Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, peroxisome, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU1Hr1G079940.2 | plasma membrane, plasma membrane |
| HORVU1Hr1G082010.3 | |
| HORVU2Hr1G006510.1 | plasma membrane, plasma membrane |
| HORVU2Hr1G006520.1 | plasma membrane, plasma membrane |
| HORVU3Hr1G030760.2 | |
| HORVU3Hr1G069970.2 | |
| HORVU7Hr1G075700.2 | |
| HORVU7Hr1G081290.4 | |
| HORVU7Hr1G117490.1 | plasma membrane, plasma membrane |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G360900.1 | Wheat | plasma membrane | 76.66 | 89.07 |
| TraesCS1B01G377200.1 | Wheat | plasma membrane | 76.31 | 88.66 |
| TraesCS1D01G365200.1 | Wheat | plasma membrane | 75.96 | 88.26 |
| HORVU2Hr1G006510.1 | Barley | plasma membrane | 73.87 | 86.18 |
| EES01039 | Sorghum | plasma membrane | 66.55 | 78.28 |
| Zm00001d044421_P001 | Maize | plasma membrane | 65.16 | 76.64 |
| Zm00001d011299_P001 | Maize | plasma membrane | 64.11 | 75.72 |
| HORVU7Hr1G117490.1 | Barley | plasma membrane | 68.29 | 75.38 |
| Os01t0605700-01 | Rice | golgi, plasma membrane, plastid | 64.11 | 72.44 |
| Os01t0606000-00 | Rice | plasma membrane | 64.46 | 71.43 |
| HORVU2Hr1G006520.1 | Barley | peroxisome, plasma membrane, vacuole | 56.1 | 69.1 |
| GSMUA_Achr10P... | Banana | extracellular, golgi, plasma membrane | 55.05 | 67.52 |
| GSMUA_Achr6P09180_001 | Banana | plasma membrane | 54.36 | 66.38 |
| VIT_17s0000g08110.t01 | Wine grape | cytosol, golgi, plasma membrane | 48.78 | 59.83 |
| CDY49756 | Canola | plasma membrane | 49.83 | 58.37 |
| Bra033034.1-P | Field mustard | plasma membrane | 49.83 | 58.37 |
| VIT_14s0066g01420.t01 | Wine grape | plasma membrane | 51.57 | 58.27 |
| Bra025317.1-P | Field mustard | plasma membrane | 49.83 | 57.66 |
| Solyc03g114200.2.1 | Tomato | golgi, plasma membrane, plastid | 47.39 | 57.63 |
| KRH20314 | Soybean | plasma membrane | 48.78 | 57.14 |
| CDY04003 | Canola | plasma membrane | 48.78 | 56.68 |
| KRG93335 | Soybean | plasma membrane | 48.43 | 56.5 |
| KRG93333 | Soybean | plasma membrane | 48.08 | 56.1 |
| Solyc06g071400.2.1 | Tomato | cytosol, golgi, plasma membrane | 46.34 | 55.88 |
| CDY16757 | Canola | extracellular, peroxisome, plasma membrane | 46.69 | 55.83 |
| AT3G28007.1 | Thale cress | plasma membrane | 48.78 | 55.78 |
| PGSC0003DMT400069697 | Potato | cytosol, golgi, plasma membrane | 45.99 | 55.46 |
| CDY56741 | Canola | plasma membrane | 46.34 | 55.42 |
| Bra035879.1-P | Field mustard | extracellular, golgi, plasma membrane | 46.34 | 55.42 |
| CDY30733 | Canola | extracellular, golgi, plasma membrane | 46.34 | 55.42 |
| Bra029245.1-P | Field mustard | extracellular, golgi, plasma membrane | 46.34 | 55.42 |
| CDY45751 | Canola | extracellular, golgi, plasma membrane | 45.99 | 55.0 |
| Solyc02g086920.1.1 | Tomato | golgi, plasma membrane | 43.21 | 53.22 |
| Bra029244.1-P | Field mustard | plasma membrane | 44.25 | 52.92 |
| AT5G62850.1 | Thale cress | plasma membrane | 44.25 | 52.92 |
| CDY30734 | Canola | plasma membrane | 44.25 | 52.92 |
| HORVU6Hr1G055960.1 | Barley | golgi, plasma membrane, plastid | 45.99 | 52.8 |
| PGSC0003DMT400001425 | Potato | golgi, plasma membrane | 32.06 | 50.83 |
| CDY36831 | Canola | plasma membrane | 41.81 | 50.42 |
| AT5G40260.1 | Thale cress | plasma membrane | 41.81 | 50.21 |
| KRH57053 | Soybean | plasma membrane | 39.37 | 50.0 |
| CDY44578 | Canola | plasma membrane | 41.46 | 50.0 |
| Bra025595.1-P | Field mustard | plasma membrane | 41.12 | 49.58 |
| KRH03315 | Soybean | golgi, plasma membrane, plastid | 39.02 | 49.56 |
| CDX86454 | Canola | plasma membrane, plastid | 51.22 | 49.49 |
| VIT_17s0000g08130.t01 | Wine grape | golgi, plasma membrane, vacuole | 26.48 | 49.35 |
| CDY44448 | Canola | plasma membrane, plastid | 51.57 | 49.01 |
| CDX84358 | Canola | plasma membrane | 31.71 | 43.54 |
| Solyc11g028270.1.1 | Tomato | extracellular | 25.78 | 41.34 |
| CDY45750 | Canola | cytosol, golgi, plasma membrane | 39.37 | 39.1 |
| HORVU3Hr1G091230.10 | Barley | plasma membrane | 34.84 | 34.25 |
| HORVU0Hr1G010080.2 | Barley | plasma membrane | 31.36 | 33.46 |
| HORVU1Hr1G029920.4 | Barley | plasma membrane | 27.53 | 31.85 |
| HORVU6Hr1G029520.4 | Barley | plastid | 32.75 | 30.42 |
| HORVU6Hr1G089540.2 | Barley | golgi, plasma membrane | 30.31 | 30.1 |
| HORVU1Hr1G010210.2 | Barley | plasma membrane | 28.92 | 28.42 |
| HORVU6Hr1G000440.3 | Barley | golgi, plasma membrane | 28.22 | 27.55 |
| HORVU7Hr1G030160.1 | Barley | plasma membrane | 29.62 | 27.16 |
| HORVU3Hr1G013170.1 | Barley | golgi, plasma membrane | 29.27 | 26.75 |
| HORVU5Hr1G076770.1 | Barley | golgi, plasma membrane | 28.22 | 25.23 |
| HORVU6Hr1G089600.1 | Barley | golgi, mitochondrion, peroxisome | 30.31 | 24.72 |
| HORVU7Hr1G054710.1 | Barley | plasma membrane | 25.78 | 24.42 |
Protein Annotations
| Gene3D:1.20.1280.290 | MapMan:24.2.6.1 | UniProt:A0A287GF62 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008643 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:HORVU1Hr1G079940 |
| EnsemblPlants:HORVU1Hr1G079940.2 | PFAM:PF03083 | PANTHER:PTHR10791 | PANTHER:PTHR10791:SF68 | InterPro:SWEET_sugar_transpr | TMHMM:TMhelix |
| UniParc:UPI000B4863C9 | SEG:seg | : | : | : | : |
Description
Bidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:A0A287GF62]
Coordinates
chrchr1H:+:524164619..524166874
Molecular Weight (calculated)
31725.4 Da
IEP (calculated)
9.399
GRAVY (calculated)
0.466
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: RTYPEPQHAY ISSARPPCFD HPKSPSRFHK SSCVPGDQDS KMVSTEAARN IVGIIGNVIS FGLFLSPAPT FWRIIKAKDV EEFKPDPYLA TLLNCMLWVF
101: YGLPIVHPNS ILVVTINGIG LLIEGAYLIV FFIYATRNTR LKMLGVLAIE ALFMVAVVAG VLLGAHTHEK RSMIVGILCV IFGSIMYASP LTIMGKVIRT
201: KSVEYMPFFL SLVNFLNGGC WTAYALIKFD LYITIPNGLG TLFGLAQLIL YLCYYWSTPK KGKSVELPTI AAKNTVDSSK VSVTVEK
101: YGLPIVHPNS ILVVTINGIG LLIEGAYLIV FFIYATRNTR LKMLGVLAIE ALFMVAVVAG VLLGAHTHEK RSMIVGILCV IFGSIMYASP LTIMGKVIRT
201: KSVEYMPFFL SLVNFLNGGC WTAYALIKFD LYITIPNGLG TLFGLAQLIL YLCYYWSTPK KGKSVELPTI AAKNTVDSSK VSVTVEK
001: MTDPHTARTI VGIVGNVISF GLFCAPIPTM VKIWKMKSVS EFKPDPYVAT VLNCMMWTFY GLPFVQPDSL LVITINGTGL FMELVYVTIF FVFATSPVRR
101: KITIAMVIEV IFMAVVIFCT MYFLHTTKQR SMLIGILCIV FNVIMYAAPL TVMKLVIKTK SVKYMPFFLS LANFMNGVVW VIYACLKFDP YILIPNGLGS
201: LSGIIQLIIY ITYYKTTNWN DDDEDKEKRY SNAGIELGQA
101: KITIAMVIEV IFMAVVIFCT MYFLHTTKQR SMLIGILCIV FNVIMYAAPL TVMKLVIKTK SVKYMPFFLS LANFMNGVVW VIYACLKFDP YILIPNGLGS
201: LSGIIQLIIY ITYYKTTNWN DDDEDKEKRY SNAGIELGQA
Arabidopsis Description
SWEET5Bidirectional sugar transporter SWEET5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM10]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.