Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_05s0077g02260.t01 | Wine grape | golgi, plasma membrane, vacuole | 28.94 | 63.09 |
| GSMUA_Achr8P10260_001 | Banana | plasma membrane | 24.8 | 51.85 |
| OQU86800 | Sorghum | golgi, plasma membrane, vacuole | 24.21 | 50.83 |
| Zm00001d040656_P002 | Maize | golgi, plasma membrane, vacuole | 22.64 | 50.66 |
| Zm00001d009071_P002 | Maize | plasma membrane | 23.82 | 50.63 |
| TraesCS5B01G040700.1 | Wheat | golgi, plasma membrane, vacuole | 24.02 | 49.8 |
| TraesCS5D01G046300.1 | Wheat | plasma membrane | 24.02 | 49.8 |
| TraesCS5A01G038900.1 | Wheat | plasma membrane | 23.82 | 48.4 |
| TraesCS5A01G039000.1 | Wheat | plasma membrane | 23.62 | 48.0 |
| HORVU0Hr1G010080.2 | Barley | plasma membrane | 24.41 | 46.1 |
| TraesCS5B01G040800.1 | Wheat | plasma membrane | 24.41 | 46.1 |
| TraesCS5D01G046400.1 | Wheat | plasma membrane | 23.82 | 44.98 |
| VIT_14s0060g01910.t01 | Wine grape | golgi, plasma membrane | 24.8 | 42.28 |
| GSMUA_Achr11P... | Banana | plasma membrane | 23.43 | 40.2 |
| VIT_17s0000g08110.t01 | Wine grape | cytosol, golgi, plasma membrane | 17.13 | 37.18 |
| VIT_18s0001g15330.t01 | Wine grape | golgi, plasma membrane | 17.91 | 36.69 |
| VIT_17s0000g08130.t01 | Wine grape | golgi, plasma membrane, vacuole | 10.83 | 35.71 |
| VIT_02s0025g02080.t01 | Wine grape | plasma membrane | 17.72 | 34.62 |
| VIT_16s0050g02540.t01 | Wine grape | plasma membrane | 16.93 | 34.54 |
| VIT_19s0014g00280.t01 | Wine grape | golgi, plasma membrane, plastid | 15.94 | 34.47 |
| VIT_14s0066g01420.t01 | Wine grape | plasma membrane | 17.13 | 34.25 |
| VIT_10s0003g02190.t01 | Wine grape | plasma membrane | 15.35 | 33.62 |
| VIT_17s0000g00830.t01 | Wine grape | plasma membrane | 17.13 | 32.22 |
| VIT_07s0104g01340.t01 | Wine grape | golgi, plasma membrane | 16.93 | 31.16 |
| VIT_04s0043g00980.t01 | Wine grape | golgi, plasma membrane | 10.63 | 31.03 |
| VIT_01s0146g00260.t01 | Wine grape | golgi, plasma membrane | 13.98 | 30.21 |
| VIT_17s0000g00820.t01 | Wine grape | plasma membrane | 15.55 | 29.7 |
Protein Annotations
| Gene3D:1.20.1280.290 | EntrezGene:100245867 | wikigene:100245867 | MapMan:24.2.6.1 | ProteinID:CCB61876 | ProteinID:CCB61876.1 |
| UniProt:F6I4N9 | EMBL:FN596746 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0008643 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034219 | GO:GO:0051119 |
| EntrezGene:LOC100245867 | wikigene:LOC100245867 | PFAM:PF03083 | PANTHER:PTHR10791 | PANTHER:PTHR10791:SF29 | InterPro:SWEET_sugar_transpr |
| TMHMM:TMhelix | UniParc:UPI000210A896 | ArrayExpress:VIT_14s0060g01890 | EnsemblPlantsGene:VIT_14s0060g01890 | EnsemblPlants:VIT_14s0060g01890.t01 | RefSeq:XP_002278982 |
| RefSeq:XP_002278982.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr14:-:1525182..1535425
Molecular Weight (calculated)
56999.3 Da
IEP (calculated)
8.820
GRAVY (calculated)
0.697
Length
508 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGLSFFVGV IGNIISVTVV LSPIKTFLRI VKHRSTEDFE SFPYVIALLG TSLWCYYGVI KPGGFILATT NGLGIIIELV YVTLFIIYAP LRVRAKTAIY
101: LGILNVAVPA IVILITLFTM HGDLRIDVLG FVCAGLSIVM YGSPLVVVKR VLTTKSVEYM PFLLSFFFFL NGGIWTVYAI LVKDFFLGVP NGIGFLLGTA
201: QMVLYAMYWK SKSSQNISEE CQMGLDFFLE QLRWCSMPYT GNLSHPKIFQ SWRMDGNTSI SYPKTVLKTR CLTFMEERKE KNWNIISVLY MLSPVPTFSR
301: IVKHRSTEEF ESLPYVSSLA TSSLWVFYGL MKSGGLLIAT VNGFGIIIEL VYVILFLIFA PTRMRAKTAI LVVTLNVGFP AGVVLITLIV MDGDLRLDVL
401: GIVCAVLNIL MYGSPFTAMK KVVMTKSVEY MPFLLSFFLL LNGAIWTFYA ILVKDFFVGV PNGIGFILGA AQIVLYAMYW KSKTSQNLSD VLEDEWQHKL
501: LIHENSEE
101: LGILNVAVPA IVILITLFTM HGDLRIDVLG FVCAGLSIVM YGSPLVVVKR VLTTKSVEYM PFLLSFFFFL NGGIWTVYAI LVKDFFLGVP NGIGFLLGTA
201: QMVLYAMYWK SKSSQNISEE CQMGLDFFLE QLRWCSMPYT GNLSHPKIFQ SWRMDGNTSI SYPKTVLKTR CLTFMEERKE KNWNIISVLY MLSPVPTFSR
301: IVKHRSTEEF ESLPYVSSLA TSSLWVFYGL MKSGGLLIAT VNGFGIIIEL VYVILFLIFA PTRMRAKTAI LVVTLNVGFP AGVVLITLIV MDGDLRLDVL
401: GIVCAVLNIL MYGSPFTAMK KVVMTKSVEY MPFLLSFFLL LNGAIWTFYA ILVKDFFVGV PNGIGFILGA AQIVLYAMYW KSKTSQNLSD VLEDEWQHKL
501: LIHENSEE
001: MAEASFYIGV IGNVISVLVF LSPVETFWKI VKRRSTEEYK SLPYICTLLG SSLWTYYGIV TPGEYLVSTV NGFGALVETI YVSLFLFYAP RHLKLKTVDV
101: EAMLNVFFPI AAIVATRSAF EDEKMRSQSI GFISAGLNII MYGSPLSAMK TVVTTKSVKY MPFWLSFFLF LNGAIWAVYA LLQHDVFLLV PNGVGFVFGT
201: MQLILYGIYR NAKPVGLSNG LSEIAQDEEE GLTSRVEPLL S
101: EAMLNVFFPI AAIVATRSAF EDEKMRSQSI GFISAGLNII MYGSPLSAMK TVVTTKSVKY MPFWLSFFLF LNGAIWAVYA LLQHDVFLLV PNGVGFVFGT
201: MQLILYGIYR NAKPVGLSNG LSEIAQDEEE GLTSRVEPLL S
Arabidopsis Description
SWEET17Nodulin MtN3 family protein [Source:TAIR;Acc:AT4G15920]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.