFQSIPY VVALFSATLW LYYATQKKDV FLLVTINAFG CFIETIYISM FLAYAPKPAR
101: MLTVKMLLLM NFGGFCAILL LCQFLVKGAT RAKIIGGICV GFSVCVFAAP LSIIRTVIKT RSVEYMPFSL SLTLTISAVI WLLYGLALKD IYVAFPNVLG
201: FALGALQMIL YVVYKYCKTS PHLGEKEVEA AKLPEVSLDM LKLGTVSSPE PISVVRQANK CTCGNDRRAE IEDGQTPKHG KQSSSAAAT
Arabidopsis Description
SWEET11Bidirectional sugar transporter SWEET11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMM5]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.