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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, vacuole, plasma membrane

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome, plasma membrane, vacuole
Any Predictor:peroxisome, secretory
iPSORT:secretory
MultiLoc:peroxisome
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G079940.2 plasma membrane, plasma membrane
HORVU1Hr1G082010.3
HORVU2Hr1G006510.1 plasma membrane, plasma membrane
HORVU2Hr1G006520.1 plasma membrane, plasma membrane
HORVU3Hr1G030760.2
HORVU3Hr1G069970.2
HORVU7Hr1G075700.2
HORVU7Hr1G081290.4
HORVU7Hr1G117490.1 plasma membrane, plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G28007.1 HORVU1Hr1G079940.2 AT3G28007.1 24027245
AT3G28007.1 HORVU2Hr1G006510.1 AT3G28007.1 24027245
AT3G28007.1 HORVU2Hr1G006520.1 AT3G28007.1 24027245
AT3G28007.1 HORVU7Hr1G117490.1 AT3G28007.1 24027245
AT5G40260.1 HORVU1Hr1G079940.2 AT5G40260.1 24027245
AT5G40260.1 HORVU2Hr1G006510.1 AT5G40260.1 24027245
AT5G40260.1 HORVU2Hr1G006520.1 AT5G40260.1 24027245
AT5G40260.1 HORVU7Hr1G117490.1 AT5G40260.1 24027245
AT5G40260.1 HORVU1Hr1G082010.3 AT5G41600.1 21798944
AT5G40260.1 HORVU3Hr1G030760.2 AT5G41600.1 21798944
AT5G40260.1 HORVU3Hr1G069970.2 AT5G41600.1 21798944
AT5G40260.1 HORVU7Hr1G075700.2 AT5G41600.1 21798944
AT5G40260.1 HORVU7Hr1G081290.4 AT5G41600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G042400.1 Wheat plasma membrane 87.98 87.98
TraesCS2B01G055700.1 Wheat plasma membrane 87.98 87.98
TraesCS2A01G043200.1 Wheat plasma membrane 87.55 87.55
HORVU2Hr1G006510.1 Barley plasma membrane 69.53 65.85
HORVU7Hr1G117490.1 Barley plasma membrane 68.67 61.54
GSMUA_Achr10P... Banana extracellular, golgi, plasma membrane 59.23 58.97
GSMUA_Achr6P09180_001 Banana plasma membrane 57.94 57.45
HORVU1Hr1G079940.2 Barley peroxisome, plasma membrane, plastid 69.1 56.1
Bra033034.1-P Field mustard plasma membrane 58.37 55.51
CDY49756 Canola plasma membrane 58.37 55.51
CDY04003 Canola plasma membrane 57.94 54.66
Bra025317.1-P Field mustard plasma membrane 57.94 54.44
VIT_17s0000g08110.t01 Wine grape cytosol, golgi, plasma membrane 54.08 53.85
VIT_14s0066g01420.t01 Wine grape plasma membrane 58.37 53.54
AT3G28007.1 Thale cress plasma membrane 56.65 52.59
PGSC0003DMT400069697 Potato cytosol, golgi, plasma membrane 52.79 51.68
KRH20314 Soybean plasma membrane 54.08 51.43
Solyc06g071400.2.1 Tomato cytosol, golgi, plasma membrane 52.36 51.26
KRG93335 Soybean plasma membrane 54.08 51.22
Solyc03g114200.2.1 Tomato golgi, plasma membrane, plastid 51.5 50.85
CDY45751 Canola extracellular, golgi, plasma membrane 51.93 50.42
CDY30733 Canola extracellular, golgi, plasma membrane 51.93 50.42
Bra029245.1-P Field mustard extracellular, golgi, plasma membrane 51.93 50.42
HORVU6Hr1G055960.1 Barley golgi, plasma membrane, plastid 53.65 50.0
VIT_17s0000g08130.t01 Wine grape golgi, plasma membrane, vacuole 33.05 50.0
CDY36831 Canola plasma membrane 51.07 50.0
KRG93333 Soybean plasma membrane 52.36 49.59
CDY16757 Canola extracellular, peroxisome, plasma membrane 51.07 49.58
KRH03315 Soybean golgi, plasma membrane, plastid 48.07 49.56
Bra029244.1-P Field mustard plasma membrane 50.64 49.17
Bra035879.1-P Field mustard extracellular, golgi, plasma membrane 50.64 49.17
CDY56741 Canola plasma membrane 50.64 49.17
CDY30734 Canola plasma membrane 50.64 49.17
AT5G62850.1 Thale cress plasma membrane 50.64 49.17
CDY44578 Canola plasma membrane 49.79 48.74
KRH57053 Soybean plasma membrane 47.21 48.67
Solyc02g086920.1.1 Tomato golgi, plasma membrane 48.5 48.5
Bra025595.1-P Field mustard plasma membrane 49.36 48.32
AT5G40260.1 Thale cress plasma membrane 47.21 46.03
PGSC0003DMT400001425 Potato golgi, plasma membrane 35.62 45.86
CDX86454 Canola plasma membrane, plastid 57.94 45.45
CDY44448 Canola plasma membrane, plastid 57.94 44.7
CDX84358 Canola plasma membrane 36.91 41.15
Solyc11g028270.1.1 Tomato extracellular 28.76 37.43
CDY45750 Canola cytosol, golgi, plasma membrane 42.49 34.26
HORVU6Hr1G089540.2 Barley golgi, plasma membrane 37.34 30.1
HORVU3Hr1G091230.10 Barley plasma membrane 37.34 29.79
HORVU1Hr1G029920.4 Barley plasma membrane 31.33 29.44
HORVU0Hr1G010080.2 Barley plasma membrane 33.91 29.37
HORVU1Hr1G010210.2 Barley plasma membrane 35.19 28.08
HORVU6Hr1G029520.4 Barley plastid 36.05 27.18
HORVU7Hr1G030160.1 Barley plasma membrane 36.48 27.16
HORVU6Hr1G000440.3 Barley golgi, plasma membrane 33.91 26.87
HORVU5Hr1G076770.1 Barley golgi, plasma membrane 35.19 25.55
HORVU3Hr1G013170.1 Barley golgi, plasma membrane 33.91 25.16
HORVU6Hr1G089600.1 Barley golgi, mitochondrion, peroxisome 36.48 24.15
HORVU7Hr1G054710.1 Barley plasma membrane 30.47 23.43
Protein Annotations
EnsemblPlants:HORVU2Hr1G006520.1EnsemblPlantsGene:HORVU2Hr1G006520Gene3D:1.20.1280.290GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006810GO:GO:0008150GO:GO:0008643GO:GO:0016020GO:GO:0016021InterPro:SWEET_sugar_transpr
PANTHER:PTHR10791PANTHER:PTHR10791:SF68PFAM:PF03083SEG:segTMHMM:TMhelixUniParc:UPI000B478B95
UniProt:A0A287GZK1MapMan:24.2.6.1::::
Description
Bidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:A0A287GZK1]
Coordinates
chrchr2H:-:13644166..13646353
Molecular Weight (calculated)
25831.1 Da
IEP (calculated)
6.733
GRAVY (calculated)
0.674
Length
233 amino acids
Sequence
(BLAST)
001: MVTADEARNI VGIMGNCISF CLFLSPAPTF DRICKNKDVE QFTPDPYLAT LMNCLLWFFY GLPIVHPNSF LVITINGIGI IIETIYLSIF FLYSPPKKRL
101: KMLIVLGFEV VFVASVVTGV LISAHTHEDR SRIVGIICII FGTIMYAAPL TVMGKVIKTK SVEYMPFTVS LANTINGGCW LAYGLIKFDL YVTIPNAIGT
201: GLGIFQLILY LCYYNSTPTT EQNVELPNAV ADN
Best Arabidopsis Sequence Match ( AT1G66770.1 )
(BLAST)
001: MVHEQLNLIR KIVGILGNFI SLCLFLSPTP TFIHIVKKKS VEKYSPLPYL ATLLNCLVRA LYGLPMVHPD STLLVTISGI GITIEIVFLT IFFVFCGRQQ
101: HRLVISAVLT VQVVFVATLA VLVLTLEHTT DQRTISVGIV SCVFNAMMYA SPLSVMKMVI KTKSLEFMPF LLSVVGFLNA GVWTIYGFVP FDPFLAIPNG
201: IGCVFGLVQL ILYGTYYKST KGIMEERKNR LGYVGEVGLS NAIAQTEPEN IPYLNKRVSG V
Arabidopsis Description
SWEET6Bidirectional sugar transporter SWEET6 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9M9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.