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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 3
  • golgi 2
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:golgi
Plant-mPloc:plasma membrane
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G010210.2 plasma membrane
HORVU5Hr1G076770.1 plasma membrane
HORVU6Hr1G000440.3 plasma membrane
HORVU6Hr1G089540.2 plasma membrane
HORVU6Hr1G089600.1 plasma membrane
HORVU7Hr1G030160.1 plasma membrane
HORVU7Hr1G054710.1 plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48740.1 HORVU1Hr1G010210.2 AT3G48740.1 24027245
AT3G48740.1 HORVU5Hr1G076770.1 AT3G48740.1 24027245
AT3G48740.1 HORVU6Hr1G000440.3 AT3G48740.1 24027245
AT3G48740.1 HORVU6Hr1G089540.2 AT3G48740.1 24027245
AT3G48740.1 HORVU6Hr1G089600.1 AT3G48740.1 24027245
AT3G48740.1 HORVU7Hr1G030160.1 AT3G48740.1 24027245
AT3G48740.1 HORVU7Hr1G054710.1 AT3G48740.1 24027245
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G052700.1 Wheat plasma membrane 93.15 91.89
TraesCS1B01G066900.1 Wheat plasma membrane 89.38 90.0
TraesCS1A01G050400.1 Wheat plasma membrane 89.73 89.42
HORVU6Hr1G000440.3 Barley golgi, plasma membrane 83.9 83.33
KXG28442 Sorghum golgi, plasma membrane 72.6 73.36
Zm00001d049252_P001 Maize plasma membrane 72.6 72.35
Os11t0508600-01 Rice golgi, plasma membrane 73.63 70.96
HORVU6Hr1G089540.2 Barley golgi, plasma membrane 63.01 63.67
KRH63814 Soybean extracellular 20.89 62.89
Zm00001d007365_P001 Maize endoplasmic reticulum 73.29 62.21
GSMUA_Achr6P23850_001 Banana golgi, plasma membrane 57.19 60.73
GSMUA_Achr3P18700_001 Banana golgi, plasma membrane, plastid 57.53 59.79
GSMUA_Achr6P07950_001 Banana golgi, plasma membrane 57.19 57.99
CDY69440 Canola plasma membrane 41.44 56.54
KRH63811 Soybean plasma membrane 49.66 56.2
KRH54140 Soybean plasma membrane 48.97 55.0
KRH59785 Soybean endoplasmic reticulum, plasma membrane 48.29 54.86
KRH41097 Soybean golgi, plasma membrane 47.26 54.33
KRH54141 Soybean plasma membrane 47.95 54.26
VIT_17s0000g00830.t01 Wine grape plasma membrane 50.0 54.07
KRH42232 Soybean endoplasmic reticulum, plasma membrane 49.66 52.92
Bra010477.1-P Field mustard golgi, plasma membrane 48.97 52.57
CDY24854 Canola golgi, plasma membrane 48.63 52.4
CDY03395 Canola endoplasmic reticulum, golgi, plasma membrane 48.97 52.38
CDY34333 Canola golgi, plasma membrane 48.97 52.38
AT4G25010.1 Thale cress plasma membrane 50.34 52.31
KRH01827 Soybean golgi, plasma membrane 47.95 52.24
Bra013854.1-P Field mustard golgi, plasma membrane 48.63 52.01
KRH46857 Soybean golgi, plasma membrane 48.63 52.01
HORVU6Hr1G089600.1 Barley golgi, mitochondrion, peroxisome 62.67 51.99
KRH58347 Soybean golgi, plasma membrane 50.34 51.94
KRH63812 Soybean endoplasmic reticulum, golgi, plasma membrane 50.0 51.77
KRH01828 Soybean plasma membrane 47.95 51.66
CDX92666 Canola golgi, plasma membrane 48.29 51.65
CDY11047 Canola golgi, plasma membrane 48.29 51.65
Bra019560.1-P Field mustard plasma membrane 50.34 51.58
CDX77928 Canola plasma membrane 50.34 51.58
Bra026487.1-P Field mustard endoplasmic reticulum, plasma membrane 48.63 51.26
CDX87161 Canola endoplasmic reticulum 48.63 51.26
CDX68492 Canola plasma membrane 50.0 51.05
CDX83046 Canola plasma membrane 50.0 51.05
KRH46856 Soybean plasma membrane 47.26 50.74
CDY16863 Canola endoplasmic reticulum, plasma membrane 47.95 50.54
Bra029914.1-P Field mustard plasma membrane 50.0 50.34
Bra018039.1-P Field mustard plasma membrane 49.66 50.17
CDY05867 Canola plasma membrane 49.66 50.17
CDY08093 Canola plasma membrane 49.66 50.17
AT5G50800.1 Thale cress plasma membrane 50.34 50.0
AT3G48740.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 49.32 49.83
GSMUA_Achr10P... Banana plasma membrane 56.85 49.7
Solyc03g097620.1.1 Tomato plasma membrane 46.92 49.64
Bra019197.1-P Field mustard plasma membrane 40.41 49.58
PGSC0003DMT400011081 Potato plasma membrane 42.81 49.41
PGSC0003DMT400082699 Potato extracellular, plasma membrane 21.92 49.23
AT5G23660.1 Thale cress plasma membrane 47.95 49.12
Solyc06g072620.2.1 Tomato golgi, plasma membrane 47.95 48.78
Bra009700.1-P Field mustard plasma membrane 47.95 48.61
CDX88041 Canola plasma membrane 47.95 48.61
CDX80379 Canola plasma membrane 47.6 48.26
PGSC0003DMT400011076 Potato golgi, mitochondrion, plasma membrane, plastid 32.88 48.24
Solyc03g097610.2.1 Tomato golgi, plasma membrane 46.23 47.87
Bra040489.1-P Field mustard golgi, plasma membrane 47.95 47.62
CDY05819 Canola golgi, plasma membrane 47.95 47.62
VIT_01s0146g00260.t01 Wine grape golgi, plasma membrane 38.01 47.23
CDX71659 Canola golgi, plasma membrane 47.6 47.12
VIT_17s0000g00820.t01 Wine grape plasma membrane 42.81 46.99
CDY08964 Canola plastid 46.23 46.88
PGSC0003DMT400081212 Potato golgi, plasma membrane 45.89 46.85
PGSC0003DMT400081206 Potato golgi, plasma membrane 46.92 46.76
CDX84877 Canola golgi, plasma membrane 43.49 46.69
PGSC0003DMT400081210 Potato golgi, plasma membrane 47.26 46.62
Solyc03g097560.2.1 Tomato golgi, plasma membrane 46.92 46.44
Bra012412.1-P Field mustard plasma membrane 27.74 46.29
HORVU7Hr1G030160.1 Barley plasma membrane 49.32 46.01
CDY25828 Canola mitochondrion, plasma membrane 27.4 45.71
Solyc03g097590.2.1 Tomato golgi, plasma membrane 46.58 45.64
Solyc03g097580.2.1 Tomato golgi, plasma membrane 46.92 45.36
PGSC0003DMT400083992 Potato golgi, plasma membrane 46.58 45.33
Solyc03g097870.2.1 Tomato golgi, plasma membrane 46.58 45.33
KRH54137 Soybean plasma membrane 47.6 44.98
Solyc06g072630.2.1 Tomato plasma membrane 44.52 44.98
KRH10466 Soybean golgi, plasma membrane 38.36 44.98
Solyc03g097600.2.1 Tomato golgi, plasma membrane 45.55 44.93
Solyc05g024260.2.1 Tomato plasma membrane 45.21 44.75
PGSC0003DMT400081211 Potato golgi, plasma membrane 45.21 44.59
Bra022761.1-P Field mustard golgi, plasma membrane 43.84 44.29
CDX78511 Canola plasma membrane 44.18 44.18
HORVU3Hr1G013170.1 Barley golgi, plasma membrane 47.26 43.95
CDY53626 Canola plasma membrane 43.49 43.64
AT5G13170.1 Thale cress plasma membrane 43.49 43.49
CDX69663 Canola golgi, plasma membrane 43.84 42.95
CDX97233 Canola golgi, plasma membrane 43.84 42.95
AT5G50790.1 Thale cress plasma membrane 42.12 42.56
KRH43976 Soybean golgi, plasma membrane, plastid 40.75 42.5
KRH41096 Soybean golgi, plasma membrane 42.47 42.18
Solyc03g097570.2.1 Tomato cytosol, golgi, plasma membrane 43.49 41.78
Bra023394.1-P Field mustard plasma membrane 42.47 41.75
CDX85668 Canola endoplasmic reticulum, golgi, plasma membrane 42.47 41.75
CDX91144 Canola plasma membrane 42.47 41.75
HORVU5Hr1G076770.1 Barley golgi, plasma membrane 44.86 40.81
Solyc06g072640.1.1 Tomato plasma membrane 39.38 40.78
KRH59783 Soybean golgi, plasma membrane 32.19 39.83
Bra006185.1-P Field mustard golgi, plasma membrane, plastid 40.75 37.66
HORVU7Hr1G054710.1 Barley plasma membrane 38.7 37.29
PGSC0003DMT400021966 Potato mitochondrion 24.32 35.5
HORVU2Hr1G006520.1 Barley peroxisome, plasma membrane, vacuole 28.08 35.19
HORVU2Hr1G006510.1 Barley plasma membrane 28.77 34.15
HORVU6Hr1G055960.1 Barley golgi, plasma membrane, plastid 29.11 34.0
Bra008850.1-P Field mustard plasma membrane 24.32 33.97
HORVU0Hr1G010080.2 Barley plasma membrane 28.08 30.48
HORVU3Hr1G091230.10 Barley plasma membrane 29.79 29.79
HORVU7Hr1G117490.1 Barley plasma membrane 26.03 29.23
HORVU1Hr1G079940.2 Barley peroxisome, plasma membrane, plastid 28.42 28.92
HORVU6Hr1G029520.4 Barley plastid 28.08 26.54
HORVU1Hr1G029920.4 Barley plasma membrane 22.26 26.21
Protein Annotations
EMBL:AK363447EnsemblPlants:HORVU1Hr1G010210.2EnsemblPlantsGene:HORVU1Hr1G010210Gene3D:1.20.1280.290GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0008643GO:GO:0016020GO:GO:0016021
InterPro:SWEET_sugar_transprPANTHER:PTHR10791PANTHER:PTHR10791:SF56PFAM:PF03083SEG:segTMHMM:TMhelix
UniParc:UPI00020063FCUniProt:F2DHT0MapMan:24.2.6.1:::
Description
Bidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:F2DHT0]
Coordinates
chrchr1H:+:23166698..23169065
Molecular Weight (calculated)
31944.8 Da
IEP (calculated)
8.785
GRAVY (calculated)
0.610
Length
292 amino acids
Sequence
(BLAST)
001: MGGLSAQHPW AFTFGLLGNV ISFMTYLAPL PTFYRIYKNK STQGFQSVPY VVALFSAMLW IYYALLKSDE YLLITINTAG CVIETIYIVL YLAYAPKQAR
101: LFTAKILLLL NVGVFGLILL LTLLLTAGER RVVMLGWVCV GFSVCVFVAP LSVIRLVVRT RSVEFMPFSL SLSLTASAVV WFLYGLLIKD KYVALPNILG
201: FAFGVIQMGL YALYRNATPI PAPKEMDAPE SEDGAVKAPE HVVNIAKLGT AAAAIELNTN HPVEPPPPMK EGTAKACATG EKLDKATHVE QV
Best Arabidopsis Sequence Match ( AT3G48740.1 )
(BLAST)
001: MSLFNTENTW AFVFGLLGNL ISFAVFLSPV PTFYRIWKKK TTEGFQSIPY VVALFSATLW LYYATQKKDV FLLVTINAFG CFIETIYISM FLAYAPKPAR
101: MLTVKMLLLM NFGGFCAILL LCQFLVKGAT RAKIIGGICV GFSVCVFAAP LSIIRTVIKT RSVEYMPFSL SLTLTISAVI WLLYGLALKD IYVAFPNVLG
201: FALGALQMIL YVVYKYCKTS PHLGEKEVEA AKLPEVSLDM LKLGTVSSPE PISVVRQANK CTCGNDRRAE IEDGQTPKHG KQSSSAAAT
Arabidopsis Description
SWEET11Bidirectional sugar transporter SWEET11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMM5]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.