Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc02g086920.1.1 | plasma membrane |
| Solyc08g081730.2.1 | |
| Solyc11g028270.1.1 | plasma membrane |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G40260.1 | Solyc02g086920.1.1 | AT5G40260.1 | 24027245 |
| AT5G40260.1 | Solyc11g028270.1.1 | AT5G40260.1 | 24027245 |
| AT5G40260.1 | Solyc08g081730.2.1 | AT5G41600.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400001425 | Potato | golgi, plasma membrane | 73.82 | 95.03 |
| Solyc11g028270.1.1 | Tomato | extracellular | 52.36 | 68.16 |
| Os09t0256650-00 | Rice | extracellular | 21.89 | 52.04 |
| TraesCS7B01G064800.1 | Wheat | plasma membrane | 45.06 | 50.97 |
| TraesCS7B01G410800.1 | Wheat | golgi, plasma membrane, vacuole | 39.06 | 50.84 |
| TraesCS7B01G451200.1 | Wheat | plasma membrane | 52.36 | 50.21 |
| TraesCS7A01G533900.1 | Wheat | plasma membrane | 52.36 | 50.21 |
| TraesCS7D01G521400.1 | Wheat | plasma membrane | 52.36 | 50.21 |
| TraesCS1B01G377200.1 | Wheat | plasma membrane | 53.22 | 50.2 |
| TraesCS1A01G360900.1 | Wheat | plasma membrane | 52.79 | 49.8 |
| HORVU2Hr1G006510.1 | Barley | plasma membrane | 52.36 | 49.59 |
| TraesCS7B01G410700.1 | Wheat | plasma membrane | 52.36 | 49.59 |
| TraesCS2B01G056100.1 | Wheat | plasma membrane | 52.36 | 49.59 |
| TraesCSU01G013200.1 | Wheat | plasma membrane | 52.36 | 49.59 |
| TraesCSU01G162000.1 | Wheat | plasma membrane | 52.36 | 49.59 |
| TraesCS1D01G365200.1 | Wheat | plasma membrane | 52.36 | 49.39 |
| TraesCSU01G013400.1 | Wheat | plasma membrane | 51.93 | 49.19 |
| TraesCS2A01G051800.1 | Wheat | plasma membrane | 51.93 | 49.19 |
| TraesCS2D01G042500.1 | Wheat | plasma membrane | 51.93 | 49.19 |
| TraesCS2D01G042600.1 | Wheat | plasma membrane | 51.93 | 49.19 |
| EES01039 | Sorghum | plasma membrane | 51.5 | 49.18 |
| GSMUA_Achr10P... | Banana | extracellular, golgi, plasma membrane | 49.36 | 49.15 |
| TraesCS7B01G064400.1 | Wheat | plasma membrane | 51.5 | 48.78 |
| TraesCSU01G181700.1 | Wheat | plasma membrane | 51.5 | 48.78 |
| TraesCS7B01G064600.1 | Wheat | plasma membrane | 51.5 | 48.78 |
| TraesCS7A01G159800.1 | Wheat | plasma membrane | 51.5 | 48.78 |
| TraesCS2B01G055900.1 | Wheat | plasma membrane | 51.5 | 48.78 |
| TraesCSU01G191700.1 | Wheat | plasma membrane | 51.5 | 48.78 |
| TraesCS2A01G043400.1 | Wheat | plasma membrane | 51.5 | 48.78 |
| HORVU2Hr1G006520.1 | Barley | peroxisome, plasma membrane, vacuole | 48.5 | 48.5 |
| TraesCS7B01G064700.1 | Wheat | plasma membrane | 51.07 | 48.37 |
| TraesCS7B01G064300.1 | Wheat | plasma membrane | 51.07 | 48.37 |
| KRG93335 | Soybean | plasma membrane | 51.07 | 48.37 |
| Solyc03g114200.2.1 | Tomato | golgi, plasma membrane, plastid | 48.93 | 48.31 |
| KRH20314 | Soybean | plasma membrane | 50.64 | 48.16 |
| Zm00001d011299_P001 | Maize | plasma membrane | 50.21 | 48.15 |
| TraesCS7D01G160600.1 | Wheat | plasma membrane | 50.64 | 47.97 |
| Solyc06g071400.2.1 | Tomato | cytosol, golgi, plasma membrane | 48.93 | 47.9 |
| TraesCS7A01G503100.1 | Wheat | plasma membrane | 50.64 | 47.77 |
| EES20039 | Sorghum | golgi, plasma membrane, vacuole | 48.93 | 47.7 |
| GSMUA_Achr6P09180_001 | Banana | plasma membrane | 48.07 | 47.66 |
| Zm00001d044421_P001 | Maize | plasma membrane | 49.79 | 47.54 |
| TraesCS7D01G490600.1 | Wheat | plasma membrane | 33.05 | 47.53 |
| TraesCS2B01G055700.1 | Wheat | plasma membrane | 47.21 | 47.21 |
| TraesCS2A01G043200.1 | Wheat | plasma membrane | 47.21 | 47.21 |
| Os05t0588500-01 | Rice | golgi, plasma membrane, vacuole | 47.64 | 46.84 |
| TraesCS2D01G042400.1 | Wheat | plasma membrane | 46.78 | 46.78 |
| CDY36831 | Canola | plasma membrane | 47.64 | 46.64 |
| CDY44578 | Canola | plasma membrane | 47.21 | 46.22 |
| Os01t0606000-00 | Rice | plasma membrane | 51.07 | 45.95 |
| Bra025595.1-P | Field mustard | plasma membrane | 46.78 | 45.8 |
| Os01t0605700-01 | Rice | golgi, plasma membrane, plastid | 49.79 | 45.67 |
| TraesCSU01G232400.1 | Wheat | plasma membrane | 38.2 | 45.64 |
| HORVU7Hr1G117490.1 | Barley | plasma membrane | 50.64 | 45.38 |
| TraesCS2D01G052100.1 | Wheat | plasma membrane | 37.77 | 45.13 |
| KRG93333 | Soybean | plasma membrane | 47.21 | 44.72 |
| TraesCS7B01G064500.1 | Wheat | plasma membrane | 36.91 | 44.1 |
| AT5G40260.1 | Thale cress | plasma membrane | 45.06 | 43.93 |
| TraesCSU01G249100.1 | Wheat | golgi, plasma membrane, vacuole | 27.04 | 43.45 |
| HORVU1Hr1G079940.2 | Barley | peroxisome, plasma membrane, plastid | 53.22 | 43.21 |
| TraesCSU01G249000.1 | Wheat | golgi, plasma membrane, vacuole | 26.61 | 42.76 |
| Os09t0258700-00 | Rice | plasma membrane | 40.34 | 42.34 |
| TraesCS2B01G055800.1 | Wheat | plasma membrane | 51.5 | 41.67 |
| TraesCS7A01G503200.1 | Wheat | plasma membrane | 46.78 | 41.29 |
| Solyc12g055870.1.1 | Tomato | golgi, plasma membrane | 42.06 | 40.83 |
| TraesCS3D01G227000.1 | Wheat | plasma membrane | 34.76 | 39.9 |
| Solyc02g071520.2.1 | Tomato | plasma membrane | 39.91 | 39.57 |
| TraesCS7A01G503300.1 | Wheat | plasma membrane | 42.92 | 39.53 |
| TraesCS2B01G056000.2 | Wheat | plasma membrane | 45.49 | 38.69 |
| Solyc03g005880.2.1 | Tomato | plasma membrane | 39.06 | 38.4 |
| Os12t0178500-00 | Rice | plasma membrane | 34.33 | 38.28 |
| Solyc01g099870.1.1 | Tomato | plasma membrane, vacuole | 30.47 | 38.17 |
| Solyc04g064620.2.1 | Tomato | extracellular, golgi, plasma membrane | 39.48 | 37.55 |
| Solyc06g060580.1.1 | Tomato | golgi, plasma membrane | 39.48 | 36.65 |
| Solyc08g082770.2.1 | Tomato | golgi, plasma membrane | 39.06 | 36.26 |
| Solyc04g064610.2.1 | Tomato | plasma membrane | 38.2 | 36.18 |
| Solyc07g062120.2.1 | Tomato | plasma membrane, plastid | 35.62 | 35.32 |
| Solyc06g060590.2.1 | Tomato | plasma membrane | 37.77 | 34.38 |
| Solyc04g064640.2.1 | Tomato | endoplasmic reticulum, golgi | 35.62 | 34.02 |
| Solyc04g064630.2.1 | Tomato | golgi, plasma membrane | 35.62 | 33.2 |
| Solyc03g007360.2.1 | Tomato | golgi, plasma membrane | 33.48 | 30.35 |
| Solyc01g099880.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 36.05 | 28.67 |
| Os09t0254600-00 | Rice | plastid | 30.9 | 27.91 |
| Solyc03g097620.1.1 | Tomato | plasma membrane | 31.76 | 26.81 |
| Solyc09g074530.2.1 | Tomato | golgi, plasma membrane | 32.62 | 26.57 |
| Solyc06g072620.2.1 | Tomato | golgi, plasma membrane | 32.19 | 26.13 |
| Solyc03g097580.2.1 | Tomato | golgi, plasma membrane | 33.48 | 25.83 |
| Solyc03g097610.2.1 | Tomato | golgi, plasma membrane | 30.9 | 25.53 |
| Solyc03g097560.2.1 | Tomato | golgi, plasma membrane | 32.19 | 25.42 |
| Solyc06g072630.2.1 | Tomato | plasma membrane | 31.33 | 25.26 |
| Solyc06g072640.1.1 | Tomato | plasma membrane | 30.04 | 24.82 |
| Solyc03g097570.2.1 | Tomato | cytosol, golgi, plasma membrane | 32.19 | 24.67 |
| Solyc03g097870.2.1 | Tomato | golgi, plasma membrane | 31.76 | 24.67 |
| Solyc03g097600.2.1 | Tomato | golgi, plasma membrane | 30.9 | 24.32 |
| Solyc03g097590.2.1 | Tomato | golgi, plasma membrane | 30.9 | 24.16 |
| Solyc05g024260.2.1 | Tomato | plasma membrane | 30.04 | 23.73 |
Protein Annotations
| Gene3D:1.20.1280.290 | MapMan:24.2.6.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008643 | GO:GO:0009555 |
| GO:GO:0009653 | GO:GO:0009987 | GO:GO:0010208 | GO:GO:0010584 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0034219 | GO:GO:0051119 | GO:GO:0051260 | GO:GO:0052543 | UniProt:K4BBJ9 |
| PFAM:PF03083 | PANTHER:PTHR10791 | PANTHER:PTHR10791:SF42 | InterPro:SWEET_sugar_transpr | EnsemblPlantsGene:Solyc02g086920.1 | EnsemblPlants:Solyc02g086920.1.1 |
| TMHMM:TMhelix | UniParc:UPI0002767D34 | SEG:seg | : | : | : |
Description
Bidirectional sugar transporter SWEET4 [Source:Projected from Arabidopsis thaliana (AT3G28007) UniProtKB/Swiss-Prot;Acc:Q944M5]
Coordinates
chr2:-:49505274..49506930
Molecular Weight (calculated)
25931.7 Da
IEP (calculated)
9.683
GRAVY (calculated)
0.713
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MVMSTNDIRF IVGIIGNVLS FVLFASPMPT FRRIIKNKSV EEFHPYPYLA STMNCLMWIY YGMPFVHPHS ILVVTINSVG LFMQLCYISI FFFYTGKRYR
101: LQIVSILFGE VVGLAAAVAG TMLGLHTYAS RTTVVGILAT AFGICMYGSP LSIMYKVIKT KSAEFLPKTL SIACFLNGIC WAIYALLKFD PYILTGNGVG
201: ALLALIQLAL IVIYRNPPPK DQKPSKVELQ NVV
101: LQIVSILFGE VVGLAAAVAG TMLGLHTYAS RTTVVGILAT AFGICMYGSP LSIMYKVIKT KSAEFLPKTL SIACFLNGIC WAIYALLKFD PYILTGNGVG
201: ALLALIQLAL IVIYRNPPPK DQKPSKVELQ NVV
001: MTDPHTARTI VGIVGNVISF GLFCAPIPTM VKIWKMKSVS EFKPDPYVAT VLNCMMWTFY GLPFVQPDSL LVITINGTGL FMELVYVTIF FVFATSPVRR
101: KITIAMVIEV IFMAVVIFCT MYFLHTTKQR SMLIGILCIV FNVIMYAAPL TVMKLVIKTK SVKYMPFFLS LANFMNGVVW VIYACLKFDP YILIPNGLGS
201: LSGIIQLIIY ITYYKTTNWN DDDEDKEKRY SNAGIELGQA
101: KITIAMVIEV IFMAVVIFCT MYFLHTTKQR SMLIGILCIV FNVIMYAAPL TVMKLVIKTK SVKYMPFFLS LANFMNGVVW VIYACLKFDP YILIPNGLGS
201: LSGIIQLIIY ITYYKTTNWN DDDEDKEKRY SNAGIELGQA
Arabidopsis Description
SWEET5Bidirectional sugar transporter SWEET5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM10]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.