Factsheet for TraesCS6D01G012100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
golgi 5
plasma membrane 6
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G050400.1	plasma membrane
TraesCS1B01G066900.1	plasma membrane
TraesCS1D01G052700.1	plasma membrane
TraesCS5A01G289200.1	plasma membrane
TraesCS5B01G288600.1	plasma membrane
TraesCS5D01G297100.1	plasma membrane
TraesCS6A01G009000.1	plasma membrane
TraesCS6A01G009100.1	plasma membrane
TraesCS6A01G382400.1	plasma membrane
TraesCS6A01G382500.1	plasma membrane
TraesCS6A01G382600.1	plasma membrane
TraesCS6B01G015100.1	plasma membrane
TraesCS6B01G015200.1	plasma membrane
TraesCS6B01G015300.1	plasma membrane
TraesCS6B01G421500.1	plasma membrane
TraesCS6B01G421600.1	plasma membrane
TraesCS6B01G421700.1	plasma membrane
TraesCS6B01G421800.1	plasma membrane
TraesCS6D01G009500.1	plasma membrane
TraesCS6D01G009600.1	plasma membrane
TraesCS6D01G009700.1	plasma membrane
TraesCS6D01G012100.1	plasma membrane
TraesCS6D01G367200.1	plasma membrane
TraesCS6D01G367300.1	plasma membrane
TraesCS6D01G367400.1	plasma membrane
TraesCS7A01G147300.1	plasma membrane
TraesCS7A01G261100.1	plasma membrane
TraesCS7B01G050500.1	plasma membrane
TraesCS7B01G160000.1	plasma membrane
TraesCS7D01G149000.1	plasma membrane
TraesCS7D01G263100.1	plasma membrane
TraesCSU01G206000.1	plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48740.1	TraesCS1A01G050400.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS1B01G066900.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS1D01G052700.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS5A01G289200.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS5B01G288600.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS5D01G297100.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS6A01G009000.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS6A01G009100.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS6A01G382400.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS6A01G382500.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS6A01G382600.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS6B01G015100.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS6B01G015200.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS6B01G015300.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS6B01G421500.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS6B01G421600.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS6B01G421700.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS6B01G421800.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS6D01G009500.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS6D01G009600.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS6D01G009700.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS6D01G012100.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS6D01G367200.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS6D01G367300.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS6D01G367400.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS7A01G147300.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS7A01G261100.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS7B01G050500.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS7B01G160000.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS7D01G149000.1	AT3G48740.1	24027245
AT3G48740.1	TraesCS7D01G263100.1	AT3G48740.1	24027245
AT3G48740.1	TraesCSU01G206000.1	AT3G48740.1	24027245

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G009100.1	Wheat	plasma membrane	92.52	93.47
TraesCS6B01G015100.1	Wheat	plasma membrane	92.18	92.18
HORVU6Hr1G000440.3	Barley	golgi, plasma membrane	90.48	90.48
TraesCS6D01G009600.1	Wheat	plasma membrane	84.69	84.98
TraesCS6D01G009500.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	85.71	84.28
TraesCS6D01G009700.1	Wheat	plasma membrane	81.63	83.62
TraesCS1D01G052700.1	Wheat	plasma membrane	82.31	81.76
KXG28442	Sorghum	golgi, plasma membrane	73.47	74.74
Zm00001d049252_P001	Maize	plasma membrane	72.45	72.7
Os11t0508600-01	Rice	golgi, plasma membrane	72.45	70.3
KRH63814	Soybean	extracellular	20.75	62.89
Zm00001d007365_P001	Maize	endoplasmic reticulum	72.79	62.21
GSMUA_Achr6P23850_001	Banana	golgi, plasma membrane	57.14	61.09
TraesCS6D01G367300.1	Wheat	golgi, plasma membrane, vacuole	58.5	60.35
GSMUA_Achr3P18700_001	Banana	golgi, plasma membrane, plastid	57.48	60.14
TraesCS6D01G367200.1	Wheat	plasma membrane	58.84	60.07
TraesCS6D01G367400.1	Wheat	plasma membrane	58.16	58.97
GSMUA_Achr6P07950_001	Banana	golgi, plasma membrane	57.14	58.33
KRH63811	Soybean	plasma membrane	50.0	56.98
KRH54140	Soybean	plasma membrane	49.66	56.15
CDY69440	Canola	plasma membrane	40.82	56.07
KRH59785	Soybean	endoplasmic reticulum, plasma membrane	48.98	56.03
KRH41097	Soybean	golgi, plasma membrane	47.96	55.51
KRH54141	Soybean	plasma membrane	48.3	55.04
VIT_17s0000g00830.t01	Wine grape	plasma membrane	50.0	54.44
Bra026487.1-P	Field mustard	endoplasmic reticulum, plasma membrane	49.32	52.35
KRH01827	Soybean	golgi, plasma membrane	47.62	52.24
KRH63812	Soybean	endoplasmic reticulum, golgi, plasma membrane	50.0	52.13
KRH46857	Soybean	golgi, plasma membrane	47.96	51.65
CDX87161	Canola	endoplasmic reticulum	48.64	51.62
CDY24854	Canola	golgi, plasma membrane	47.28	51.29
CDY16863	Canola	endoplasmic reticulum, plasma membrane	48.3	51.26
Bra010477.1-P	Field mustard	golgi, plasma membrane	47.28	51.1
KRH42232	Soybean	endoplasmic reticulum, plasma membrane	47.62	51.09
PGSC0003DMT400011081	Potato	plasma membrane	43.88	50.99
GSMUA_Achr10P...	Banana	plasma membrane	57.82	50.9
Bra019560.1-P	Field mustard	plasma membrane	49.32	50.88
CDX77928	Canola	plasma membrane	49.32	50.88
Solyc03g097620.1.1	Tomato	plasma membrane	47.62	50.72
KRH58347	Soybean	golgi, plasma membrane	48.64	50.53
CDX68492	Canola	plasma membrane	48.98	50.35
CDX83046	Canola	plasma membrane	48.98	50.35
KRH01828	Soybean	plasma membrane	46.26	50.18
KRH46856	Soybean	plasma membrane	46.26	50.0
PGSC0003DMT400082699	Potato	extracellular, plasma membrane	22.11	50.0
Bra013854.1-P	Field mustard	golgi, plasma membrane	46.26	49.82
CDX92666	Canola	golgi, plasma membrane	46.26	49.82
CDY03395	Canola	endoplasmic reticulum, golgi, plasma membrane	46.26	49.82
CDY11047	Canola	golgi, plasma membrane	46.26	49.82
CDY34333	Canola	golgi, plasma membrane	46.26	49.82
Bra018039.1-P	Field mustard	plasma membrane	48.64	49.48
CDY05867	Canola	plasma membrane	48.64	49.48
CDY08093	Canola	plasma membrane	48.64	49.48
AT5G23660.1	Thale cress	plasma membrane	47.96	49.47
Bra029914.1-P	Field mustard	plasma membrane	48.64	49.31
Bra009700.1-P	Field mustard	plasma membrane	48.3	49.31
CDX88041	Canola	plasma membrane	48.3	49.31
PGSC0003DMT400011076	Potato	golgi, mitochondrion, plasma membrane, plastid	33.33	49.25
AT4G25010.1	Thale cress	plasma membrane	46.94	49.11
CDX80379	Canola	plasma membrane	47.96	48.96
AT5G50800.1	Thale cress	plasma membrane	48.64	48.64
AT3G48740.1	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	47.62	48.44
Bra019197.1-P	Field mustard	plasma membrane	38.78	47.9
Solyc06g072620.2.1	Tomato	golgi, plasma membrane	46.26	47.39
VIT_01s0146g00260.t01	Wine grape	golgi, plasma membrane	37.76	47.23
Solyc03g097610.2.1	Tomato	golgi, plasma membrane	44.9	46.81
CDX84877	Canola	golgi, plasma membrane	43.2	46.69
VIT_17s0000g00820.t01	Wine grape	plasma membrane	42.18	46.62
PGSC0003DMT400081206	Potato	golgi, plasma membrane	46.26	46.42
PGSC0003DMT400081210	Potato	golgi, plasma membrane	46.6	46.28
Bra040489.1-P	Field mustard	golgi, plasma membrane	46.26	46.26
CDY05819	Canola	golgi, plasma membrane	46.26	46.26
TraesCS7D01G149000.1	Wheat	plasma membrane	48.64	46.13
PGSC0003DMT400081212	Potato	golgi, plasma membrane	44.56	45.8
CDX71659	Canola	golgi, plasma membrane	45.92	45.76
Solyc03g097560.2.1	Tomato	golgi, plasma membrane	45.92	45.76
Solyc03g097580.2.1	Tomato	golgi, plasma membrane	46.6	45.36
PGSC0003DMT400083992	Potato	golgi, plasma membrane	46.26	45.33
Solyc03g097870.2.1	Tomato	golgi, plasma membrane	46.26	45.33
Bra012412.1-P	Field mustard	plasma membrane	26.87	45.14
Solyc03g097590.2.1	Tomato	golgi, plasma membrane	45.58	44.97
TraesCS5D01G297100.1	Wheat	plasma membrane	43.88	44.95
CDY08964	Canola	plastid	43.88	44.79
Solyc06g072630.2.1	Tomato	plasma membrane	43.88	44.64
CDY25828	Canola	mitochondrion, plasma membrane	26.53	44.57
Bra022761.1-P	Field mustard	golgi, plasma membrane	43.54	44.29
KRH10466	Soybean	golgi, plasma membrane	37.41	44.18
KRH54137	Soybean	plasma membrane	46.26	44.01
Solyc03g097600.2.1	Tomato	golgi, plasma membrane	44.22	43.92
Solyc05g024260.2.1	Tomato	plasma membrane	43.88	43.73
PGSC0003DMT400081211	Potato	golgi, plasma membrane	43.88	43.58
Bra023394.1-P	Field mustard	plasma membrane	43.54	43.1
CDX85668	Canola	endoplasmic reticulum, golgi, plasma membrane	43.54	43.1
CDX91144	Canola	plasma membrane	43.54	43.1
CDX69663	Canola	golgi, plasma membrane	43.54	42.95
CDX97233	Canola	golgi, plasma membrane	43.54	42.95
AT5G50790.1	Thale cress	plasma membrane	42.18	42.91
TraesCS4D01G183800.1	Wheat	plasma membrane	45.24	42.77
AT5G13170.1	Thale cress	plasma membrane	42.18	42.47
CDY53626	Canola	plasma membrane	41.84	42.27
KRH41096	Soybean	golgi, plasma membrane	42.18	42.18
CDX78511	Canola	plasma membrane	41.84	42.12
Solyc03g097570.2.1	Tomato	cytosol, golgi, plasma membrane	42.52	41.12
KRH43976	Soybean	golgi, plasma membrane, plastid	38.78	40.71
Solyc06g072640.1.1	Tomato	plasma membrane	38.78	40.43
KRH59783	Soybean	golgi, plasma membrane	31.97	39.83
TraesCS7D01G263100.1	Wheat	plasma membrane	39.8	38.24
Bra006185.1-P	Field mustard	golgi, plasma membrane, plastid	38.44	35.76
PGSC0003DMT400021966	Potato	mitochondrion	24.15	35.5
TraesCS5D01G046300.1	Wheat	plasma membrane	28.57	34.29
TraesCS3D01G403300.1	Wheat	plasma membrane	31.29	34.2
Bra008850.1-P	Field mustard	plasma membrane	24.15	33.97
TraesCS1D01G265400.1	Wheat	golgi, plasma membrane, vacuole	29.93	33.72
TraesCS2D01G042500.1	Wheat	plasma membrane	27.89	33.33
TraesCS2D01G042600.1	Wheat	plasma membrane	27.89	33.33
TraesCS1D01G365200.1	Wheat	plasma membrane	27.89	33.2
TraesCS2D01G042400.1	Wheat	plasma membrane	26.19	33.05
TraesCS7D01G160600.1	Wheat	plasma membrane	27.21	32.52
TraesCS7D01G521400.1	Wheat	plasma membrane	26.87	32.51
TraesCS6D01G138000.1	Wheat	plasma membrane	26.19	32.22
TraesCS2D01G052100.1	Wheat	plasma membrane	21.09	31.79
TraesCS3D01G256100.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	24.83	31.6
TraesCS5D01G046400.1	Wheat	plasma membrane	28.23	30.86
TraesCS6D01G201900.1	Wheat	plasma membrane	24.83	28.63
TraesCS3D01G227000.1	Wheat	plasma membrane	18.71	27.09
TraesCS1D01G125900.2	Wheat	plasma membrane	22.45	26.83
TraesCS4D01G169200.1	Wheat	golgi, plasma membrane, plastid, vacuole	25.85	25.42
TraesCS7D01G490600.1	Wheat	plasma membrane	13.95	25.31

Protein Annotations

EnsemblPlants:TraesCS6D01G012100.1	EnsemblPlantsGene:TraesCS6D01G012100	Gene3D:1.20.1280.290	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:SWEET_sugar_transpr	PANTHER:PTHR10791	PANTHER:PTHR10791:SF56	PFAM:PF03083	SEG:seg	TMHMM:TMhelix
MapMan:24.2.6.1	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:4720478..4722722

Molecular Weight (calculated)

32365.5 Da

IEP (calculated)

8.555

GRAVY (calculated)

0.650

Length

294 amino acids

Sequence
(BLAST)

001: MGGLSLQHPW AFAFGLLGNV ISFMTYLAPL PTFYRIYRSK STQGFQSVPY VVALFSAMLW IYYALLKSDE CLLITINSAG CVIETIYIII YLTYAPKQAK
101: LFTAKILLLL NVGVFGLILL LTLLLSEGEK RVVMLGWVCV GFSVSVFIAP LSVIRLVVRT RSVEFMPFSL SLSLTVSAVV WFLYGLLIKD KYVALPNILG
201: FAFGVIQMGL YALYRNAMPS PAPKQVDDAD AIKVPEHVIH IAKLGPAAAI ELNTHNPMER GMPPPMEDNG LACASDMTKG GIDMVEKATR VEQV

Best Arabidopsis Sequence Match ( AT5G23660.1 )
(BLAST)

001: MALFDTHNTW AFVFGLLGNL ISFAVFLSPV PTFYRICKKK TTEGFQSIPY VVALFSAMLW LYYATQKKDV FLLVTINSFG CFIETIYISI FVAFASKKAR
101: MLTVKLLLLM NFGGFCLILL LCQFLAKGTT RAKIIGGICV GFSVCVFAAP LSIIRTVIKT KSVEYMPFSL SLTLTISAVI WLLYGLALKD IYVAFPNVIG
201: FVLGALQMIL YVVYKYCKTP SDLVEKELEA AKLPEVSIDM VKLGTLTSPE PVAITVVRSV NTCNCNDRNA EIENGQGVRN SAATT

Arabidopsis Description

SWEET12Bidirectional sugar transporter SWEET12 [Source:UniProtKB/Swiss-Prot;Acc:O82587]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.