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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 6
  • vacuole 4
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d007365_P001 plasma membrane
Zm00001d016590_P001 plasma membrane
Zm00001d021064_P001 plasma membrane
Zm00001d023673_P001 plasma membrane
Zm00001d023677_P001 plasma membrane
Zm00001d031647_P001 plasma membrane
Zm00001d041067_P001 plasma membrane
Zm00001d049252_P001 plasma membrane
Zm00001d050577_P001 plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48740.1 Zm00001d007365_P001 AT3G48740.1 24027245
AT3G48740.1 Zm00001d016590_P001 AT3G48740.1 24027245
AT3G48740.1 Zm00001d021064_P001 AT3G48740.1 24027245
AT3G48740.1 Zm00001d023673_P001 AT3G48740.1 24027245
AT3G48740.1 Zm00001d023677_P001 AT3G48740.1 24027245
AT3G48740.1 Zm00001d031647_P001 AT3G48740.1 24027245
AT3G48740.1 Zm00001d041067_P001 AT3G48740.1 24027245
AT3G48740.1 Zm00001d049252_P001 AT3G48740.1 24027245
AT3G48740.1 Zm00001d050577_P001 AT3G48740.1 24027245
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG28442 Sorghum golgi, plasma membrane 69.48 82.7
Zm00001d049252_P001 Maize plasma membrane 68.31 80.2
HORVU6Hr1G000440.3 Barley golgi, plasma membrane 63.08 73.81
TraesCS1B01G066900.1 Wheat plasma membrane 62.21 73.79
TraesCS6D01G009600.1 Wheat plasma membrane 62.79 73.72
HORVU1Hr1G010210.2 Barley plasma membrane 62.21 73.29
TraesCS6A01G009000.1 Wheat plasma membrane 61.05 73.17
TraesCS1A01G050400.1 Wheat plasma membrane 62.21 73.04
TraesCS6A01G009100.1 Wheat plasma membrane 61.63 72.85
TraesCS6D01G012100.1 Wheat plasma membrane 62.21 72.79
TraesCS6B01G015300.1 Wheat golgi, plasma membrane, vacuole 60.17 72.13
TraesCS6D01G009700.1 Wheat plasma membrane 60.17 72.13
TraesCS6B01G015100.1 Wheat plasma membrane 61.63 72.11
TraesCS6B01G015200.1 Wheat plasma membrane 61.63 72.11
TraesCS1D01G052700.1 Wheat plasma membrane 61.92 71.96
TraesCSU01G206000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 61.63 70.9
Os11t0508600-01 Rice golgi, plasma membrane 62.21 70.63
TraesCS6D01G009500.1 Wheat endoplasmic reticulum, golgi, plasma membrane 60.76 69.9
Zm00001d023673_P001 Maize plasma membrane 56.69 64.78
Zm00001d023677_P001 Maize plasma membrane 56.69 64.57
Zm00001d041067_P001 Maize plasma membrane 54.94 64.07
KRH63814 Soybean extracellular 17.73 62.89
GSMUA_Achr3P18700_001 Banana golgi, plasma membrane, plastid 50.58 61.92
GSMUA_Achr6P23850_001 Banana golgi, plasma membrane 47.09 58.91
CDY69440 Canola plasma membrane 36.63 58.88
GSMUA_Achr6P07950_001 Banana golgi, plasma membrane 48.55 57.99
KRH63811 Soybean plasma membrane 41.57 55.43
KRH54140 Soybean plasma membrane 41.86 55.38
KRH59785 Soybean endoplasmic reticulum, plasma membrane 40.41 54.09
VIT_17s0000g00830.t01 Wine grape plasma membrane 42.44 54.07
KRH54141 Soybean plasma membrane 40.41 53.88
KRH41097 Soybean golgi, plasma membrane 38.95 52.76
KRH63812 Soybean endoplasmic reticulum, golgi, plasma membrane 42.44 51.77
GSMUA_Achr10P... Banana plasma membrane 49.71 51.2
KRH01827 Soybean golgi, plasma membrane 39.24 50.37
KRH42232 Soybean endoplasmic reticulum, plasma membrane 40.12 50.37
AT5G50800.1 Thale cress plasma membrane 42.73 50.0
PGSC0003DMT400082699 Potato extracellular, plasma membrane 18.9 50.0
Bra026487.1-P Field mustard endoplasmic reticulum, plasma membrane 40.12 49.82
KRH46857 Soybean golgi, plasma membrane 39.53 49.82
CDY24854 Canola golgi, plasma membrane 39.24 49.82
Bra010477.1-P Field mustard golgi, plasma membrane 39.24 49.63
KRH01828 Soybean plasma membrane 38.95 49.45
PGSC0003DMT400011081 Potato plasma membrane 36.34 49.41
CDX87161 Canola endoplasmic reticulum 39.53 49.1
CDX92666 Canola golgi, plasma membrane 38.95 49.08
CDY11047 Canola golgi, plasma membrane 38.95 49.08
Solyc03g097620.1.1 Tomato plasma membrane 39.24 48.91
KRH46856 Soybean plasma membrane 38.66 48.9
CDY16863 Canola endoplasmic reticulum, plasma membrane 39.24 48.74
CDY03395 Canola endoplasmic reticulum, golgi, plasma membrane 38.66 48.72
CDY34333 Canola golgi, plasma membrane 38.66 48.72
Zm00001d050577_P001 Maize plasma membrane 43.02 48.68
CDX84877 Canola golgi, plasma membrane 38.37 48.53
Bra013854.1-P Field mustard golgi, plasma membrane 38.37 48.35
Solyc06g072620.2.1 Tomato golgi, plasma membrane 40.12 48.08
Bra019560.1-P Field mustard plasma membrane 39.83 48.07
CDX77928 Canola plasma membrane 39.83 48.07
KRH58347 Soybean golgi, plasma membrane 39.53 48.06
AT4G25010.1 Thale cress plasma membrane 39.24 48.04
Zm00001d047487_P001 Maize plasma membrane 39.24 47.87
Zm00001d021064_P001 Maize plasma membrane 40.12 47.75
Bra040489.1-P Field mustard golgi, plasma membrane 40.7 47.62
CDY05819 Canola golgi, plasma membrane 40.7 47.62
CDX68492 Canola plasma membrane 39.53 47.55
CDX83046 Canola plasma membrane 39.53 47.55
Solyc03g097610.2.1 Tomato golgi, plasma membrane 38.95 47.52
Bra009700.1-P Field mustard plasma membrane 39.53 47.22
CDX88041 Canola plasma membrane 39.53 47.22
PGSC0003DMT400081206 Potato golgi, plasma membrane 40.12 47.1
Bra018039.1-P Field mustard plasma membrane 39.53 47.06
CDY05867 Canola plasma membrane 39.53 47.06
CDY08093 Canola plasma membrane 39.53 47.06
Bra029914.1-P Field mustard plasma membrane 39.53 46.9
CDX80379 Canola plasma membrane 39.24 46.88
PGSC0003DMT400081212 Potato golgi, plasma membrane 38.95 46.85
AT5G23660.1 Thale cress plasma membrane 38.66 46.67
CDX71659 Canola golgi, plasma membrane 39.83 46.44
Solyc03g097560.2.1 Tomato golgi, plasma membrane 39.83 46.44
PGSC0003DMT400011076 Potato golgi, mitochondrion, plasma membrane, plastid 26.74 46.23
Bra019197.1-P Field mustard plasma membrane 31.98 46.22
KRH10466 Soybean golgi, plasma membrane 33.43 46.18
AT3G48740.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 38.66 46.02
Bra022761.1-P Field mustard golgi, plasma membrane 38.66 46.02
VIT_17s0000g00820.t01 Wine grape plasma membrane 35.47 45.86
PGSC0003DMT400083992 Potato golgi, plasma membrane 39.53 45.33
Solyc06g072630.2.1 Tomato plasma membrane 38.08 45.33
PGSC0003DMT400081210 Potato golgi, plasma membrane 38.95 45.27
Bra012412.1-P Field mustard plasma membrane 22.97 45.14
VIT_01s0146g00260.t01 Wine grape golgi, plasma membrane 30.81 45.11
Solyc05g024260.2.1 Tomato plasma membrane 38.66 45.08
Solyc03g097870.2.1 Tomato golgi, plasma membrane 39.24 45.0
Solyc03g097590.2.1 Tomato golgi, plasma membrane 38.95 44.97
AT5G50790.1 Thale cress plasma membrane 37.5 44.64
CDY25828 Canola mitochondrion, plasma membrane 22.67 44.57
Solyc03g097580.2.1 Tomato golgi, plasma membrane 38.95 44.37
Zm00001d016590_P001 Maize plasma membrane 41.57 44.14
AT5G13170.1 Thale cress plasma membrane 36.92 43.49
Zm00001d029135_P001 Maize golgi, plasma membrane 37.79 43.48
CDY08964 Canola plastid 36.34 43.4
KRH54137 Soybean plasma membrane 38.66 43.04
Bra023394.1-P Field mustard plasma membrane 36.92 42.76
CDX85668 Canola endoplasmic reticulum, golgi, plasma membrane 36.92 42.76
CDX91144 Canola plasma membrane 36.92 42.76
CDX69663 Canola golgi, plasma membrane 36.92 42.62
CDX78511 Canola plasma membrane 36.05 42.47
CDX97233 Canola golgi, plasma membrane 36.63 42.28
PGSC0003DMT400081211 Potato golgi, plasma membrane 36.34 42.23
Solyc03g097600.2.1 Tomato golgi, plasma membrane 36.34 42.23
CDY53626 Canola plasma membrane 35.47 41.92
KRH43976 Soybean golgi, plasma membrane, plastid 33.43 41.07
Zm00001d031647_P001 Maize plasma membrane 36.92 40.97
KRH41096 Soybean golgi, plasma membrane 34.88 40.82
Solyc03g097570.2.1 Tomato cytosol, golgi, plasma membrane 36.05 40.79
Solyc06g072640.1.1 Tomato plasma membrane 32.85 40.07
KRH59783 Soybean golgi, plasma membrane 26.16 38.14
PGSC0003DMT400021966 Potato mitochondrion 21.8 37.5
Bra006185.1-P Field mustard golgi, plasma membrane, plastid 33.14 36.08
Zm00001d038226_P001 Maize golgi, plasma membrane, vacuole 25.0 34.4
Bra008850.1-P Field mustard plasma membrane 20.64 33.97
Zm00001d000222_P001 Maize plasma membrane 26.16 33.71
Zm00001d009071_P002 Maize plasma membrane 23.26 33.47
Zm00001d043735_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 22.09 33.04
Zm00001d040656_P002 Maize golgi, plasma membrane, vacuole 21.51 32.6
Zm00001d044421_P001 Maize plasma membrane 22.97 32.38
Zm00001d011299_P001 Maize plasma membrane 22.09 31.28
Zm00001d015914_P005 Maize plasma membrane 22.38 30.2
Zm00001d015905_P001 Maize plasma membrane 22.09 30.16
Zm00001d029098_P001 Maize golgi, plasma membrane, plastid, vacuole 25.29 27.44
Zm00001d010440_P001 Maize extracellular, golgi, plasma membrane 18.9 27.31
Zm00001d015912_P001 Maize plasma membrane 20.64 27.2
Zm00001d039347_P001 Maize endoplasmic reticulum, golgi, mitochondrion, plasma membrane 19.19 24.91
Protein Annotations
EMBL:BT036843EnsemblPlants:Zm00001d007365_P001EnsemblPlants:Zm00001d007365_T001EnsemblPlantsGene:Zm00001d007365EntrezGene:100194326Gene3D:1.20.1280.290
GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0008643GO:GO:0016020GO:GO:0016021
InterPro:SWEET_sugar_transprPANTHER:PTHR10791PANTHER:PTHR10791:SF56PFAM:PF03083ProteinID:ONM26601.1SEG:seg
TMHMM:TMhelixUniParc:UPI00017B712EUniProt:B4FIA5MapMan:24.2.6.1::
Description
sugars will eventually be exported transporter14a sugars will eventually be exported transporter14a
Coordinates
chr2:+:229754222..229756856
Molecular Weight (calculated)
37269.4 Da
IEP (calculated)
9.735
GRAVY (calculated)
0.596
Length
344 amino acids
Sequence
(BLAST)
001: MAGLSLQHPM AFAFGLLGNI ISFMTYLAPL PTFCRIYRNK STEGFQSVPY VVALFSAMLW IYYALLKSNE FLLITINSAG CVIETLYIAT YLLYAPNKAK
101: LFTAKILLLL NVGVFGLILL LTLLLSAGPH RVVVLGWVCV AFSVSVFVAP LSIIRQVVRT RSVEFMPFSL SFSLTASAVV WFLYGLLIKD KYVALPNVLG
201: FTFGVVQMGM YALYRNATPR VPAAKEAAAA ADDGNTFNFK APGEHVVTIA KLTAAAPATA AELIIKARDD AQHPPEEEAA AAKAAPAKSK LLIPLPEHAY
301: ACMCIIRSGS HHKLGRACLL GTSTRPPACL PARMIQSSCY IRKG
Best Arabidopsis Sequence Match ( AT5G23660.1 )
(BLAST)
001: MALFDTHNTW AFVFGLLGNL ISFAVFLSPV PTFYRICKKK TTEGFQSIPY VVALFSAMLW LYYATQKKDV FLLVTINSFG CFIETIYISI FVAFASKKAR
101: MLTVKLLLLM NFGGFCLILL LCQFLAKGTT RAKIIGGICV GFSVCVFAAP LSIIRTVIKT KSVEYMPFSL SLTLTISAVI WLLYGLALKD IYVAFPNVIG
201: FVLGALQMIL YVVYKYCKTP SDLVEKELEA AKLPEVSIDM VKLGTLTSPE PVAITVVRSV NTCNCNDRNA EIENGQGVRN SAATT
Arabidopsis Description
SWEET12Bidirectional sugar transporter SWEET12 [Source:UniProtKB/Swiss-Prot;Acc:O82587]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.