Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1A01G346800.3 | |
| TraesCS1A01G360900.1 | plasma membrane, plasma membrane |
| TraesCS1B01G360800.1 | |
| TraesCS1B01G377200.1 | plasma membrane, plasma membrane |
| TraesCS1D01G349700.1 | |
| TraesCS1D01G365200.1 | plasma membrane, plasma membrane |
| TraesCS2A01G043200.1 | plasma membrane, plasma membrane |
| TraesCS2A01G043400.1 | plasma membrane, plasma membrane |
| TraesCS2A01G051800.1 | plasma membrane, plasma membrane |
| TraesCS2B01G055700.1 | plasma membrane, plasma membrane |
| TraesCS2B01G055800.1 | plasma membrane, plasma membrane |
| TraesCS2B01G055900.1 | plasma membrane, plasma membrane |
| TraesCS2B01G056000.2 | plasma membrane, plasma membrane |
| TraesCS2B01G056100.1 | plasma membrane, plasma membrane |
| TraesCS2D01G042400.1 | plasma membrane, plasma membrane |
| TraesCS2D01G042500.1 | plasma membrane, plasma membrane |
| TraesCS2D01G042600.1 | plasma membrane, plasma membrane |
| TraesCS2D01G052100.1 | plasma membrane, plasma membrane |
| TraesCS3A01G151200.1 | |
| TraesCS3A01G278800.1 | |
| TraesCS3B01G178100.1 | |
| TraesCS3B01G313000.1 | |
| TraesCS3D01G159100.1 | |
| TraesCS3D01G227000.1 | plasma membrane, plasma membrane |
| TraesCS3D01G279100.1 | |
| TraesCS7A01G159800.1 | plasma membrane, plasma membrane |
| TraesCS7A01G341800.1 | |
| TraesCS7A01G503100.1 | plasma membrane, plasma membrane |
| TraesCS7A01G503200.1 | plasma membrane, plasma membrane |
| TraesCS7A01G503300.1 | plasma membrane, plasma membrane |
| TraesCS7A01G533900.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064300.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064400.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064500.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064600.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064700.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064800.1 | plasma membrane, plasma membrane |
| TraesCS7B01G241100.1 | |
| TraesCS7B01G410700.1 | plasma membrane, plasma membrane |
| TraesCS7B01G410800.1 | plasma membrane, plasma membrane |
| TraesCS7B01G451200.1 | plasma membrane, plasma membrane |
| TraesCS7D01G160600.1 | plasma membrane, plasma membrane |
| TraesCS7D01G337800.1 | |
| TraesCS7D01G490600.1 | plasma membrane, plasma membrane |
| TraesCS7D01G521400.1 | plasma membrane, plasma membrane |
| TraesCSU01G013200.1 | plasma membrane, plasma membrane |
| TraesCSU01G013400.1 | plasma membrane, plasma membrane |
| TraesCSU01G162000.1 | plasma membrane, plasma membrane |
| TraesCSU01G181700.1 | plasma membrane, plasma membrane |
| TraesCSU01G191700.1 | plasma membrane, plasma membrane |
| TraesCSU01G232400.1 | plasma membrane, plasma membrane |
| TraesCSU01G249000.1 | plasma membrane, plasma membrane |
| TraesCSU01G249100.1 | plasma membrane, plasma membrane |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G360900.1 | Wheat | plasma membrane | 97.98 | 97.98 |
| TraesCS1D01G365200.1 | Wheat | plasma membrane | 97.98 | 97.98 |
| TraesCS7B01G410700.1 | Wheat | plasma membrane | 86.23 | 86.59 |
| TraesCS2B01G055900.1 | Wheat | plasma membrane | 84.62 | 84.96 |
| TraesCS7B01G451200.1 | Wheat | plasma membrane | 83.4 | 84.77 |
| TraesCS7B01G064600.1 | Wheat | plasma membrane | 84.21 | 84.55 |
| TraesCS7B01G064400.1 | Wheat | plasma membrane | 84.21 | 84.55 |
| TraesCS2B01G056100.1 | Wheat | plasma membrane | 83.4 | 83.74 |
| TraesCS7B01G064300.1 | Wheat | plasma membrane | 83.4 | 83.74 |
| TraesCS7B01G064700.1 | Wheat | plasma membrane | 82.59 | 82.93 |
| TraesCS7B01G064500.1 | Wheat | plasma membrane | 64.37 | 81.54 |
| EES01039 | Sorghum | plasma membrane | 80.16 | 81.15 |
| Zm00001d044421_P001 | Maize | plasma membrane | 78.95 | 79.92 |
| TraesCS7B01G410800.1 | Wheat | golgi, plasma membrane, vacuole | 57.89 | 79.89 |
| Zm00001d011299_P001 | Maize | plasma membrane | 77.73 | 79.01 |
| TraesCS7B01G064800.1 | Wheat | plasma membrane | 65.59 | 78.64 |
| HORVU1Hr1G079940.2 | Barley | peroxisome, plasma membrane, plastid | 88.66 | 76.31 |
| Os01t0605700-01 | Rice | golgi, plasma membrane, plastid | 75.71 | 73.62 |
| Os01t0606000-00 | Rice | plasma membrane | 76.11 | 72.59 |
| TraesCS2B01G055800.1 | Wheat | plasma membrane | 84.21 | 72.22 |
| GSMUA_Achr10P... | Banana | extracellular, golgi, plasma membrane | 65.99 | 69.66 |
| TraesCS2B01G056000.2 | Wheat | plasma membrane | 75.3 | 67.88 |
| GSMUA_Achr6P09180_001 | Banana | plasma membrane | 63.56 | 66.81 |
| TraesCS2B01G055700.1 | Wheat | plasma membrane | 61.54 | 65.24 |
| VIT_17s0000g08110.t01 | Wine grape | cytosol, golgi, plasma membrane | 55.87 | 58.97 |
| VIT_14s0066g01420.t01 | Wine grape | plasma membrane | 60.32 | 58.66 |
| CDY49756 | Canola | plasma membrane | 56.68 | 57.14 |
| Bra033034.1-P | Field mustard | plasma membrane | 56.68 | 57.14 |
| Bra025317.1-P | Field mustard | plasma membrane | 57.09 | 56.85 |
| KRH20314 | Soybean | plasma membrane | 55.87 | 56.33 |
| KRG93333 | Soybean | plasma membrane | 55.47 | 55.69 |
| KRG93335 | Soybean | plasma membrane | 55.47 | 55.69 |
| CDY04003 | Canola | plasma membrane | 55.47 | 55.47 |
| CDY56741 | Canola | plasma membrane | 53.85 | 55.42 |
| Solyc03g114200.2.1 | Tomato | golgi, plasma membrane, plastid | 52.63 | 55.08 |
| PGSC0003DMT400069697 | Potato | cytosol, golgi, plasma membrane | 53.04 | 55.04 |
| Solyc06g071400.2.1 | Tomato | cytosol, golgi, plasma membrane | 53.04 | 55.04 |
| AT3G28007.1 | Thale cress | plasma membrane | 55.87 | 54.98 |
| CDY16757 | Canola | extracellular, peroxisome, plasma membrane | 53.04 | 54.58 |
| CDY45751 | Canola | extracellular, golgi, plasma membrane | 53.04 | 54.58 |
| Bra035879.1-P | Field mustard | extracellular, golgi, plasma membrane | 52.63 | 54.17 |
| CDY30733 | Canola | extracellular, golgi, plasma membrane | 52.63 | 54.17 |
| Bra029245.1-P | Field mustard | extracellular, golgi, plasma membrane | 52.63 | 54.17 |
| Solyc02g086920.1.1 | Tomato | golgi, plasma membrane | 50.2 | 53.22 |
| AT5G62850.1 | Thale cress | plasma membrane | 50.61 | 52.08 |
| PGSC0003DMT400001425 | Potato | golgi, plasma membrane | 38.06 | 51.93 |
| CDY30734 | Canola | plasma membrane | 50.2 | 51.67 |
| Bra029244.1-P | Field mustard | plasma membrane | 50.2 | 51.67 |
| TraesCS6B01G248300.1 | Wheat | plasma membrane | 52.63 | 50.98 |
| CDY36831 | Canola | plasma membrane | 47.77 | 49.58 |
| KRH57053 | Soybean | plasma membrane | 45.34 | 49.56 |
| KRH03315 | Soybean | golgi, plasma membrane, plastid | 45.34 | 49.56 |
| VIT_17s0000g08130.t01 | Wine grape | golgi, plasma membrane, vacuole | 30.77 | 49.35 |
| CDY44578 | Canola | plasma membrane | 46.56 | 48.32 |
| Bra025595.1-P | Field mustard | plasma membrane | 46.15 | 47.9 |
| AT5G40260.1 | Thale cress | plasma membrane | 46.15 | 47.7 |
| CDX86454 | Canola | plasma membrane, plastid | 57.09 | 47.47 |
| CDY44448 | Canola | plasma membrane, plastid | 57.09 | 46.69 |
| TraesCS1B01G276000.1 | Wheat | golgi, plasma membrane, vacuole | 48.58 | 45.98 |
| CDX84358 | Canola | plasma membrane | 36.44 | 43.06 |
| TraesCS3B01G441800.1 | Wheat | golgi, plasma membrane | 46.96 | 42.34 |
| Solyc11g028270.1.1 | Tomato | extracellular | 29.96 | 41.34 |
| TraesCS3B01G287200.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 38.06 | 40.69 |
| CDY45750 | Canola | cytosol, golgi, plasma membrane | 43.72 | 37.37 |
| TraesCS6B01G421600.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 28.74 | 37.17 |
| TraesCS6B01G176800.1 | Wheat | plasma membrane | 34.82 | 35.98 |
| TraesCS5B01G040700.1 | Wheat | golgi, plasma membrane, vacuole | 34.82 | 35.1 |
| TraesCS5B01G040800.1 | Wheat | plasma membrane | 35.22 | 32.34 |
| TraesCS1B01G147200.1 | Wheat | plasma membrane | 31.17 | 31.3 |
| TraesCS4B01G166600.1 | Wheat | golgi, plasma membrane, plastid, vacuole | 37.65 | 30.69 |
| TraesCS1B01G066900.1 | Wheat | plasma membrane | 34.01 | 28.97 |
| TraesCS5B01G288600.1 | Wheat | plasma membrane | 33.6 | 28.92 |
| TraesCS6B01G421800.1 | Wheat | plasma membrane | 33.6 | 28.62 |
| TraesCS6B01G421500.1 | Wheat | plasma membrane | 34.01 | 28.57 |
| TraesCS6B01G421700.1 | Wheat | plasma membrane | 32.79 | 28.42 |
| TraesCS6B01G015100.1 | Wheat | plasma membrane | 33.2 | 27.89 |
| TraesCS4B01G182000.1 | Wheat | golgi, plasma membrane | 33.6 | 27.85 |
| TraesCS6B01G015200.1 | Wheat | plasma membrane | 32.79 | 27.55 |
| TraesCS7B01G050500.1 | Wheat | plasma membrane | 34.01 | 27.27 |
| TraesCS6B01G015300.1 | Wheat | golgi, plasma membrane, vacuole | 31.58 | 27.18 |
| TraesCS7B01G160000.1 | Wheat | plasma membrane | 30.36 | 24.51 |
Protein Annotations
| EnsemblPlants:TraesCS1B01G377200.1 | EnsemblPlantsGene:TraesCS1B01G377200 | Gene3D:1.20.1280.290 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:SWEET_sugar_transpr | PANTHER:PTHR10791 | PANTHER:PTHR10791:SF68 | PFAM:PF03083 | SEG:seg | TMHMM:TMhelix |
| MapMan:24.2.6.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1B:-:608994669..608996436
Molecular Weight (calculated)
27068.1 Da
IEP (calculated)
9.724
GRAVY (calculated)
0.720
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSTDAARNI VGIVGNVISF GLFLSPVPTF WRIIKAKDVE EFKPDPYLAT LLNCMLWVFY GLPIVHPNSI LVVTINGIGL VIESAYLIIF FIYATRNTRL
101: KMLGVLTAEA LFMVAVVAGV LLGAHTHEKR SMIVGILCVI FGSVMYASPL TIMGKVIKTR SVEYMPFVLS LVNFLNGCCW TGYALIKFDL YITIPNGLGA
201: IFGLAQLILY GCYYRSTPKK GKNVELPTVK VTKNSVGGGR VSVTVEK
101: KMLGVLTAEA LFMVAVVAGV LLGAHTHEKR SMIVGILCVI FGSVMYASPL TIMGKVIKTR SVEYMPFVLS LVNFLNGCCW TGYALIKFDL YITIPNGLGA
201: IFGLAQLILY GCYYRSTPKK GKNVELPTVK VTKNSVGGGR VSVTVEK
001: MVHEQLNLIR KIVGILGNFI SLCLFLSPTP TFIHIVKKKS VEKYSPLPYL ATLLNCLVRA LYGLPMVHPD STLLVTISGI GITIEIVFLT IFFVFCGRQQ
101: HRLVISAVLT VQVVFVATLA VLVLTLEHTT DQRTISVGIV SCVFNAMMYA SPLSVMKMVI KTKSLEFMPF LLSVVGFLNA GVWTIYGFVP FDPFLAIPNG
201: IGCVFGLVQL ILYGTYYKST KGIMEERKNR LGYVGEVGLS NAIAQTEPEN IPYLNKRVSG V
101: HRLVISAVLT VQVVFVATLA VLVLTLEHTT DQRTISVGIV SCVFNAMMYA SPLSVMKMVI KTKSLEFMPF LLSVVGFLNA GVWTIYGFVP FDPFLAIPNG
201: IGCVFGLVQL ILYGTYYKST KGIMEERKNR LGYVGEVGLS NAIAQTEPEN IPYLNKRVSG V
Arabidopsis Description
SWEET6Bidirectional sugar transporter SWEET6 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9M9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.