Factsheet for VIT_04s0043g00980.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g08130.t01	Wine grape	golgi, plasma membrane, vacuole	24.14	27.27
VIT_07s0104g01340.t01	Wine grape	golgi, plasma membrane	39.66	25.0
VIT_17s0000g00830.t01	Wine grape	plasma membrane	35.63	22.96
VIT_05s0077g02260.t01	Wine grape	golgi, plasma membrane, vacuole	30.46	22.75
VIT_18s0001g15330.t01	Wine grape	golgi, plasma membrane	29.89	20.97
VIT_19s0014g00280.t01	Wine grape	golgi, plasma membrane, plastid	27.59	20.43
VIT_17s0000g08110.t01	Wine grape	cytosol, golgi, plasma membrane	27.01	20.09
VIT_16s0050g02540.t01	Wine grape	plasma membrane	28.74	20.08
VIT_01s0146g00260.t01	Wine grape	golgi, plasma membrane	27.01	20.0
VIT_02s0025g02080.t01	Wine grape	plasma membrane	29.31	19.62
VIT_10s0003g02190.t01	Wine grape	plasma membrane	25.86	19.4
VIT_17s0000g00820.t01	Wine grape	plasma membrane	28.74	18.8
VIT_14s0066g01420.t01	Wine grape	plasma membrane	27.01	18.5
VIT_14s0060g01910.t01	Wine grape	golgi, plasma membrane	31.03	18.12
KRH68111	Soybean	plasma membrane	30.46	16.77
VIT_14s0060g01890.t01	Wine grape	plasma membrane	31.03	10.63

Protein Annotations

Gene3D:1.20.1280.290	EntrezGene:100252709	wikigene:100252709	MapMan:24.2.6.1	EMBL:AM481880	ProteinID:CAN75290
ProteinID:CAN75290.1	ProteinID:CCB51883	ProteinID:CCB51883.1	UniProt:F6HI37	EMBL:FN595763	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0008643	GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100252709
wikigene:LOC100252709	PFAM:PF03083	PANTHER:PTHR10791	PANTHER:PTHR10791:SF52	InterPro:SWEET_sugar_transpr	TMHMM:TMhelix
UniParc:UPI00021092EF	ArrayExpress:VIT_04s0043g00980	EnsemblPlantsGene:VIT_04s0043g00980	EnsemblPlants:VIT_04s0043g00980.t01	RefSeq:XP_002267792	RefSeq:XP_002267792.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4:+:15645934..15646649

Molecular Weight (calculated)

20019.7 Da

IEP (calculated)

5.670

GRAVY (calculated)

0.409

Length

174 amino acids

Sequence
(BLAST)

001: MILILNVASL GLVLLLTTLF SKGKTRIQVV GWISAGVNIG TFVAPLSIIK RVIETRSVEY MPFNLSFFLT ICATMWFFYG IFVRDFFIAI PNVVGFVFGI
101: AQMFLYIIYK YMMKSDETTL EQLEETTERP LYVPTANHEP SGQELKAVTI TSPRQVDYFT EHHPMFMERD EYLS

Best Arabidopsis Sequence Match ( AT5G13170.1 )
(BLAST)

001: MGVMINHHFL AFIFGILGNV ISFLVFLAPV PTFYRIYKRK STESFQSLPY QVSLFSCMLW LYYALIKKDA FLLITINSFG CVVETLYIAM FFAYATREKR
101: ISAMKLFIAM NVAFFSLILM VTHFVVKTPP LQVSVLGWIC VAISVSVFAA PLMIVARVIK TKSVEYMPFT LSFFLTISAV MWFAYGLFLN DICIAIPNVV
201: GFVLGLLQMV LYLVYRNSNE KPEKINSSEQ QLKSIVVMSP LGVSEVHPVV TESVDPLSEA VHHEDLSKVT KVEEPSIENG KCYVEATRPE TV

Arabidopsis Description

SWEET15Bidirectional sugar transporter SWEET15 [Source:UniProtKB/Swiss-Prot;Acc:Q9FY94]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.