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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 6
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc03g097620.1.1 plasma membrane
Solyc06g074170.2.1
Solyc06g075780.1.1
Solyc11g068750.1.1
Solyc11g073060.1.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48740.1 Solyc03g097620.1.1 AT3G48740.1 24027245
AT3G48740.1 Solyc06g074170.2.1 AT5G22290.1 21798944
AT3G48740.1 Solyc11g068750.1.1 AT5G22290.1 21798944
AT5G23660.1 Solyc06g075780.1.1 AT3G46090.1 17259181
AT5G23660.1 Solyc11g073060.1.1 AT3G46090.1 17259181
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400011081 Potato plasma membrane 88.04 96.05
PGSC0003DMT400011076 Potato golgi, mitochondrion, plasma membrane, plastid 69.2 95.98
TraesCS6B01G421600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 42.39 61.26
GSMUA_Achr3P18700_001 Banana golgi, plasma membrane, plastid 53.26 52.31
Bra026487.1-P Field mustard endoplasmic reticulum, plasma membrane 51.81 51.62
CDX87161 Canola endoplasmic reticulum 51.45 51.26
CDY16863 Canola endoplasmic reticulum, plasma membrane 51.09 50.9
CDY24854 Canola golgi, plasma membrane 49.64 50.55
AT5G23660.1 Thale cress plasma membrane 52.17 50.53
Bra010477.1-P Field mustard golgi, plasma membrane 49.64 50.37
Zm00001d041067_P001 Maize plasma membrane 53.26 49.83
AT4G25010.1 Thale cress plasma membrane 50.72 49.82
Bra019560.1-P Field mustard plasma membrane 51.09 49.47
CDX77928 Canola plasma membrane 51.09 49.47
CDX83046 Canola plasma membrane 51.09 49.3
Zm00001d049252_P001 Maize plasma membrane 52.17 49.15
Bra018039.1-P Field mustard plasma membrane 51.45 49.13
CDY05867 Canola plasma membrane 51.45 49.13
CDY08093 Canola plasma membrane 51.45 49.13
KXG28442 Sorghum golgi, plasma membrane 51.45 49.13
TraesCS6D01G009700.1 Wheat plasma membrane 51.09 49.13
Bra009700.1-P Field mustard plasma membrane 51.09 48.96
CDX88041 Canola plasma membrane 51.09 48.96
CDX68492 Canola plasma membrane 50.72 48.95
TraesCS6A01G009100.1 Wheat plasma membrane 51.45 48.8
CDX92666 Canola golgi, plasma membrane 48.19 48.72
CDY03395 Canola endoplasmic reticulum, golgi, plasma membrane 48.19 48.72
CDY11047 Canola golgi, plasma membrane 48.19 48.72
CDY34333 Canola golgi, plasma membrane 48.19 48.72
CDX80379 Canola plasma membrane 50.72 48.61
Bra013854.1-P Field mustard golgi, plasma membrane 47.83 48.35
TraesCS1D01G052700.1 Wheat plasma membrane 51.45 47.97
Bra029914.1-P Field mustard plasma membrane 50.36 47.93
AT3G48740.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 50.0 47.75
Solyc06g072620.2.1 Tomato golgi, plasma membrane 49.64 47.74
TraesCS6A01G009000.1 Wheat plasma membrane 49.64 47.74
TraesCS6B01G015100.1 Wheat plasma membrane 50.72 47.62
TraesCS6D01G012100.1 Wheat plasma membrane 50.72 47.62
TraesCS1B01G066900.1 Wheat plasma membrane 50.0 47.59
TraesCS1A01G050400.1 Wheat plasma membrane 50.36 47.44
Zm00001d023677_P001 Maize plasma membrane 51.81 47.35
TraesCS6B01G015200.1 Wheat plasma membrane 50.36 47.28
Zm00001d023673_P001 Maize plasma membrane 51.45 47.18
Solyc03g097560.2.1 Tomato golgi, plasma membrane 50.36 47.12
EES17001 Sorghum golgi, plasma membrane 51.81 47.04
TraesCS6B01G015300.1 Wheat golgi, plasma membrane, vacuole 48.91 47.04
EES15957 Sorghum golgi, plasma membrane 51.45 47.02
GSMUA_Achr8P09230_001 Banana golgi, plasma membrane 47.83 46.98
HORVU6Hr1G000440.3 Barley golgi, plasma membrane 50.0 46.94
HORVU1Hr1G010210.2 Barley plasma membrane 49.64 46.92
TraesCSU01G206000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 50.72 46.82
Solyc03g097610.2.1 Tomato golgi, plasma membrane 47.83 46.81
TraesCS6D01G009600.1 Wheat plasma membrane 49.64 46.76
Os12t0476200-01 Rice extracellular, golgi 50.0 46.62
GSMUA_Achr6P23850_001 Banana golgi, plasma membrane 46.38 46.55
GSMUA_Achr6P07950_001 Banana golgi, plasma membrane 48.55 46.53
TraesCS6D01G367200.1 Wheat plasma membrane 48.55 46.53
TraesCS6D01G009500.1 Wheat endoplasmic reticulum, golgi, plasma membrane 50.36 46.49
HORVU6Hr1G089540.2 Barley golgi, plasma membrane 48.55 46.37
TraesCS6D01G367300.1 Wheat golgi, plasma membrane, vacuole 47.83 46.32
KRH41096 Soybean golgi, plasma membrane 49.28 46.26
TraesCS6A01G382600.1 Wheat plasma membrane 48.55 46.21
TraesCS6D01G367400.1 Wheat plasma membrane 48.55 46.21
TraesCS6A01G382400.1 Wheat plasma membrane 49.28 46.1
AT5G50800.1 Thale cress plasma membrane 48.91 45.92
Os11t0508600-01 Rice golgi, plasma membrane 50.36 45.87
TraesCS6B01G421800.1 Wheat plasma membrane 48.19 45.86
TraesCS6B01G421700.1 Wheat plasma membrane 46.74 45.26
Bra040489.1-P Field mustard golgi, plasma membrane 48.19 45.24
CDY05819 Canola golgi, plasma membrane 48.19 45.24
TraesCS6B01G421500.1 Wheat plasma membrane 48.19 45.24
CDY08964 Canola plastid 47.1 45.14
CDX71659 Canola golgi, plasma membrane 48.19 45.08
GSMUA_AchrUn_... Banana golgi, plasma membrane 46.01 45.04
KRH54137 Soybean plasma membrane 50.36 44.98
Bra019197.1-P Field mustard plasma membrane 38.77 44.96
Solyc03g097600.2.1 Tomato golgi, plasma membrane 48.19 44.93
OQU79094 Sorghum plasma membrane 51.09 44.9
Solyc06g072630.2.1 Tomato plasma membrane 46.74 44.64
KRH59783 Soybean golgi, plasma membrane 38.04 44.49
Solyc09g074530.2.1 Tomato golgi, plasma membrane 45.65 44.06
Solyc03g097590.2.1 Tomato golgi, plasma membrane 47.46 43.96
OQU89754 Sorghum plastid 43.48 43.96
Solyc03g097580.2.1 Tomato golgi, plasma membrane 47.83 43.71
VIT_17s0000g00820.t01 Wine grape plasma membrane 42.03 43.61
Solyc03g097870.2.1 Tomato golgi, plasma membrane 47.1 43.33
Zm00001d021064_P001 Maize plasma membrane 44.93 42.91
Solyc05g024260.2.1 Tomato plasma membrane 45.65 42.71
Os02t0513100-01 Rice golgi, plasma membrane, plastid 48.91 42.32
TraesCS5B01G288600.1 Wheat plasma membrane 43.84 42.16
Solyc03g097570.2.1 Tomato cytosol, golgi, plasma membrane 46.38 42.11
TraesCS5A01G289200.1 Wheat plasma membrane 43.48 41.81
TraesCS5D01G297100.1 Wheat plasma membrane 43.48 41.81
Os09t0508250-00 Rice extracellular, golgi 26.45 41.71
Solyc01g099870.1.1 Tomato plasma membrane, vacuole 27.54 40.86
TraesCS7B01G050500.1 Wheat plasma membrane 44.93 40.26
Zm00001d050577_P001 Maize plasma membrane 43.84 39.8
TraesCS7A01G147300.1 Wheat plasma membrane 44.57 39.68
TraesCS7D01G149000.1 Wheat plasma membrane 44.57 39.68
HORVU7Hr1G030160.1 Barley plasma membrane 44.93 39.62
GSMUA_Achr10P... Banana plasma membrane 47.83 39.52
GSMUA_Achr8P00620_001 Banana plasma membrane, vacuole 50.0 39.32
Zm00001d007365_P001 Maize endoplasmic reticulum 48.91 39.24
GSMUA_AchrUn_... Banana plasma membrane 35.51 38.74
Solyc06g072640.1.1 Tomato plasma membrane 39.49 38.65
GSMUA_Achr11P... Banana plasma membrane, vacuole 46.38 38.44
EES06868 Sorghum golgi, plasma membrane, plastid 46.01 37.8
Os08t0535200-01 Rice golgi, plasma membrane, plastid 42.03 37.78
HORVU6Hr1G089600.1 Barley golgi, mitochondrion, peroxisome 48.19 37.78
HORVU5Hr1G076770.1 Barley golgi, plasma membrane 43.84 37.69
TraesCS7A01G261100.1 Wheat plasma membrane 40.22 36.63
TraesCS6A01G382500.1 Wheat plasma membrane 40.58 36.48
TraesCS7B01G160000.1 Wheat plasma membrane 40.22 36.27
TraesCS7D01G263100.1 Wheat plasma membrane 40.22 36.27
EES14183 Sorghum plastid 40.58 36.25
Solyc04g064610.2.1 Tomato plasma membrane 32.25 36.18
Zm00001d031647_P001 Maize plasma membrane 40.58 36.13
HORVU7Hr1G054710.1 Barley plasma membrane 39.13 35.64
Zm00001d016590_P001 Maize plasma membrane 41.67 35.49
Solyc04g064620.2.1 Tomato extracellular, golgi, plasma membrane 30.8 34.69
Solyc04g064640.2.1 Tomato endoplasmic reticulum, golgi 30.07 34.02
Solyc04g064630.2.1 Tomato golgi, plasma membrane 30.43 33.6
Solyc07g062120.2.1 Tomato plasma membrane, plastid 27.54 32.34
Solyc06g060590.2.1 Tomato plasma membrane 29.71 32.03
Solyc06g071400.2.1 Tomato cytosol, golgi, plasma membrane 27.54 31.93
Solyc02g086920.1.1 Tomato golgi, plasma membrane 26.81 31.76
Solyc12g055870.1.1 Tomato golgi, plasma membrane 27.54 31.67
Solyc03g005880.2.1 Tomato plasma membrane 27.17 31.65
Solyc02g071520.2.1 Tomato plasma membrane 26.81 31.49
Solyc03g114200.2.1 Tomato golgi, plasma membrane, plastid 26.45 30.93
Solyc06g060580.1.1 Tomato golgi, plasma membrane 27.54 30.28
Solyc08g082770.2.1 Tomato golgi, plasma membrane 26.81 29.48
Solyc03g007360.2.1 Tomato golgi, plasma membrane 26.81 28.79
Solyc11g028270.1.1 Tomato extracellular 17.75 27.37
Solyc01g099880.2.1 Tomato endoplasmic reticulum, golgi, plasma membrane 28.99 27.3
Protein Annotations
Gene3D:1.20.1280.290MapMan:24.2.6.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0008643GO:GO:0016020GO:GO:0016021
GO:GO:0034219GO:GO:0051119UniProt:K4BJH9PFAM:PF03083PANTHER:PTHR10791PANTHER:PTHR10791:SF34
InterPro:SWEET_sugar_transprEnsemblPlantsGene:Solyc03g097620.1EnsemblPlants:Solyc03g097620.1.1TMHMM:TMhelixUniParc:UPI0002768395SEG:seg
Description
Bidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:K4BJH9]
Coordinates
chr3:-:59952039..59954012
Molecular Weight (calculated)
30745.3 Da
IEP (calculated)
9.501
GRAVY (calculated)
0.545
Length
276 amino acids
Sequence
(BLAST)
001: MTSVSHTHPL VYTFGILGNL VSFMVFIAPV PTFYRIVKKK SSEGFHSLPY VVGLFSAMLW IYYAMVKTNV TLLITINSFG CIAETIYVAI YFTYATKKAR
101: MKTLGLVLLL NFGVFGLILF LTQILCQGTK RAEVIGWICM AFSISVFVAP LSIMGRVIRT KSVEFMPFNL SLALTVSAVM WFLYGLLLKD VYVAVPNIPG
201: MILGVLQMIL YGIYRNSKSN NVATEKELPI VVKVDQEQPT KVNSEVYPVN ISSLDSENGE AKDGKNLQDP QMNSQV
Best Arabidopsis Sequence Match ( AT5G23660.1 )
(BLAST)
001: MALFDTHNTW AFVFGLLGNL ISFAVFLSPV PTFYRICKKK TTEGFQSIPY VVALFSAMLW LYYATQKKDV FLLVTINSFG CFIETIYISI FVAFASKKAR
101: MLTVKLLLLM NFGGFCLILL LCQFLAKGTT RAKIIGGICV GFSVCVFAAP LSIIRTVIKT KSVEYMPFSL SLTLTISAVI WLLYGLALKD IYVAFPNVIG
201: FVLGALQMIL YVVYKYCKTP SDLVEKELEA AKLPEVSIDM VKLGTLTSPE PVAITVVRSV NTCNCNDRNA EIENGQGVRN SAATT
Arabidopsis Description
SWEET12Bidirectional sugar transporter SWEET12 [Source:UniProtKB/Swiss-Prot;Acc:O82587]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.