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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:
  • nucleus 2
  • plastid 3
  • golgi 4
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, plastid
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:plastid
MultiLoc:golgi
Plant-mPloc:golgi, nucleus
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
EES06868 plasma membrane
EES14183 plasma membrane
EES15957 plasma membrane
EES17001 plasma membrane
KXG28442 plasma membrane
OQU79094 plasma membrane
OQU89754 plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48740.1 EES06868 AT3G48740.1 24027245
AT3G48740.1 EES14183 AT3G48740.1 24027245
AT3G48740.1 EES15957 AT3G48740.1 24027245
AT3G48740.1 EES17001 AT3G48740.1 24027245
AT3G48740.1 KXG28442 AT3G48740.1 24027245
AT3G48740.1 OQU79094 AT3G48740.1 24027245
AT3G48740.1 OQU89754 AT3G48740.1 24027245
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d050577_P001 Maize plasma membrane 76.19 84.21
Zm00001d016590_P001 Maize plasma membrane 76.79 79.63
TraesCS7B01G050500.1 Wheat plasma membrane 66.96 73.05
TraesCS7A01G147300.1 Wheat plasma membrane 66.96 72.58
TraesCS7D01G149000.1 Wheat plasma membrane 66.96 72.58
HORVU7Hr1G030160.1 Barley plasma membrane 66.96 71.89
Os02t0513100-01 Rice golgi, plasma membrane, plastid 67.86 71.47
KRH63814 Soybean extracellular 17.86 61.86
KRH54141 Soybean plasma membrane 41.67 54.26
KRH54140 Soybean plasma membrane 41.67 53.85
CDY69440 Canola plasma membrane 34.23 53.74
KXG28442 Sorghum golgi, plasma membrane 46.13 53.63
KRH63811 Soybean plasma membrane 40.77 53.1
KRH59785 Soybean endoplasmic reticulum, plasma membrane 40.18 52.53
KRH41097 Soybean golgi, plasma membrane 39.58 52.36
VIT_17s0000g00830.t01 Wine grape plasma membrane 41.96 52.22
KRH01827 Soybean golgi, plasma membrane 40.77 51.12
EES15957 Sorghum golgi, plasma membrane 45.54 50.66
KRH01828 Soybean plasma membrane 40.77 50.55
KRH46856 Soybean plasma membrane 40.77 50.37
KRH42232 Soybean endoplasmic reticulum, plasma membrane 41.07 50.37
KRH46857 Soybean golgi, plasma membrane 40.77 50.18
Solyc03g097610.2.1 Tomato golgi, plasma membrane 41.96 50.0
Solyc06g072620.2.1 Tomato golgi, plasma membrane 42.56 49.83
PGSC0003DMT400081210 Potato golgi, plasma membrane 43.75 49.66
KRH63812 Soybean endoplasmic reticulum, golgi, plasma membrane 41.37 49.29
Solyc03g097870.2.1 Tomato golgi, plasma membrane 43.75 49.0
Solyc03g097590.2.1 Tomato golgi, plasma membrane 43.45 48.99
PGSC0003DMT400081212 Potato golgi, plasma membrane 41.67 48.95
CDX92666 Canola golgi, plasma membrane 39.58 48.72
CDY11047 Canola golgi, plasma membrane 39.58 48.72
CDY24854 Canola golgi, plasma membrane 39.29 48.71
EES17001 Sorghum golgi, plasma membrane 44.05 48.68
Solyc03g097580.2.1 Tomato golgi, plasma membrane 43.75 48.68
Bra010477.1-P Field mustard golgi, plasma membrane 39.29 48.53
KRH58347 Soybean golgi, plasma membrane 40.77 48.41
PGSC0003DMT400083992 Potato golgi, plasma membrane 43.15 48.33
Bra026487.1-P Field mustard endoplasmic reticulum, plasma membrane 39.58 48.01
PGSC0003DMT400081211 Potato golgi, plasma membrane 42.26 47.97
PGSC0003DMT400082699 Potato extracellular, plasma membrane 18.45 47.69
CDX87161 Canola endoplasmic reticulum 39.29 47.65
CDY16863 Canola endoplasmic reticulum, plasma membrane 39.29 47.65
OQU79094 Sorghum plasma membrane 44.35 47.45
KRH10466 Soybean golgi, plasma membrane 35.12 47.39
Bra013854.1-P Field mustard golgi, plasma membrane 38.39 47.25
AT3G48740.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 40.48 47.06
Solyc06g072630.2.1 Tomato plasma membrane 40.48 47.06
AT5G23660.1 Thale cress plasma membrane 39.88 47.02
Bra019560.1-P Field mustard plasma membrane 39.88 47.02
CDX77928 Canola plasma membrane 39.88 47.02
Solyc03g097600.2.1 Tomato golgi, plasma membrane 41.37 46.96
CDY34333 Canola golgi, plasma membrane 38.1 46.89
VIT_17s0000g00820.t01 Wine grape plasma membrane 36.9 46.62
CDY03395 Canola endoplasmic reticulum, golgi, plasma membrane 37.8 46.52
CDX68492 Canola plasma membrane 39.58 46.5
CDX83046 Canola plasma membrane 39.58 46.5
VIT_01s0146g00260.t01 Wine grape golgi, plasma membrane 32.44 46.38
Bra012412.1-P Field mustard plasma membrane 24.11 46.29
PGSC0003DMT400011081 Potato plasma membrane 34.82 46.25
Bra029914.1-P Field mustard plasma membrane 39.88 46.21
OQU89754 Sorghum plastid 37.5 46.15
Solyc03g097620.1.1 Tomato plasma membrane 37.8 46.01
AT5G50800.1 Thale cress plasma membrane 40.18 45.92
AT4G25010.1 Thale cress plasma membrane 38.39 45.91
Bra019197.1-P Field mustard plasma membrane 32.44 45.8
CDY25828 Canola mitochondrion, plasma membrane 23.81 45.71
Bra018039.1-P Field mustard plasma membrane 39.29 45.67
CDY05867 Canola plasma membrane 39.29 45.67
CDY08093 Canola plasma membrane 39.29 45.67
Bra009700.1-P Field mustard plasma membrane 38.99 45.49
CDX88041 Canola plasma membrane 38.99 45.49
PGSC0003DMT400011076 Potato golgi, mitochondrion, plasma membrane, plastid 26.79 45.23
CDX84877 Canola golgi, plasma membrane 36.61 45.22
CDX80379 Canola plasma membrane 38.69 45.14
PGSC0003DMT400081206 Potato golgi, plasma membrane 39.29 45.05
Solyc03g097560.2.1 Tomato golgi, plasma membrane 39.29 44.75
Bra040489.1-P Field mustard golgi, plasma membrane 38.99 44.56
CDY05819 Canola golgi, plasma membrane 38.99 44.56
CDX71659 Canola golgi, plasma membrane 38.99 44.41
Solyc05g024260.2.1 Tomato plasma membrane 38.69 44.07
KRH43976 Soybean golgi, plasma membrane, plastid 36.61 43.93
CDX97233 Canola golgi, plasma membrane 38.69 43.62
KRH41096 Soybean golgi, plasma membrane 38.1 43.54
AT5G13170.1 Thale cress plasma membrane 37.8 43.49
Bra022761.1-P Field mustard golgi, plasma membrane 37.2 43.25
Solyc03g097570.2.1 Tomato cytosol, golgi, plasma membrane 38.99 43.09
CDY08964 Canola plastid 36.9 43.06
KRH54137 Soybean plasma membrane 39.58 43.04
CDX69663 Canola golgi, plasma membrane 38.1 42.95
AT5G50790.1 Thale cress plasma membrane 36.9 42.91
CDX91144 Canola plasma membrane 37.8 42.76
EER92278 Sorghum golgi, plasma membrane 39.58 42.49
CDX78511 Canola plasma membrane 36.9 42.47
Bra023394.1-P Field mustard plasma membrane 37.5 42.42
CDX85668 Canola endoplasmic reticulum, golgi, plasma membrane 37.5 42.42
CDY53626 Canola plasma membrane 36.61 42.27
KRH59783 Soybean golgi, plasma membrane 29.17 41.53
Solyc06g072640.1.1 Tomato plasma membrane 34.82 41.49
EES14183 Sorghum plastid 36.9 40.13
PGSC0003DMT400021966 Potato mitochondrion 23.51 39.5
EES19554 Sorghum golgi, plasma membrane 28.27 37.11
EES01039 Sorghum plasma membrane 26.79 36.89
KXG33819 Sorghum extracellular, golgi 29.46 36.8
OQU86800 Sorghum golgi, plasma membrane, vacuole 26.49 36.78
Bra008850.1-P Field mustard plasma membrane 22.32 35.89
Bra006185.1-P Field mustard golgi, plasma membrane, plastid 33.33 35.44
EES01331 Sorghum endoplasmic reticulum, plasma membrane, plastid 24.11 35.06
EES06723 Sorghum golgi, plasma membrane, plastid 25.3 34.0
KXG32677 Sorghum golgi, plasma membrane, vacuole 24.11 33.33
EES06744 Sorghum golgi, plasma membrane, plastid 24.7 33.2
EES20039 Sorghum golgi, plasma membrane, vacuole 23.21 32.64
OQU84855 Sorghum plasma membrane 23.21 29.77
EER94881 Sorghum golgi, plasma membrane 27.68 28.27
EES00047 Sorghum plasma membrane 21.73 28.19
KXG21564 Sorghum plasma membrane 19.35 26.42
Protein Annotations
Gene3D:1.20.1280.290MapMan:24.2.6.1EntrezGene:8056792UniProt:C5XSN7EnsemblPlants:EES06868ProteinID:EES06868
ProteinID:EES06868.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0008643GO:GO:0016020GO:GO:0016021GO:GO:0034219GO:GO:0051119PFAM:PF03083
PANTHER:PTHR10791PANTHER:PTHR10791:SF50EnsemblPlantsGene:SORBI_3004G157100InterPro:SWEET_sugar_transprunigene:Sbi.731TMHMM:TMhelix
UniParc:UPI0001A85B42RefSeq:XP_002453892.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr4:-:49817844..49821068
Molecular Weight (calculated)
35691.3 Da
IEP (calculated)
7.862
GRAVY (calculated)
0.714
Length
336 amino acids
Sequence
(BLAST)
001: MAFLNMEQQT WAFTFGILGN IISLMVFLSP LPTFYRVYRK KSTEGFQSTP YVVTLFSCML WIFYALLKSG AELLVTINGV GCVIETVYLG MYLLYAPKAA
101: RVLTAKMLLG LNVGVFGLVA LVTMVLSNGG LRVKVLGWIC VSVALSVFAA PLSIMRQVIR TKSVEFMPIS LSFFLVLSAV IWFAYGALKK DVFVAAPNVL
201: GFVFGLAQMA LYMAYRNKKP AAAAVIMVEE VKLPAEQYAS KEVAPPAAAH EGSRASCGAE VHPIDIDTLP VADVGRHHDS QAVVVIDVDV EPAATCAAAA
301: AAAGGVRGDG AAGVVTAGPE QPAAMKPVDM AIAVEA
Best Arabidopsis Sequence Match ( AT5G13170.1 )
(BLAST)
001: MGVMINHHFL AFIFGILGNV ISFLVFLAPV PTFYRIYKRK STESFQSLPY QVSLFSCMLW LYYALIKKDA FLLITINSFG CVVETLYIAM FFAYATREKR
101: ISAMKLFIAM NVAFFSLILM VTHFVVKTPP LQVSVLGWIC VAISVSVFAA PLMIVARVIK TKSVEYMPFT LSFFLTISAV MWFAYGLFLN DICIAIPNVV
201: GFVLGLLQMV LYLVYRNSNE KPEKINSSEQ QLKSIVVMSP LGVSEVHPVV TESVDPLSEA VHHEDLSKVT KVEEPSIENG KCYVEATRPE TV
Arabidopsis Description
SWEET15Bidirectional sugar transporter SWEET15 [Source:UniProtKB/Swiss-Prot;Acc:Q9FY94]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.