Factsheet for VIT_14s0066g01420.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 5
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_14s0066g01420.t01	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G28007.1	VIT_14s0066g01420.t01	AT3G28007.1	24027245

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G410700.1	Wheat	plasma membrane	61.42	63.41
TraesCS7D01G521400.1	Wheat	plasma membrane	60.63	63.37
TraesCS7A01G533900.1	Wheat	plasma membrane	60.63	63.37
HORVU2Hr1G006510.1	Barley	plasma membrane	60.63	62.6
TraesCS7B01G451200.1	Wheat	plasma membrane	59.84	62.55
TraesCS7B01G410800.1	Wheat	golgi, plasma membrane, vacuole	43.7	62.01
GSMUA_Achr6P09180_001	Banana	plasma membrane	57.09	61.7
EES01039	Sorghum	plasma membrane	59.06	61.48
TraesCS1A01G360900.1	Wheat	plasma membrane	59.45	61.13
VIT_17s0000g08110.t01	Wine grape	cytosol, golgi, plasma membrane	56.3	61.11
GSMUA_Achr10P...	Banana	extracellular, golgi, plasma membrane	56.3	61.11
TraesCS1D01G365200.1	Wheat	plasma membrane	59.06	60.73
TraesCS2D01G042500.1	Wheat	plasma membrane	58.66	60.57
TraesCS2D01G042600.1	Wheat	plasma membrane	58.66	60.57
TraesCSU01G162000.1	Wheat	plasma membrane	58.66	60.57
TraesCS1B01G377200.1	Wheat	plasma membrane	58.66	60.32
Os09t0256650-00	Rice	extracellular	23.23	60.2
TraesCSU01G013200.1	Wheat	plasma membrane	58.27	60.16
TraesCS2A01G043400.1	Wheat	plasma membrane	58.27	60.16
Zm00001d011299_P001	Maize	plasma membrane	57.48	60.08
TraesCS7A01G503100.1	Wheat	plasma membrane	58.27	59.92
TraesCS7A01G159800.1	Wheat	plasma membrane	57.87	59.76
TraesCSU01G181700.1	Wheat	plasma membrane	57.87	59.76
TraesCSU01G191700.1	Wheat	plasma membrane	57.87	59.76
TraesCS2B01G055900.1	Wheat	plasma membrane	57.87	59.76
TraesCS7B01G064400.1	Wheat	plasma membrane	57.87	59.76
TraesCS7B01G064600.1	Wheat	plasma membrane	57.87	59.76
TraesCS7D01G160600.1	Wheat	plasma membrane	57.87	59.76
TraesCS2B01G056100.1	Wheat	plasma membrane	57.48	59.35
TraesCS2A01G051800.1	Wheat	plasma membrane	57.48	59.35
TraesCS7B01G064300.1	Wheat	plasma membrane	57.48	59.35
TraesCS7B01G064700.1	Wheat	plasma membrane	57.48	59.35
TraesCS7B01G064800.1	Wheat	plasma membrane	48.03	59.22
Zm00001d044421_P001	Maize	plasma membrane	56.69	59.02
TraesCSU01G013400.1	Wheat	plasma membrane	57.09	58.94
TraesCS2D01G042400.1	Wheat	plasma membrane	53.94	58.8
TraesCS2B01G055700.1	Wheat	plasma membrane	53.94	58.8
TraesCS2A01G043200.1	Wheat	plasma membrane	53.94	58.8
EES20039	Sorghum	golgi, plasma membrane, vacuole	55.12	58.58
HORVU2Hr1G006520.1	Barley	peroxisome, plasma membrane, vacuole	53.54	58.37
Os01t0605700-01	Rice	golgi, plasma membrane, plastid	58.27	58.27
TraesCSU01G249100.1	Wheat	golgi, plasma membrane, vacuole	33.07	57.93
Os01t0606000-00	Rice	plasma membrane	58.66	57.53
TraesCSU01G232400.1	Wheat	plasma membrane	44.09	57.44
HORVU7Hr1G117490.1	Barley	plasma membrane	58.66	57.31
TraesCSU01G249000.1	Wheat	golgi, plasma membrane, vacuole	32.68	57.24
TraesCS2D01G052100.1	Wheat	plasma membrane	43.7	56.92
TraesCS7B01G064500.1	Wheat	plasma membrane	43.7	56.92
Bra025317.1-P	Field mustard	plasma membrane	55.51	56.85
Os05t0588500-01	Rice	golgi, plasma membrane, vacuole	52.76	56.54
TraesCS7D01G490600.1	Wheat	plasma membrane	35.83	56.17
Bra033034.1-P	Field mustard	plasma membrane	53.94	55.92
CDY49756	Canola	plasma membrane	53.94	55.92
AT3G28007.1	Thale cress	plasma membrane	55.12	55.78
CDY04003	Canola	plasma membrane	53.15	54.66
TraesCS7A01G503300.1	Wheat	plasma membrane	51.57	51.78
HORVU1Hr1G079940.2	Barley	peroxisome, plasma membrane, plastid	58.27	51.57
VIT_17s0000g08130.t01	Wine grape	golgi, plasma membrane, vacuole	31.1	51.3
TraesCS2B01G055800.1	Wheat	plasma membrane	57.48	50.69
TraesCS7A01G503200.1	Wheat	plasma membrane	52.36	50.38
VIT_02s0025g02080.t01	Wine grape	plasma membrane	51.18	50.0
Os12t0178500-00	Rice	plasma membrane	40.16	48.8
Os09t0258700-00	Rice	plasma membrane	42.52	48.65
TraesCS2B01G056000.2	Wheat	plasma membrane	52.36	48.54
TraesCS3D01G227000.1	Wheat	plasma membrane	38.19	47.78
CDX86454	Canola	plasma membrane, plastid	55.51	47.47
CDY44448	Canola	plasma membrane, plastid	55.51	46.69
VIT_18s0001g15330.t01	Wine grape	golgi, plasma membrane	38.58	39.52
VIT_05s0077g02260.t01	Wine grape	golgi, plasma membrane, vacuole	36.22	39.48
VIT_10s0003g02190.t01	Wine grape	plasma membrane	33.86	37.07
Os09t0254600-00	Rice	plastid	37.4	36.82
VIT_16s0050g02540.t01	Wine grape	plasma membrane	35.83	36.55
VIT_19s0014g00280.t01	Wine grape	golgi, plasma membrane, plastid	31.89	34.47
VIT_14s0060g01910.t01	Wine grape	golgi, plasma membrane	37.4	31.88
VIT_17s0000g00830.t01	Wine grape	plasma membrane	31.5	29.63
VIT_07s0104g01340.t01	Wine grape	golgi, plasma membrane	31.5	28.99
VIT_17s0000g00820.t01	Wine grape	plasma membrane	30.32	28.95
VIT_01s0146g00260.t01	Wine grape	golgi, plasma membrane	25.98	28.09
VIT_04s0043g00980.t01	Wine grape	golgi, plasma membrane	18.5	27.01
VIT_14s0060g01890.t01	Wine grape	plasma membrane	34.25	17.13

Protein Annotations

Gene3D:1.20.1280.290	EntrezGene:100256108	wikigene:100256108	MapMan:24.2.6.1	ProteinID:CBI34938	ProteinID:CBI34938.3
UniProt:D7TWR3	EMBL:FN596252	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0008643	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0034219	GO:GO:0051119	GO:GO:0051260	EntrezGene:LOC100256108
wikigene:LOC100256108	PFAM:PF03083	PANTHER:PTHR10791	PANTHER:PTHR10791:SF42	InterPro:SWEET_sugar_transpr	TMHMM:TMhelix
UniParc:UPI00015C9376	ArrayExpress:VIT_14s0066g01420	EnsemblPlantsGene:VIT_14s0066g01420	EnsemblPlants:VIT_14s0066g01420.t01	RefSeq:XP_002274582	RefSeq:XP_002274582.1
SEG:seg	:	:	:	:	:

Description

Bidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:D7TWR3]

Coordinates

chr14:-:27825340..27827843

Molecular Weight (calculated)

27900.6 Da

IEP (calculated)

9.666

GRAVY (calculated)

0.517

Length

254 amino acids

Sequence
(BLAST)

001: MTGADTARTV IGIIGNVISF ALFASPSPTF WRIWKKRSVE EFSPDPYLAT VMNCMFWIFY GLPVVHPNST LVVTINSIGL AVELIYLTIY FVFAPNKGRL
101: KVIGVLCLEL AFMAAVVVVT LTKLHTHASR SNLVGIFCVV FGVLMYASPL TVMKKVITTK SVEYMPFYLS LTNFLNGVIW LTYALIQFDL YITIGNGLGA
201: VSGAIQLILY ACYYKSTPKD KEGKEKGKSS EVELASPKRL NKPTPQATAA NTAA

Best Arabidopsis Sequence Match ( AT5G62850.1 )
(BLAST)

001: MTDPHTARTI VGIVGNVISF GLFCAPIPTM VKIWKMKSVS EFKPDPYVAT VLNCMMWTFY GLPFVQPDSL LVITINGTGL FMELVYVTIF FVFATSPVRR
101: KITIAMVIEV IFMAVVIFCT MYFLHTTKQR SMLIGILCIV FNVIMYAAPL TVMKLVIKTK SVKYMPFFLS LANFMNGVVW VIYACLKFDP YILIPNGLGS
201: LSGIIQLIIY ITYYKTTNWN DDDEDKEKRY SNAGIELGQA

Arabidopsis Description

SWEET5Bidirectional sugar transporter SWEET5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM10]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.