Factsheet for VIT_10s0003g02190.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 6
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400018642	Potato	extracellular	72.84	72.84
Solyc03g005880.2.1	Tomato	plasma membrane	73.71	72.15
Solyc02g071520.2.1	Tomato	plasma membrane	71.55	70.64
GSMUA_Achr1P25290_001	Banana	plasma membrane, plastid	69.4	67.08
VIT_19s0014g00280.t01	Wine grape	golgi, plasma membrane, plastid	63.79	62.98
Os01t0541800-01	Rice	plasma membrane	65.09	62.14
TraesCS6A01G148600.1	Wheat	plasma membrane	62.93	61.09
KXG32677	Sorghum	golgi, plasma membrane, vacuole	63.79	60.91
TraesCS6B01G176800.1	Wheat	plasma membrane	62.5	60.67
TraesCS6D01G138000.1	Wheat	plasma membrane	62.5	60.67
GSMUA_Achr1P12680_001	Banana	nucleus	66.38	55.8
HORVU6Hr1G029520.4	Barley	plastid	62.07	46.6
VIT_18s0001g15330.t01	Wine grape	golgi, plasma membrane	42.24	39.52
VIT_17s0000g08110.t01	Wine grape	cytosol, golgi, plasma membrane	39.22	38.89
VIT_17s0000g08130.t01	Wine grape	golgi, plasma membrane, vacuole	25.43	38.31
VIT_05s0077g02260.t01	Wine grape	golgi, plasma membrane, vacuole	34.48	34.33
VIT_14s0066g01420.t01	Wine grape	plasma membrane	37.07	33.86
VIT_16s0050g02540.t01	Wine grape	plasma membrane	35.78	33.33
VIT_02s0025g02080.t01	Wine grape	plasma membrane	36.21	32.31
VIT_14s0060g01910.t01	Wine grape	golgi, plasma membrane	35.34	27.52
VIT_07s0104g01340.t01	Wine grape	golgi, plasma membrane	32.33	27.17
VIT_17s0000g00830.t01	Wine grape	plasma membrane	30.6	26.3
VIT_01s0146g00260.t01	Wine grape	golgi, plasma membrane	26.29	25.96
VIT_04s0043g00980.t01	Wine grape	golgi, plasma membrane	19.4	25.86
VIT_17s0000g00820.t01	Wine grape	plasma membrane	29.31	25.56
VIT_14s0060g01890.t01	Wine grape	plasma membrane	33.62	15.35

Protein Annotations

Gene3D:1.20.1280.290	EntrezGene:100262300	wikigene:100262300	MapMan:24.2.6.1	ProteinID:CBI30772	ProteinID:CBI30772.3
UniProt:D7TJV0	EMBL:FN595992	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0008643	GO:GO:0016020	GO:GO:0016021
GO:GO:0034219	GO:GO:0051119	EntrezGene:LOC100262300	wikigene:LOC100262300	PFAM:PF03083	PANTHER:PTHR10791
PANTHER:PTHR10791:SF57	InterPro:SWEET_sugar_transpr	TMHMM:TMhelix	UniParc:UPI00015CC4C5	ArrayExpress:VIT_10s0003g02190	EnsemblPlantsGene:VIT_10s0003g02190
EnsemblPlants:VIT_10s0003g02190.t01	unigene:Vvi.26457	RefSeq:XP_002269484	RefSeq:XP_002269484.1	SEG:seg	:

Description

Bidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:D7TJV0]

Coordinates

chr10:+:3961162..3964095

Molecular Weight (calculated)

25779.1 Da

IEP (calculated)

8.790

GRAVY (calculated)

0.839

Length

232 amino acids

Sequence
(BLAST)

001: MSSVYSVCCD AAGIAGNLSA FVLFVSPIPT FRRIIRNGST EQFSGLPYIY ALLNCLICLW YGMPLVSPGI ILVATVNSVG AIFQLIYIGI FITFAEKAKK
101: MKMSGLLTAI FGIYAIIVFA SMKLFDPHAR QLFVGYLSVA SLISMFASPL FIINLVIRTR SVEYMPFYLS LSTFLMSLSF FTYGMFKHDP FIYVPNGIGT
201: ILGVVQLVLY AYYSRTSTED LGLRESFIES YA

Best Arabidopsis Sequence Match ( AT3G14770.1 )
(BLAST)

001: MDVFAFNASL SMCKDVAGIA GNIFAFGLFV SPMPTFRRIM RNKSTEQFSG LPYIYALLNC LICLWYGTPF ISHSNAMLMT VNSVGATFQL CYIILFIMHT
101: DKKNKMKMLG LLFVVFAVVG VIVAGSLQIP DQLTRWYFVG FLSCGSLVSM FASPLFVINL VIRTKSVEFM PFYLSLSTFL MSASFLLYGL FNSDAFVYTP
201: NGIGTILGIV QLALYCYYHR NSIEEETKEP LIVSYV

Arabidopsis Description

SWEET2Bidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:A0A178VM79]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.