Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
28056797
|
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0226300-01 | |
| Os01t0605700-01 | plasma membrane, plasma membrane |
| Os01t0606000-00 | plasma membrane, plasma membrane |
| Os01t0736900-01 | |
| Os02t0265900-01 | |
| Os05t0526400-01 | |
| Os05t0588500-01 | plasma membrane, plasma membrane |
| Os06t0503400-01 | |
| Os09t0254600-00 | plasma membrane, plasma membrane |
| Os09t0256650-00 | plasma membrane, plasma membrane |
| Os09t0258700-00 | plasma membrane, plasma membrane |
| Os12t0178500-00 | plasma membrane, plasma membrane |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0605700-01 | Rice | golgi, plasma membrane, plastid | 91.51 | 93.31 |
| TraesCS7B01G410700.1 | Wheat | plasma membrane | 76.83 | 80.89 |
| Zm00001d044421_P001 | Maize | plasma membrane | 75.29 | 79.92 |
| EES01039 | Sorghum | plasma membrane | 75.29 | 79.92 |
| Zm00001d011299_P001 | Maize | plasma membrane | 74.52 | 79.42 |
| TraesCS7A01G533900.1 | Wheat | plasma membrane | 73.75 | 78.6 |
| TraesCS7D01G521400.1 | Wheat | plasma membrane | 73.75 | 78.6 |
| TraesCS7B01G451200.1 | Wheat | plasma membrane | 73.36 | 78.19 |
| TraesCS7A01G503100.1 | Wheat | plasma membrane | 74.13 | 77.73 |
| TraesCS1A01G360900.1 | Wheat | plasma membrane | 73.36 | 76.92 |
| Os09t0256650-00 | Rice | extracellular | 28.96 | 76.53 |
| TraesCS1B01G377200.1 | Wheat | plasma membrane | 72.59 | 76.11 |
| TraesCS1D01G365200.1 | Wheat | plasma membrane | 72.59 | 76.11 |
| TraesCS7B01G410800.1 | Wheat | golgi, plasma membrane, vacuole | 52.12 | 75.42 |
| TraesCSU01G249100.1 | Wheat | golgi, plasma membrane, vacuole | 40.54 | 72.41 |
| TraesCS2D01G042600.1 | Wheat | plasma membrane | 68.34 | 71.95 |
| TraesCS2D01G042500.1 | Wheat | plasma membrane | 68.34 | 71.95 |
| TraesCS2B01G056100.1 | Wheat | plasma membrane | 68.34 | 71.95 |
| TraesCSU01G162000.1 | Wheat | plasma membrane | 68.34 | 71.95 |
| TraesCSU01G191700.1 | Wheat | plasma membrane | 68.34 | 71.95 |
| TraesCS2B01G055900.1 | Wheat | plasma membrane | 68.34 | 71.95 |
| TraesCSU01G181700.1 | Wheat | plasma membrane | 68.34 | 71.95 |
| TraesCSU01G249000.1 | Wheat | golgi, plasma membrane, vacuole | 40.15 | 71.72 |
| TraesCS7B01G064400.1 | Wheat | plasma membrane | 67.95 | 71.54 |
| TraesCS2A01G051800.1 | Wheat | plasma membrane | 67.95 | 71.54 |
| HORVU2Hr1G006510.1 | Barley | plasma membrane | 67.95 | 71.54 |
| TraesCS7B01G064600.1 | Wheat | plasma membrane | 67.95 | 71.54 |
| TraesCSU01G013400.1 | Wheat | plasma membrane | 67.95 | 71.54 |
| TraesCS2A01G043400.1 | Wheat | plasma membrane | 67.57 | 71.14 |
| TraesCS7B01G064300.1 | Wheat | plasma membrane | 67.57 | 71.14 |
| TraesCS7D01G160600.1 | Wheat | plasma membrane | 67.57 | 71.14 |
| TraesCS7A01G159800.1 | Wheat | plasma membrane | 67.57 | 71.14 |
| TraesCSU01G013200.1 | Wheat | plasma membrane | 67.18 | 70.73 |
| TraesCS7B01G064800.1 | Wheat | plasma membrane | 55.98 | 70.39 |
| TraesCS7D01G490600.1 | Wheat | plasma membrane | 44.02 | 70.37 |
| TraesCS7B01G064700.1 | Wheat | plasma membrane | 66.41 | 69.92 |
| HORVU7Hr1G117490.1 | Barley | plasma membrane | 69.88 | 69.62 |
| TraesCS2D01G052100.1 | Wheat | plasma membrane | 51.74 | 68.72 |
| TraesCSU01G232400.1 | Wheat | plasma membrane | 51.35 | 68.21 |
| TraesCS7B01G064500.1 | Wheat | plasma membrane | 50.58 | 67.18 |
| Os05t0588500-01 | Rice | golgi, plasma membrane, vacuole | 61.39 | 67.09 |
| GSMUA_Achr10P... | Banana | extracellular, golgi, plasma membrane | 58.3 | 64.53 |
| HORVU1Hr1G079940.2 | Barley | peroxisome, plasma membrane, plastid | 71.43 | 64.46 |
| GSMUA_Achr6P09180_001 | Banana | plasma membrane | 57.14 | 62.98 |
| Os09t0258700-00 | Rice | plasma membrane | 53.67 | 62.61 |
| TraesCS7A01G503200.1 | Wheat | plasma membrane | 62.55 | 61.36 |
| Os12t0178500-00 | Rice | plasma membrane | 49.42 | 61.24 |
| TraesCS2B01G055800.1 | Wheat | plasma membrane | 67.95 | 61.11 |
| TraesCS7A01G503300.1 | Wheat | plasma membrane | 58.69 | 60.08 |
| VIT_14s0066g01420.t01 | Wine grape | plasma membrane | 57.53 | 58.66 |
| TraesCS2B01G056000.2 | Wheat | plasma membrane | 60.62 | 57.3 |
| VIT_17s0000g08110.t01 | Wine grape | cytosol, golgi, plasma membrane | 50.19 | 55.56 |
| PGSC0003DMT400069697 | Potato | cytosol, golgi, plasma membrane | 50.58 | 55.04 |
| CDY49756 | Canola | plasma membrane | 51.74 | 54.69 |
| Bra033034.1-P | Field mustard | plasma membrane | 51.74 | 54.69 |
| KRG93335 | Soybean | plasma membrane | 51.74 | 54.47 |
| KRG93333 | Soybean | plasma membrane | 51.74 | 54.47 |
| Bra025317.1-P | Field mustard | plasma membrane | 52.12 | 54.44 |
| KRH20314 | Soybean | plasma membrane | 51.35 | 54.29 |
| Solyc06g071400.2.1 | Tomato | cytosol, golgi, plasma membrane | 49.81 | 54.2 |
| CDY04003 | Canola | plasma membrane | 50.97 | 53.44 |
| Solyc03g114200.2.1 | Tomato | golgi, plasma membrane, plastid | 48.65 | 53.39 |
| AT3G28007.1 | Thale cress | plasma membrane | 51.74 | 53.39 |
| CDY16757 | Canola | extracellular, peroxisome, plasma membrane | 49.42 | 53.33 |
| CDY56741 | Canola | plasma membrane | 49.42 | 53.33 |
| Bra035879.1-P | Field mustard | extracellular, golgi, plasma membrane | 49.03 | 52.92 |
| Bra029245.1-P | Field mustard | extracellular, golgi, plasma membrane | 48.26 | 52.08 |
| CDY30733 | Canola | extracellular, golgi, plasma membrane | 48.26 | 52.08 |
| CDY45751 | Canola | extracellular, golgi, plasma membrane | 47.88 | 51.67 |
| AT5G62850.1 | Thale cress | plasma membrane | 47.49 | 51.25 |
| Solyc02g086920.1.1 | Tomato | golgi, plasma membrane | 45.95 | 51.07 |
| Os02t0301100-01 | Rice | plasma membrane | 50.97 | 50.97 |
| KRH57053 | Soybean | plasma membrane | 44.4 | 50.88 |
| PGSC0003DMT400001425 | Potato | golgi, plasma membrane | 35.52 | 50.83 |
| CDY30734 | Canola | plasma membrane | 45.56 | 49.17 |
| Bra029244.1-P | Field mustard | plasma membrane | 45.56 | 49.17 |
| KRH03315 | Soybean | golgi, plasma membrane, plastid | 42.86 | 49.12 |
| CDY36831 | Canola | plasma membrane | 43.63 | 47.48 |
| AT5G40260.1 | Thale cress | plasma membrane | 43.63 | 47.28 |
| CDY44578 | Canola | plasma membrane | 42.86 | 46.64 |
| Bra025595.1-P | Field mustard | plasma membrane | 42.47 | 46.22 |
| CDX86454 | Canola | plasma membrane, plastid | 52.12 | 45.45 |
| VIT_17s0000g08130.t01 | Wine grape | golgi, plasma membrane, vacuole | 26.64 | 44.81 |
| CDY44448 | Canola | plasma membrane, plastid | 52.12 | 44.7 |
| Os09t0254600-00 | Rice | plastid | 42.86 | 43.02 |
| Os05t0426000-01 | Rice | plasma membrane | 42.47 | 42.15 |
| Solyc11g028270.1.1 | Tomato | extracellular | 28.19 | 40.78 |
| CDX84358 | Canola | plasma membrane | 32.82 | 40.67 |
| Os01t0881300-02 | Rice | plasma membrane | 42.08 | 39.93 |
| Os01t0700100-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 32.05 | 36.09 |
| CDY45750 | Canola | cytosol, golgi, plasma membrane | 39.38 | 35.29 |
| Os01t0541800-01 | Rice | plasma membrane | 32.05 | 34.16 |
| Os12t0476200-01 | Rice | extracellular, golgi | 33.98 | 29.73 |
| Os05t0214300-00 | Rice | golgi, plasma membrane | 29.34 | 29.23 |
| Os03t0347500-01 | Rice | golgi, plasma membrane | 33.2 | 28.67 |
| Os11t0508600-01 | Rice | golgi, plasma membrane | 31.66 | 27.06 |
| Os02t0513100-01 | Rice | golgi, plasma membrane, plastid | 33.2 | 26.96 |
| Os08t0535200-01 | Rice | golgi, plasma membrane, plastid | 30.12 | 25.41 |
| Os09t0508250-00 | Rice | extracellular, golgi | 15.06 | 22.29 |
| Os03t0341300-01 | Rice | plasma membrane | 21.62 | 22.05 |
Protein Annotations
| Gene3D:1.20.1280.290 | MapMan:24.2.6.1 | EntrezGene:4324214 | ProteinID:BAB92465.1 | ProteinID:BAF05437.2 | ProteinID:BAS73069.1 |
| ProteinID:EAZ12627.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0005887 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008643 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0034219 | GO:GO:0051119 | EnsemblPlantsGene:Os01g0606000 | EnsemblPlants:Os01t0606000-00 | PFAM:PF03083 | PANTHER:PTHR10791 |
| PANTHER:PTHR10791:SF68 | UniProt:Q8LR09 | InterPro:SWEET_sugar_transpr | TMHMM:TMhelix | UniParc:UPI00000A8272 | RefSeq:XP_015645348.1 |
| SEG:seg | : | : | : | : | : |
Description
SWEET6AMtN3 and saliva related transmembrane protein family protein. (Os01t0606000-00)
Coordinates
chr1:+:23877540..23880467
Molecular Weight (calculated)
28171.4 Da
IEP (calculated)
9.336
GRAVY (calculated)
0.763
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MISPDAARNV VGIIGNVISF GLFLAPVPTF WRICKRKDVE EFKADPYLAT LLNCMLWVFY GIPVVHPNSI LVVTINGIGL LVEGTYLLIF FLYSPNKKRL
101: RMCAVLGVEL VFMLAVILGV LLGAHTHEKR SMIVGILCVF FGSIMYFSPL TIMGKVIKTK SVEYMPFFLS LVCFLNGVCW TAYALIRFDI YVTIPNGLGA
201: LFGAIQLILY ACYYRTTPKK TKAAKDVEMP SVVVSGTGAA AAAGGGNTGG GSVSVTVER
101: RMCAVLGVEL VFMLAVILGV LLGAHTHEKR SMIVGILCVF FGSIMYFSPL TIMGKVIKTK SVEYMPFFLS LVCFLNGVCW TAYALIRFDI YVTIPNGLGA
201: LFGAIQLILY ACYYRTTPKK TKAAKDVEMP SVVVSGTGAA AAAGGGNTGG GSVSVTVER
001: MVNATVARNI AGICGNVISL FLFLSPIPTF ITIYKKKKVE EYKADPYLAT VLNCALWVFY GLPMVQPDSL LVITINGTGL AIELVYLAIF FFFSPTSRKV
101: KVGLWLIGEM VFVGIVATCT LLLFHTHNQR SSFVGIFCVI FVSLMYIAPL TIMSKVIKTK SVKYMPFSLS LANFLNGVVW VIYALIKFDL FILIGNGLGT
201: VSGAVQLILY ACYYKTTPKD DEDEEDEENL SKVNSQLQLS GNSGQAKRVS A
101: KVGLWLIGEM VFVGIVATCT LLLFHTHNQR SSFVGIFCVI FVSLMYIAPL TIMSKVIKTK SVKYMPFSLS LANFLNGVVW VIYALIKFDL FILIGNGLGT
201: VSGAVQLILY ACYYKTTPKD DEDEEDEENL SKVNSQLQLS GNSGQAKRVS A
Arabidopsis Description
SWEET4Bidirectional sugar transporter SWEET4 [Source:UniProtKB/Swiss-Prot;Acc:Q944M5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.