Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0588500-01 | Rice | golgi, plasma membrane, vacuole | 75.73 | 76.37 |
| EES01039 | Sorghum | plasma membrane | 65.27 | 63.93 |
| GSMUA_Achr10P... | Banana | extracellular, golgi, plasma membrane | 61.09 | 62.39 |
| GSMUA_Achr6P09180_001 | Banana | plasma membrane | 58.58 | 59.57 |
| VIT_17s0000g08110.t01 | Wine grape | cytosol, golgi, plasma membrane | 55.65 | 56.84 |
| VIT_14s0066g01420.t01 | Wine grape | plasma membrane | 58.58 | 55.12 |
| Bra025317.1-P | Field mustard | plasma membrane | 56.49 | 54.44 |
| CDY49756 | Canola | plasma membrane | 55.23 | 53.88 |
| Bra033034.1-P | Field mustard | plasma membrane | 55.23 | 53.88 |
| AT3G28007.1 | Thale cress | plasma membrane | 55.65 | 52.99 |
| CDY04003 | Canola | plasma membrane | 54.39 | 52.63 |
| KRG93335 | Soybean | plasma membrane | 53.56 | 52.03 |
| PGSC0003DMT400069697 | Potato | cytosol, golgi, plasma membrane | 51.46 | 51.68 |
| KRH20314 | Soybean | plasma membrane | 52.72 | 51.43 |
| Solyc06g071400.2.1 | Tomato | cytosol, golgi, plasma membrane | 51.05 | 51.26 |
| EES06723 | Sorghum | golgi, plasma membrane, plastid | 53.56 | 51.2 |
| EES06744 | Sorghum | golgi, plasma membrane, plastid | 53.56 | 51.2 |
| KRG93333 | Soybean | plasma membrane | 51.88 | 50.41 |
| Solyc03g114200.2.1 | Tomato | golgi, plasma membrane, plastid | 49.37 | 50.0 |
| CDY16757 | Canola | extracellular, peroxisome, plasma membrane | 50.21 | 50.0 |
| CDY56741 | Canola | plasma membrane | 49.79 | 49.58 |
| Bra035879.1-P | Field mustard | extracellular, golgi, plasma membrane | 49.79 | 49.58 |
| KRH03315 | Soybean | golgi, plasma membrane, plastid | 46.44 | 49.12 |
| Solyc02g086920.1.1 | Tomato | golgi, plasma membrane | 47.7 | 48.93 |
| AT5G62850.1 | Thale cress | plasma membrane | 48.95 | 48.75 |
| CDY30733 | Canola | extracellular, golgi, plasma membrane | 48.54 | 48.33 |
| Bra029245.1-P | Field mustard | extracellular, golgi, plasma membrane | 48.54 | 48.33 |
| CDY44578 | Canola | plasma membrane | 48.12 | 48.32 |
| CDY36831 | Canola | plasma membrane | 48.12 | 48.32 |
| CDY45751 | Canola | extracellular, golgi, plasma membrane | 48.12 | 47.92 |
| Bra025595.1-P | Field mustard | plasma membrane | 47.7 | 47.9 |
| KRH57053 | Soybean | plasma membrane | 45.19 | 47.79 |
| AT5G40260.1 | Thale cress | plasma membrane | 47.28 | 47.28 |
| PGSC0003DMT400001425 | Potato | golgi, plasma membrane | 35.56 | 46.96 |
| Bra029244.1-P | Field mustard | plasma membrane | 46.44 | 46.25 |
| CDY30734 | Canola | plasma membrane | 46.44 | 46.25 |
| VIT_17s0000g08130.t01 | Wine grape | golgi, plasma membrane, vacuole | 29.71 | 46.1 |
| CDX86454 | Canola | plasma membrane, plastid | 56.49 | 45.45 |
| OQU84855 | Sorghum | plasma membrane | 49.37 | 45.04 |
| CDY44448 | Canola | plasma membrane, plastid | 56.07 | 44.37 |
| EES19554 | Sorghum | golgi, plasma membrane | 43.1 | 40.23 |
| CDX84358 | Canola | plasma membrane | 35.15 | 40.19 |
| KXG33819 | Sorghum | extracellular, golgi | 45.19 | 40.15 |
| Solyc11g028270.1.1 | Tomato | extracellular | 28.87 | 38.55 |
| OQU86800 | Sorghum | golgi, plasma membrane, vacuole | 38.49 | 38.02 |
| EES01331 | Sorghum | endoplasmic reticulum, plasma membrane, plastid | 36.4 | 37.66 |
| KXG32677 | Sorghum | golgi, plasma membrane, vacuole | 36.4 | 35.8 |
| EES00047 | Sorghum | plasma membrane | 38.49 | 35.52 |
| CDY45750 | Canola | cytosol, golgi, plasma membrane | 41.0 | 33.91 |
| KXG21564 | Sorghum | plasma membrane | 30.96 | 30.08 |
| OQU89754 | Sorghum | plastid | 33.05 | 28.94 |
| EER94881 | Sorghum | golgi, plasma membrane | 37.66 | 27.36 |
| EES17001 | Sorghum | golgi, plasma membrane | 32.22 | 25.33 |
| EES15957 | Sorghum | golgi, plasma membrane | 31.8 | 25.17 |
| OQU79094 | Sorghum | plasma membrane | 31.8 | 24.2 |
| KXG28442 | Sorghum | golgi, plasma membrane | 28.87 | 23.88 |
| EES14183 | Sorghum | plastid | 30.54 | 23.62 |
| EER92278 | Sorghum | golgi, plasma membrane | 30.54 | 23.32 |
| EES06868 | Sorghum | golgi, plasma membrane, plastid | 32.64 | 23.21 |
Protein Annotations
| Gene3D:1.20.1280.290 | MapMan:24.2.6.1 | EntrezGene:8066545 | UniProt:C5YWN0 | EnsemblPlants:EES20039 | ProteinID:EES20039 |
| ProteinID:EES20039.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008643 | GO:GO:0009719 |
| GO:GO:0009987 | GO:GO:0010930 | GO:GO:0015757 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034219 |
| GO:GO:0051119 | GO:GO:0060918 | PFAM:PF03083 | PANTHER:PTHR10791 | PANTHER:PTHR10791:SF68 | EnsemblPlantsGene:SORBI_3009G252000 |
| InterPro:SWEET_sugar_transpr | unigene:Sbi.9876 | TMHMM:TMhelix | UniParc:UPI0001A893CA | RefSeq:XP_002441609.1 | SEG:seg |
Description
hypothetical protein
Coordinates
chr9:-:58676498..58678201
Molecular Weight (calculated)
25932.2 Da
IEP (calculated)
7.376
GRAVY (calculated)
0.756
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNLDEVRNV VGIIGNFISF GLFLAPLPTF LTIIKKRDVE EFVPDPYLAT FLNCALWVFY GLPVVHPDSI LVATINGTGL AIEAAYLSVF FAFAPKPKRA
101: KMLGVLAVEV AFVAAVVAGV VLGAHTHEKR SLVVGCLCVL FGTLMYASPL TVMKKVIATQ SVEYMPFTLS FVSFLNGICW TTYALIRFDI FITIPNGMGT
201: LLGLMQLILY FYYYGSTPKS SGTTAGMELP VKAGDGDSN
101: KMLGVLAVEV AFVAAVVAGV VLGAHTHEKR SLVVGCLCVL FGTLMYASPL TVMKKVIATQ SVEYMPFTLS FVSFLNGICW TTYALIRFDI FITIPNGMGT
201: LLGLMQLILY FYYYGSTPKS SGTTAGMELP VKAGDGDSN
001: MVNATVARNI AGICGNVISL FLFLSPIPTF ITIYKKKKVE EYKADPYLAT VLNCALWVFY GLPMVQPDSL LVITINGTGL AIELVYLAIF FFFSPTSRKV
101: KVGLWLIGEM VFVGIVATCT LLLFHTHNQR SSFVGIFCVI FVSLMYIAPL TIMSKVIKTK SVKYMPFSLS LANFLNGVVW VIYALIKFDL FILIGNGLGT
201: VSGAVQLILY ACYYKTTPKD DEDEEDEENL SKVNSQLQLS GNSGQAKRVS A
101: KVGLWLIGEM VFVGIVATCT LLLFHTHNQR SSFVGIFCVI FVSLMYIAPL TIMSKVIKTK SVKYMPFSLS LANFLNGVVW VIYALIKFDL FILIGNGLGT
201: VSGAVQLILY ACYYKTTPKD DEDEEDEENL SKVNSQLQLS GNSGQAKRVS A
Arabidopsis Description
SWEET4Bidirectional sugar transporter SWEET4 [Source:UniProtKB/Swiss-Prot;Acc:Q944M5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.