Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1A01G346800.3 | |
| TraesCS1A01G360900.1 | plasma membrane, plasma membrane |
| TraesCS1B01G360800.1 | |
| TraesCS1B01G377200.1 | plasma membrane, plasma membrane |
| TraesCS1D01G349700.1 | |
| TraesCS1D01G365200.1 | plasma membrane, plasma membrane |
| TraesCS2A01G043200.1 | plasma membrane, plasma membrane |
| TraesCS2A01G043400.1 | plasma membrane, plasma membrane |
| TraesCS2A01G051800.1 | plasma membrane, plasma membrane |
| TraesCS2B01G055700.1 | plasma membrane, plasma membrane |
| TraesCS2B01G055800.1 | plasma membrane, plasma membrane |
| TraesCS2B01G055900.1 | plasma membrane, plasma membrane |
| TraesCS2B01G056000.2 | plasma membrane, plasma membrane |
| TraesCS2B01G056100.1 | plasma membrane, plasma membrane |
| TraesCS2D01G042400.1 | plasma membrane, plasma membrane |
| TraesCS2D01G042500.1 | plasma membrane, plasma membrane |
| TraesCS2D01G042600.1 | plasma membrane, plasma membrane |
| TraesCS2D01G052100.1 | plasma membrane, plasma membrane |
| TraesCS3A01G151200.1 | |
| TraesCS3A01G278800.1 | |
| TraesCS3B01G178100.1 | |
| TraesCS3B01G313000.1 | |
| TraesCS3D01G159100.1 | |
| TraesCS3D01G227000.1 | plasma membrane, plasma membrane |
| TraesCS3D01G279100.1 | |
| TraesCS7A01G159800.1 | plasma membrane, plasma membrane |
| TraesCS7A01G341800.1 | |
| TraesCS7A01G503100.1 | plasma membrane, plasma membrane |
| TraesCS7A01G503200.1 | plasma membrane, plasma membrane |
| TraesCS7A01G503300.1 | plasma membrane, plasma membrane |
| TraesCS7A01G533900.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064300.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064400.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064500.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064600.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064700.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064800.1 | plasma membrane, plasma membrane |
| TraesCS7B01G241100.1 | |
| TraesCS7B01G410700.1 | plasma membrane, plasma membrane |
| TraesCS7B01G410800.1 | plasma membrane, plasma membrane |
| TraesCS7B01G451200.1 | plasma membrane, plasma membrane |
| TraesCS7D01G160600.1 | plasma membrane, plasma membrane |
| TraesCS7D01G337800.1 | |
| TraesCS7D01G490600.1 | plasma membrane, plasma membrane |
| TraesCS7D01G521400.1 | plasma membrane, plasma membrane |
| TraesCSU01G013200.1 | plasma membrane, plasma membrane |
| TraesCSU01G013400.1 | plasma membrane, plasma membrane |
| TraesCSU01G162000.1 | plasma membrane, plasma membrane |
| TraesCSU01G181700.1 | plasma membrane, plasma membrane |
| TraesCSU01G191700.1 | plasma membrane, plasma membrane |
| TraesCSU01G232400.1 | plasma membrane, plasma membrane |
| TraesCSU01G249000.1 | plasma membrane, plasma membrane |
| TraesCSU01G249100.1 | plasma membrane, plasma membrane |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G249000.1 | Wheat | golgi, plasma membrane, vacuole | 51.82 | 97.93 |
| TraesCSU01G249100.1 | Wheat | golgi, plasma membrane, vacuole | 51.82 | 97.93 |
| TraesCS7B01G064500.1 | Wheat | plasma membrane | 67.88 | 95.38 |
| TraesCS2B01G055800.1 | Wheat | plasma membrane | 94.53 | 89.93 |
| TraesCS2B01G055900.1 | Wheat | plasma membrane | 79.93 | 89.02 |
| TraesCS2B01G056100.1 | Wheat | plasma membrane | 79.2 | 88.21 |
| TraesCS7B01G064600.1 | Wheat | plasma membrane | 77.74 | 86.59 |
| TraesCS7B01G064400.1 | Wheat | plasma membrane | 77.74 | 86.59 |
| TraesCS7B01G064300.1 | Wheat | plasma membrane | 77.01 | 85.77 |
| TraesCS7B01G064700.1 | Wheat | plasma membrane | 75.18 | 83.74 |
| TraesCS7B01G064800.1 | Wheat | plasma membrane | 58.76 | 78.16 |
| HORVU2Hr1G006510.1 | Barley | plasma membrane | 68.25 | 76.02 |
| TraesCS1B01G377200.1 | Wheat | plasma membrane | 67.88 | 75.3 |
| TraesCS7B01G410700.1 | Wheat | plasma membrane | 66.42 | 73.98 |
| TraesCS7B01G451200.1 | Wheat | plasma membrane | 62.04 | 69.96 |
| EES01039 | Sorghum | plasma membrane | 61.68 | 69.26 |
| Zm00001d044421_P001 | Maize | plasma membrane | 59.49 | 66.8 |
| Zm00001d011299_P001 | Maize | plasma membrane | 58.76 | 66.26 |
| TraesCS7B01G410800.1 | Wheat | golgi, plasma membrane, vacuole | 42.7 | 65.36 |
| Os01t0605700-01 | Rice | golgi, plasma membrane, plastid | 56.57 | 61.02 |
| Os01t0606000-00 | Rice | plasma membrane | 57.3 | 60.62 |
| TraesCS2B01G055700.1 | Wheat | plasma membrane | 50.37 | 59.23 |
| GSMUA_Achr10P... | Banana | extracellular, golgi, plasma membrane | 48.54 | 56.84 |
| GSMUA_Achr6P09180_001 | Banana | plasma membrane | 47.81 | 55.74 |
| VIT_14s0066g01420.t01 | Wine grape | plasma membrane | 48.54 | 52.36 |
| VIT_17s0000g08130.t01 | Wine grape | golgi, plasma membrane, vacuole | 29.2 | 51.95 |
| VIT_17s0000g08110.t01 | Wine grape | cytosol, golgi, plasma membrane | 43.43 | 50.85 |
| Solyc03g114200.2.1 | Tomato | golgi, plasma membrane, plastid | 42.7 | 49.58 |
| PGSC0003DMT400001425 | Potato | golgi, plasma membrane | 32.48 | 49.17 |
| CDY45751 | Canola | extracellular, golgi, plasma membrane | 43.07 | 49.17 |
| CDY30733 | Canola | extracellular, golgi, plasma membrane | 42.7 | 48.75 |
| Bra029245.1-P | Field mustard | extracellular, golgi, plasma membrane | 42.7 | 48.75 |
| Solyc06g071400.2.1 | Tomato | cytosol, golgi, plasma membrane | 41.97 | 48.32 |
| PGSC0003DMT400069697 | Potato | cytosol, golgi, plasma membrane | 41.61 | 47.9 |
| Bra033034.1-P | Field mustard | plasma membrane | 42.7 | 47.76 |
| CDY49756 | Canola | plasma membrane | 42.7 | 47.76 |
| Bra025317.1-P | Field mustard | plasma membrane | 42.7 | 47.18 |
| CDY16757 | Canola | extracellular, peroxisome, plasma membrane | 41.24 | 47.08 |
| CDY04003 | Canola | plasma membrane | 42.34 | 46.96 |
| KRH20314 | Soybean | plasma membrane | 41.97 | 46.94 |
| Bra029244.1-P | Field mustard | plasma membrane | 40.88 | 46.67 |
| Bra035879.1-P | Field mustard | extracellular, golgi, plasma membrane | 40.88 | 46.67 |
| CDY30734 | Canola | plasma membrane | 40.88 | 46.67 |
| KRG93335 | Soybean | plasma membrane | 41.61 | 46.34 |
| CDY56741 | Canola | plasma membrane | 40.15 | 45.83 |
| AT5G62850.1 | Thale cress | plasma membrane | 40.15 | 45.83 |
| AT3G28007.1 | Thale cress | plasma membrane | 41.97 | 45.82 |
| Solyc02g086920.1.1 | Tomato | golgi, plasma membrane | 38.69 | 45.49 |
| TraesCS6B01G248300.1 | Wheat | plasma membrane | 41.97 | 45.1 |
| KRG93333 | Soybean | plasma membrane | 40.15 | 44.72 |
| KRH03315 | Soybean | golgi, plasma membrane, plastid | 36.13 | 43.81 |
| CDX84358 | Canola | plasma membrane | 32.85 | 43.06 |
| KRH57053 | Soybean | plasma membrane | 35.4 | 42.92 |
| CDY36831 | Canola | plasma membrane | 37.23 | 42.86 |
| AT5G40260.1 | Thale cress | plasma membrane | 36.86 | 42.26 |
| Bra025595.1-P | Field mustard | plasma membrane | 35.77 | 41.18 |
| CDY44578 | Canola | plasma membrane | 35.77 | 41.18 |
| CDX86454 | Canola | plasma membrane, plastid | 42.7 | 39.39 |
| CDY44448 | Canola | plasma membrane, plastid | 42.7 | 38.74 |
| TraesCS1B01G276000.1 | Wheat | golgi, plasma membrane, vacuole | 36.5 | 38.31 |
| Solyc11g028270.1.1 | Tomato | extracellular | 23.72 | 36.31 |
| TraesCS3B01G287200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 30.29 | 35.93 |
| TraesCS3B01G441800.1 | Wheat | golgi, plasma membrane | 35.77 | 35.77 |
| TraesCS6B01G176800.1 | Wheat | plasma membrane | 30.29 | 34.73 |
| CDY45750 | Canola | cytosol, golgi, plasma membrane | 35.77 | 33.91 |
| TraesCS6B01G421600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 23.36 | 33.51 |
| TraesCS5B01G040700.1 | Wheat | golgi, plasma membrane, vacuole | 28.1 | 31.43 |
| TraesCS1B01G147200.1 | Wheat | plasma membrane | 27.01 | 30.08 |
| TraesCS5B01G040800.1 | Wheat | plasma membrane | 28.83 | 29.37 |
| TraesCS5B01G288600.1 | Wheat | plasma membrane | 27.74 | 26.48 |
| TraesCS4B01G166600.1 | Wheat | golgi, plasma membrane, plastid, vacuole | 29.2 | 26.4 |
| TraesCS6B01G421700.1 | Wheat | plasma membrane | 27.01 | 25.96 |
| TraesCS1B01G066900.1 | Wheat | plasma membrane | 27.01 | 25.52 |
| TraesCS6B01G421800.1 | Wheat | plasma membrane | 27.01 | 25.52 |
| TraesCS6B01G421500.1 | Wheat | plasma membrane | 27.37 | 25.51 |
| TraesCS4B01G182000.1 | Wheat | golgi, plasma membrane | 27.37 | 25.17 |
| TraesCS6B01G015200.1 | Wheat | plasma membrane | 26.64 | 24.83 |
| TraesCS6B01G015100.1 | Wheat | plasma membrane | 26.64 | 24.83 |
| TraesCS6B01G015300.1 | Wheat | golgi, plasma membrane, vacuole | 25.91 | 24.74 |
| TraesCS7B01G050500.1 | Wheat | plasma membrane | 27.01 | 24.03 |
| TraesCS7B01G160000.1 | Wheat | plasma membrane | 24.82 | 22.22 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G056000.2 | EnsemblPlantsGene:TraesCS2B01G056000 | Gene3D:1.20.1280.290 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:SWEET_sugar_transpr | PANTHER:PTHR10791 | PANTHER:PTHR10791:SF68 | PFAM:PF03083 | SEG:seg | TMHMM:TMhelix |
| MapMan:24.2.6.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:27356062..27357557
Molecular Weight (calculated)
30616.3 Da
IEP (calculated)
8.987
GRAVY (calculated)
0.626
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLILVFCLY VRRPTFWRIY KAKDVEEFKP DPYLATLMNC LLWFFYGLPI VHPNSTLVLT INGIGLVIEG AYIIIFIIYA ANNTRVHTCN PPNAPSSGLL
101: YLFGVSFCTE DPFACPNPCH VPVLRVQWKM LGVLAIEAAF MAAVVAGVLV GAHTHEKRSM IVGILCVIFG SIMYASPLTI MGKVIRTKSV EYMPFFLSLV
201: NFLNGLCWTG YALIKFDIYI TIPNALGTIF GLIQLILYFY YYKSTPRKGK NVELPTVLTK NAVTSGNVSV TVEK
101: YLFGVSFCTE DPFACPNPCH VPVLRVQWKM LGVLAIEAAF MAAVVAGVLV GAHTHEKRSM IVGILCVIFG SIMYASPLTI MGKVIRTKSV EYMPFFLSLV
201: NFLNGLCWTG YALIKFDIYI TIPNALGTIF GLIQLILYFY YYKSTPRKGK NVELPTVLTK NAVTSGNVSV TVEK
001: MVHEQLNLIR KIVGILGNFI SLCLFLSPTP TFIHIVKKKS VEKYSPLPYL ATLLNCLVRA LYGLPMVHPD STLLVTISGI GITIEIVFLT IFFVFCGRQQ
101: HRLVISAVLT VQVVFVATLA VLVLTLEHTT DQRTISVGIV SCVFNAMMYA SPLSVMKMVI KTKSLEFMPF LLSVVGFLNA GVWTIYGFVP FDPFLAIPNG
201: IGCVFGLVQL ILYGTYYKST KGIMEERKNR LGYVGEVGLS NAIAQTEPEN IPYLNKRVSG V
101: HRLVISAVLT VQVVFVATLA VLVLTLEHTT DQRTISVGIV SCVFNAMMYA SPLSVMKMVI KTKSLEFMPF LLSVVGFLNA GVWTIYGFVP FDPFLAIPNG
201: IGCVFGLVQL ILYGTYYKST KGIMEERKNR LGYVGEVGLS NAIAQTEPEN IPYLNKRVSG V
Arabidopsis Description
SWEET6Bidirectional sugar transporter SWEET6 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9M9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.