Factsheet for Os05t0588500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0226300-01
Os01t0605700-01	plasma membrane, plasma membrane
Os01t0606000-00	plasma membrane, plasma membrane
Os01t0736900-01
Os02t0265900-01
Os05t0526400-01
Os05t0588500-01	plasma membrane, plasma membrane
Os06t0503400-01
Os09t0254600-00	plasma membrane, plasma membrane
Os09t0256650-00	plasma membrane, plasma membrane
Os09t0258700-00	plasma membrane, plasma membrane
Os12t0178500-00	plasma membrane, plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G28007.1	Os01t0605700-01	AT3G28007.1	24027245
AT3G28007.1	Os01t0606000-00	AT3G28007.1	24027245
AT3G28007.1	Os05t0588500-01	AT3G28007.1	24027245
AT3G28007.1	Os09t0254600-00	AT3G28007.1	24027245
AT3G28007.1	Os09t0256650-00	AT3G28007.1	24027245
AT3G28007.1	Os09t0258700-00	AT3G28007.1	24027245
AT3G28007.1	Os12t0178500-00	AT3G28007.1	24027245
AT5G40260.1	Os01t0605700-01	AT5G40260.1	24027245
AT5G40260.1	Os01t0606000-00	AT5G40260.1	24027245
AT5G40260.1	Os05t0588500-01	AT5G40260.1	24027245
AT5G40260.1	Os09t0254600-00	AT5G40260.1	24027245
AT5G40260.1	Os09t0256650-00	AT5G40260.1	24027245
AT5G40260.1	Os09t0258700-00	AT5G40260.1	24027245
AT5G40260.1	Os12t0178500-00	AT5G40260.1	24027245
AT5G40260.1	Os01t0226300-01	AT5G41600.1	21798944
AT5G40260.1	Os01t0736900-01	AT5G41600.1	21798944
AT5G40260.1	Os02t0265900-01	AT5G41600.1	21798944
AT5G40260.1	Os05t0526400-01	AT5G41600.1	21798944
AT5G40260.1	Os06t0503400-01	AT5G41600.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES20039	Sorghum	golgi, plasma membrane, vacuole	76.37	75.73
Os09t0256650-00	Rice	extracellular	27.0	65.31
Os01t0605700-01	Rice	golgi, plasma membrane, plastid	65.82	61.42
Os01t0606000-00	Rice	plasma membrane	67.09	61.39
GSMUA_Achr10P...	Banana	extracellular, golgi, plasma membrane	60.34	61.11
GSMUA_Achr6P09180_001	Banana	plasma membrane	59.92	60.43
VIT_17s0000g08110.t01	Wine grape	cytosol, golgi, plasma membrane	56.96	57.69
Os09t0258700-00	Rice	plasma membrane	51.9	55.41
Os12t0178500-00	Rice	plasma membrane	47.68	54.07
Bra025317.1-P	Field mustard	plasma membrane	56.12	53.63
AT3G28007.1	Thale cress	plasma membrane	56.12	52.99
KRG93335	Soybean	plasma membrane	54.85	52.85
VIT_14s0066g01420.t01	Wine grape	plasma membrane	56.54	52.76
Bra033034.1-P	Field mustard	plasma membrane	53.59	51.84
KRH20314	Soybean	plasma membrane	53.59	51.84
CDY49756	Canola	plasma membrane	53.59	51.84
CDY04003	Canola	plasma membrane	53.59	51.42
Solyc03g114200.2.1	Tomato	golgi, plasma membrane, plastid	51.05	51.27
PGSC0003DMT400069697	Potato	cytosol, golgi, plasma membrane	51.48	51.26
CDY16757	Canola	extracellular, peroxisome, plasma membrane	51.48	50.83
CDY56741	Canola	plasma membrane	51.48	50.83
KRG93333	Soybean	plasma membrane	52.74	50.81
Solyc06g071400.2.1	Tomato	cytosol, golgi, plasma membrane	50.63	50.42
Bra035879.1-P	Field mustard	extracellular, golgi, plasma membrane	51.05	50.42
AT5G62850.1	Thale cress	plasma membrane	49.79	49.17
KRH57053	Soybean	plasma membrane	46.84	49.12
Os02t0301100-01	Rice	plasma membrane	53.59	49.03
KRH03315	Soybean	golgi, plasma membrane, plastid	46.41	48.67
CDY30733	Canola	extracellular, golgi, plasma membrane	48.52	47.92
Bra029245.1-P	Field mustard	extracellular, golgi, plasma membrane	48.52	47.92
Solyc02g086920.1.1	Tomato	golgi, plasma membrane	46.84	47.64
CDY45751	Canola	extracellular, golgi, plasma membrane	48.1	47.5
CDY30734	Canola	plasma membrane	46.84	46.25
Bra029244.1-P	Field mustard	plasma membrane	46.84	46.25
PGSC0003DMT400001425	Potato	golgi, plasma membrane	35.02	45.86
CDX86454	Canola	plasma membrane, plastid	56.54	45.12
CDY36831	Canola	plasma membrane	44.3	44.12
CDY44448	Canola	plasma membrane, plastid	56.12	44.04
AT5G40260.1	Thale cress	plasma membrane	44.3	43.93
CDY44578	Canola	plasma membrane	43.46	43.28
VIT_17s0000g08130.t01	Wine grape	golgi, plasma membrane, vacuole	27.85	42.86
Bra025595.1-P	Field mustard	plasma membrane	43.04	42.86
CDX84358	Canola	plasma membrane	36.29	41.15
Solyc11g028270.1.1	Tomato	extracellular	30.8	40.78
Os05t0426000-01	Rice	plasma membrane	43.46	39.46
Os01t0881300-02	Rice	plasma membrane	43.88	38.1
Os09t0254600-00	Rice	plastid	41.35	37.98
Os01t0541800-01	Rice	plasma membrane	36.71	35.8
Os01t0700100-01	Rice	endoplasmic reticulum, plasma membrane, vacuole	34.6	35.65
CDY45750	Canola	cytosol, golgi, plasma membrane	41.77	34.26
Os03t0347500-01	Rice	golgi, plasma membrane	33.76	26.67
Os05t0214300-00	Rice	golgi, plasma membrane	28.69	26.15
Os02t0513100-01	Rice	golgi, plasma membrane, plastid	34.6	25.71
Os12t0476200-01	Rice	extracellular, golgi	32.07	25.68
Os11t0508600-01	Rice	golgi, plasma membrane	30.8	24.09
Os09t0508250-00	Rice	extracellular, golgi	17.72	24.0
Os03t0341300-01	Rice	plasma membrane	25.32	23.62
Os08t0535200-01	Rice	golgi, plasma membrane, plastid	29.11	22.48

Protein Annotations

Gene3D:1.20.1280.290	MapMan:24.2.6.1	EntrezGene:4339772	ProteinID:AAT37996.1	ProteinID:AAT44168.1	EMBL:AK069614
ProteinID:BAF18389.1	ProteinID:BAS95600.1	ProteinID:EEE64873.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0005887	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008643	GO:GO:0009719	GO:GO:0009734	GO:GO:0009987	GO:GO:0010930
GO:GO:0015757	GO:GO:0016020	GO:GO:0016021	GO:GO:0051119	GO:GO:0060918	EnsemblPlantsGene:Os05g0588500
EnsemblPlants:Os05t0588500-01	PFAM:PF03083	PANTHER:PTHR10791	PANTHER:PTHR10791:SF68	UniProt:Q6L568	InterPro:SWEET_sugar_transpr
TMHMM:TMhelix	UniParc:UPI0000376BE1	RefSeq:XP_015638818.1	SEG:seg	:	:

Description

SWEET5Sugar transporter, Galactose transport (Os05t0588500-01)

Coordinates

chr5:-:29313057..29314868

Molecular Weight (calculated)

25918.4 Da

IEP (calculated)

8.174

GRAVY (calculated)

0.798

Length

237 amino acids

Sequence
(BLAST)

001: MVMNPDAVRN VVGIIGNLIS FGLFLSPLPT FVTIVKKKDV EEFVPDPYLA TFLNCALWVF YGLPFIHPNS ILVVTINGTG LLIEIAYLAI YFAYAPKPKR
101: CRMLGVLTVE LVFLAAVAAG VLLGAHTYDK RSLIVGTLCV FFGTLMYAAP LTIMKQVIAT KSVEYMPFTL SLVSFINGIC WTIYAFIRFD ILITIPNGMG
201: TLLGAAQLIL YFCYYDGSTA KNKGALELPK DGDSSAV

Best Arabidopsis Sequence Match ( AT3G28007.1 )
(BLAST)

001: MVNATVARNI AGICGNVISL FLFLSPIPTF ITIYKKKKVE EYKADPYLAT VLNCALWVFY GLPMVQPDSL LVITINGTGL AIELVYLAIF FFFSPTSRKV
101: KVGLWLIGEM VFVGIVATCT LLLFHTHNQR SSFVGIFCVI FVSLMYIAPL TIMSKVIKTK SVKYMPFSLS LANFLNGVVW VIYALIKFDL FILIGNGLGT
201: VSGAVQLILY ACYYKTTPKD DEDEEDEENL SKVNSQLQLS GNSGQAKRVS A

Arabidopsis Description

SWEET4Bidirectional sugar transporter SWEET4 [Source:UniProtKB/Swiss-Prot;Acc:Q944M5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.