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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, plasma membrane

Predictor Summary:
  • plastid 3
  • extracellular 4
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 4
  • vacuole 4
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
EES06868 plasma membrane
EES14183 plasma membrane
EES15957 plasma membrane
EES17001 plasma membrane
KXG28442 plasma membrane
OQU79094 plasma membrane
OQU89754 plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48740.1 EES06868 AT3G48740.1 24027245
AT3G48740.1 EES14183 AT3G48740.1 24027245
AT3G48740.1 EES15957 AT3G48740.1 24027245
AT3G48740.1 EES17001 AT3G48740.1 24027245
AT3G48740.1 KXG28442 AT3G48740.1 24027245
AT3G48740.1 OQU79094 AT3G48740.1 24027245
AT3G48740.1 OQU89754 AT3G48740.1 24027245
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d049252_P001 Maize plasma membrane 86.16 84.98
TraesCS6D01G009600.1 Wheat plasma membrane 75.43 74.4
TraesCS6A01G009100.1 Wheat plasma membrane 74.74 74.23
HORVU6Hr1G000440.3 Barley golgi, plasma membrane 75.09 73.81
TraesCS1B01G066900.1 Wheat plasma membrane 74.05 73.79
TraesCS6D01G009700.1 Wheat plasma membrane 73.01 73.52
TraesCS6D01G012100.1 Wheat plasma membrane 74.74 73.47
TraesCS6A01G009000.1 Wheat plasma membrane 72.66 73.17
TraesCS6B01G015200.1 Wheat plasma membrane 74.39 73.13
TraesCS1A01G050400.1 Wheat plasma membrane 74.05 73.04
HORVU1Hr1G010210.2 Barley plasma membrane 73.36 72.6
TraesCS6B01G015100.1 Wheat plasma membrane 73.7 72.45
TraesCS1D01G052700.1 Wheat plasma membrane 74.05 72.3
TraesCS6B01G015300.1 Wheat golgi, plasma membrane, vacuole 71.28 71.78
TraesCSU01G206000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 74.05 71.57
TraesCS6D01G009500.1 Wheat endoplasmic reticulum, golgi, plasma membrane 73.36 70.9
Os11t0508600-01 Rice golgi, plasma membrane 73.7 70.3
Zm00001d007365_P001 Maize endoplasmic reticulum 82.7 69.48
EES15957 Sorghum golgi, plasma membrane 68.17 65.23
KRH63814 Soybean extracellular 21.45 63.92
EES17001 Sorghum golgi, plasma membrane 67.13 63.82
GSMUA_Achr3P18700_001 Banana golgi, plasma membrane, plastid 60.9 62.63
GSMUA_Achr6P23850_001 Banana golgi, plasma membrane 58.13 61.09
OQU79094 Sorghum plasma membrane 65.74 60.51
CDY69440 Canola plasma membrane 44.29 59.81
GSMUA_Achr6P07950_001 Banana golgi, plasma membrane 58.48 58.68
KRH63811 Soybean plasma membrane 50.52 56.59
VIT_17s0000g00830.t01 Wine grape plasma membrane 51.56 55.19
KRH54141 Soybean plasma membrane 49.13 55.04
KRH54140 Soybean plasma membrane 49.13 54.62
KRH59785 Soybean endoplasmic reticulum, plasma membrane 48.1 54.09
KRH41097 Soybean golgi, plasma membrane 47.06 53.54
KRH42232 Soybean endoplasmic reticulum, plasma membrane 49.48 52.19
PGSC0003DMT400011081 Potato plasma membrane 45.33 51.78
PGSC0003DMT400082699 Potato extracellular, plasma membrane 23.18 51.54
KRH01827 Soybean golgi, plasma membrane 47.75 51.49
Solyc03g097620.1.1 Tomato plasma membrane 49.13 51.45
AT5G50800.1 Thale cress plasma membrane 51.9 51.02
CDY24854 Canola golgi, plasma membrane 47.75 50.92
GSMUA_Achr10P... Banana plasma membrane 58.82 50.9
Bra010477.1-P Field mustard golgi, plasma membrane 47.75 50.74
KRH63812 Soybean endoplasmic reticulum, golgi, plasma membrane 49.48 50.71
KRH46857 Soybean golgi, plasma membrane 47.75 50.55
KRH01828 Soybean plasma membrane 47.06 50.18
CDX92666 Canola golgi, plasma membrane 47.4 50.18
CDY11047 Canola golgi, plasma membrane 47.4 50.18
KRH58347 Soybean golgi, plasma membrane 49.13 50.18
PGSC0003DMT400011076 Potato golgi, mitochondrion, plasma membrane, plastid 34.26 49.75
KRH46856 Soybean plasma membrane 46.71 49.63
Bra026487.1-P Field mustard endoplasmic reticulum, plasma membrane 47.4 49.46
Bra013854.1-P Field mustard golgi, plasma membrane 46.71 49.45
CDY03395 Canola endoplasmic reticulum, golgi, plasma membrane 46.71 49.45
CDY34333 Canola golgi, plasma membrane 46.71 49.45
CDX84877 Canola golgi, plasma membrane 46.37 49.26
Bra019560.1-P Field mustard plasma membrane 48.44 49.12
CDX77928 Canola plasma membrane 48.44 49.12
CDX87161 Canola endoplasmic reticulum 47.06 49.1
Solyc06g072620.2.1 Tomato golgi, plasma membrane 48.44 48.78
AT4G25010.1 Thale cress plasma membrane 47.4 48.75
CDY16863 Canola endoplasmic reticulum, plasma membrane 46.71 48.74
Bra040489.1-P Field mustard golgi, plasma membrane 49.13 48.3
CDY05819 Canola golgi, plasma membrane 49.13 48.3
CDX88041 Canola plasma membrane 48.1 48.26
CDX68492 Canola plasma membrane 47.75 48.25
CDX83046 Canola plasma membrane 47.75 48.25
Bra018039.1-P Field mustard plasma membrane 48.1 48.1
CDY05867 Canola plasma membrane 48.1 48.1
CDY08093 Canola plasma membrane 48.1 48.1
AT5G23660.1 Thale cress plasma membrane 47.4 48.07
Bra009700.1-P Field mustard plasma membrane 47.75 47.92
Solyc03g097610.2.1 Tomato golgi, plasma membrane 46.71 47.87
OQU89754 Sorghum plastid 44.98 47.62
Bra029914.1-P Field mustard plasma membrane 47.75 47.59
CDX80379 Canola plasma membrane 47.4 47.57
Bra019197.1-P Field mustard plasma membrane 39.1 47.48
Bra022761.1-P Field mustard golgi, plasma membrane 47.4 47.4
PGSC0003DMT400081212 Potato golgi, plasma membrane 46.71 47.2
CDX71659 Canola golgi, plasma membrane 48.1 47.12
PGSC0003DMT400081206 Potato golgi, plasma membrane 47.75 47.1
AT3G48740.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 47.06 47.06
PGSC0003DMT400083992 Potato golgi, plasma membrane 48.44 46.67
PGSC0003DMT400081210 Potato golgi, plasma membrane 47.75 46.62
Solyc03g097560.2.1 Tomato golgi, plasma membrane 47.4 46.44
VIT_01s0146g00260.t01 Wine grape golgi, plasma membrane 37.72 46.38
Solyc03g097870.2.1 Tomato golgi, plasma membrane 48.1 46.33
KRH10466 Soybean golgi, plasma membrane 39.79 46.18
EES06868 Sorghum golgi, plasma membrane, plastid 53.63 46.13
Solyc03g097580.2.1 Tomato golgi, plasma membrane 48.1 46.03
Solyc06g072630.2.1 Tomato plasma membrane 46.02 46.02
VIT_17s0000g00820.t01 Wine grape plasma membrane 42.21 45.86
Solyc03g097590.2.1 Tomato golgi, plasma membrane 47.06 45.64
Solyc05g024260.2.1 Tomato plasma membrane 46.37 45.42
AT5G50790.1 Thale cress plasma membrane 45.33 45.33
Bra012412.1-P Field mustard plasma membrane 27.34 45.14
CDY25828 Canola mitochondrion, plasma membrane 26.99 44.57
CDY08964 Canola plastid 44.29 44.44
EER92278 Sorghum golgi, plasma membrane 47.75 44.09
KRH54137 Soybean plasma membrane 47.06 44.01
Solyc03g097600.2.1 Tomato golgi, plasma membrane 44.98 43.92
AT5G13170.1 Thale cress plasma membrane 43.6 43.15
PGSC0003DMT400081211 Potato golgi, plasma membrane 43.94 42.91
KRH43976 Soybean golgi, plasma membrane, plastid 41.18 42.5
Solyc03g097570.2.1 Tomato cytosol, golgi, plasma membrane 44.64 42.43
Bra023394.1-P Field mustard plasma membrane 43.6 42.42
CDX85668 Canola endoplasmic reticulum, golgi, plasma membrane 43.6 42.42
CDX91144 Canola plasma membrane 43.6 42.42
EES14183 Sorghum plastid 45.33 42.39
CDX69663 Canola golgi, plasma membrane 43.6 42.28
CDX97233 Canola golgi, plasma membrane 43.25 41.95
KRH41096 Soybean golgi, plasma membrane 42.56 41.84
CDX78511 Canola plasma membrane 41.87 41.44
CDY53626 Canola plasma membrane 41.52 41.24
Solyc06g072640.1.1 Tomato plasma membrane 39.45 40.43
KRH59783 Soybean golgi, plasma membrane 31.83 38.98
PGSC0003DMT400021966 Potato mitochondrion 25.26 36.5
Bra006185.1-P Field mustard golgi, plasma membrane, plastid 38.41 35.13
EES19554 Sorghum golgi, plasma membrane 30.45 34.38
EES01331 Sorghum endoplasmic reticulum, plasma membrane, plastid 26.99 33.77
Bra008850.1-P Field mustard plasma membrane 24.22 33.49
EES01039 Sorghum plasma membrane 27.68 32.79
KXG33819 Sorghum extracellular, golgi 30.1 32.34
KXG32677 Sorghum golgi, plasma membrane, vacuole 26.64 31.69
EES06723 Sorghum golgi, plasma membrane, plastid 27.34 31.6
EES06744 Sorghum golgi, plasma membrane, plastid 26.99 31.2
OQU86800 Sorghum golgi, plasma membrane, vacuole 25.95 30.99
EES00047 Sorghum plasma membrane 27.34 30.5
EES20039 Sorghum golgi, plasma membrane, vacuole 23.88 28.87
KXG21564 Sorghum plasma membrane 24.22 28.46
OQU84855 Sorghum plasma membrane 23.53 25.95
EER94881 Sorghum golgi, plasma membrane 28.37 24.92
Protein Annotations
Gene3D:1.20.1280.290MapMan:24.2.6.1UniProt:A0A1B6PRZ3GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0008515GO:GO:0008643
GO:GO:0015770GO:GO:0016020GO:GO:0016021EnsemblPlants:KXG28442ProteinID:KXG28442ProteinID:KXG28442.1
PFAM:PF03083PANTHER:PTHR10791PANTHER:PTHR10791:SF56EnsemblPlantsGene:SORBI_3005G123500InterPro:SWEET_sugar_transprTMHMM:TMhelix
UniParc:UPI00081AB4E8SEG:seg::::
Description
hypothetical protein
Coordinates
chr5:-:53906531..53909045
Molecular Weight (calculated)
31502.2 Da
IEP (calculated)
9.348
GRAVY (calculated)
0.674
Length
289 amino acids
Sequence
(BLAST)
001: MAGLSLQHPM AFAFGLLGNI ISFMTYLAPL PTFYRIYKSK STQGFQSVPY VVALFSAMLW IYYALLKSNE FLLITINSAG CVIETLYIVM YLLYAPKKAK
101: LFTAKILLLL NVGVFGLILL LTLLLSAGQH RVVVLGWVCV AFSVSVFVAP LSIIRQVVRT RSVEFMPFSL SLSLTVSAVV WFLYGLLIKD KYVALPNVLG
201: FSFGVVQMGL YALYRNATPR VPPAKEVTDD DAAADGTFKL PGEHVVTIAK LTAVPAVSPQ LQEEAKPADN GTTPAPAPAN DVQLNAEQV
Best Arabidopsis Sequence Match ( AT3G48740.1 )
(BLAST)
001: MSLFNTENTW AFVFGLLGNL ISFAVFLSPV PTFYRIWKKK TTEGFQSIPY VVALFSATLW LYYATQKKDV FLLVTINAFG CFIETIYISM FLAYAPKPAR
101: MLTVKMLLLM NFGGFCAILL LCQFLVKGAT RAKIIGGICV GFSVCVFAAP LSIIRTVIKT RSVEYMPFSL SLTLTISAVI WLLYGLALKD IYVAFPNVLG
201: FALGALQMIL YVVYKYCKTS PHLGEKEVEA AKLPEVSLDM LKLGTVSSPE PISVVRQANK CTCGNDRRAE IEDGQTPKHG KQSSSAAAT
Arabidopsis Description
SWEET11Bidirectional sugar transporter SWEET11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMM5]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.