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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:golgi
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDY36831 plasma membrane
CDY44578 plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G40260.1 CDY36831 AT5G40260.1 24027245
AT5G40260.1 CDY44578 AT5G40260.1 24027245
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra025595.1-P Field mustard plasma membrane 99.58 99.58
CDY36831 Canola plasma membrane 95.38 95.38
AT5G40260.1 Thale cress plasma membrane 71.85 71.55
Os09t0256650-00 Rice extracellular 22.27 54.08
HORVU2Hr1G006520.1 Barley peroxisome, plasma membrane, vacuole 48.74 49.79
TraesCS2A01G043200.1 Wheat plasma membrane 48.32 49.36
TraesCS2B01G055700.1 Wheat plasma membrane 48.32 49.36
TraesCS2D01G042400.1 Wheat plasma membrane 48.32 49.36
TraesCS7B01G410700.1 Wheat plasma membrane 50.42 48.78
TraesCS7A01G533900.1 Wheat plasma membrane 49.16 48.15
TraesCS7D01G521400.1 Wheat plasma membrane 49.16 48.15
EES20039 Sorghum golgi, plasma membrane, vacuole 48.32 48.12
TraesCS7B01G451200.1 Wheat plasma membrane 48.74 47.74
TraesCS7A01G503100.1 Wheat plasma membrane 49.16 47.37
Solyc02g086920.1.1 Tomato golgi, plasma membrane 46.22 47.21
TraesCS2B01G056100.1 Wheat plasma membrane 48.74 47.15
TraesCS7D01G160600.1 Wheat plasma membrane 48.74 47.15
TraesCS1A01G360900.1 Wheat plasma membrane 48.74 46.96
TraesCS1D01G365200.1 Wheat plasma membrane 48.74 46.96
Zm00001d011299_P001 Maize plasma membrane 47.9 46.91
TraesCS2B01G055900.1 Wheat plasma membrane 48.32 46.75
TraesCSU01G013400.1 Wheat plasma membrane 48.32 46.75
TraesCS7B01G064800.1 Wheat plasma membrane 40.34 46.6
TraesCS1B01G377200.1 Wheat plasma membrane 48.32 46.56
HORVU2Hr1G006510.1 Barley plasma membrane 47.9 46.34
TraesCS2A01G043400.1 Wheat plasma membrane 47.9 46.34
TraesCS2A01G051800.1 Wheat plasma membrane 47.9 46.34
TraesCS2D01G042500.1 Wheat plasma membrane 47.9 46.34
TraesCS2D01G042600.1 Wheat plasma membrane 47.9 46.34
TraesCS7A01G159800.1 Wheat plasma membrane 47.9 46.34
TraesCS7B01G064400.1 Wheat plasma membrane 47.9 46.34
TraesCS7B01G064600.1 Wheat plasma membrane 47.9 46.34
TraesCSU01G013200.1 Wheat plasma membrane 47.9 46.34
TraesCSU01G162000.1 Wheat plasma membrane 47.9 46.34
TraesCSU01G181700.1 Wheat plasma membrane 47.9 46.34
TraesCSU01G191700.1 Wheat plasma membrane 47.9 46.34
TraesCS7B01G064300.1 Wheat plasma membrane 47.48 45.94
TraesCS7B01G064700.1 Wheat plasma membrane 47.48 45.94
EES01039 Sorghum plasma membrane 47.06 45.9
Zm00001d044421_P001 Maize plasma membrane 47.06 45.9
CDY16757 Canola extracellular, peroxisome, plasma membrane 46.22 45.83
CDY56741 Canola plasma membrane 46.22 45.83
GSMUA_Achr10P... Banana extracellular, golgi, plasma membrane 44.96 45.73
KRG93333 Soybean plasma membrane 47.06 45.53
HORVU7Hr1G117490.1 Barley plasma membrane 49.58 45.38
CDY30733 Canola extracellular, golgi, plasma membrane 45.38 45.0
CDY45751 Canola extracellular, golgi, plasma membrane 45.38 45.0
CDY05123 Canola plasma membrane 41.18 44.95
CDY49756 Canola plasma membrane 46.22 44.9
KRH20314 Soybean plasma membrane 46.22 44.9
KRG93335 Soybean plasma membrane 46.22 44.72
CDY04003 Canola plasma membrane 46.22 44.53
CDX90787 Canola plasma membrane 40.76 44.5
TraesCS7B01G410800.1 Wheat golgi, plasma membrane, vacuole 33.19 44.13
GSMUA_Achr6P09180_001 Banana plasma membrane 43.28 43.83
Os05t0588500-01 Rice golgi, plasma membrane, vacuole 43.28 43.46
CDY30734 Canola plasma membrane 43.7 43.33
Os01t0605700-01 Rice golgi, plasma membrane, plastid 46.22 43.31
Os01t0606000-00 Rice plasma membrane 46.64 42.86
TraesCS7D01G490600.1 Wheat plasma membrane 28.57 41.98
CDX86834 Canola plasma membrane 43.7 41.77
CDY40867 Canola plasma membrane 43.7 41.77
HORVU1Hr1G079940.2 Barley peroxisome, plasma membrane, plastid 50.0 41.46
PGSC0003DMT400001425 Potato golgi, plasma membrane 30.67 40.33
TraesCS7A01G503300.1 Wheat plasma membrane 42.86 40.32
TraesCS2D01G052100.1 Wheat plasma membrane 32.77 40.0
TraesCSU01G232400.1 Wheat plasma membrane 32.77 40.0
TraesCS2B01G055800.1 Wheat plasma membrane 48.32 39.93
Os09t0258700-00 Rice plasma membrane 36.97 39.64
TraesCS7B01G064500.1 Wheat plasma membrane 32.35 39.49
TraesCS3D01G227000.1 Wheat plasma membrane 33.61 39.41
Solyc11g028270.1.1 Tomato extracellular 29.41 39.11
TraesCS7A01G503200.1 Wheat plasma membrane 42.86 38.64
CDY04628 Canola extracellular, golgi 39.5 38.21
CDX75890 Canola plasma membrane 36.97 38.1
CDX82395 Canola plasma membrane 36.97 38.1
CDX86454 Canola plasma membrane, plastid 47.48 38.05
CDY50241 Canola extracellular, golgi, plasma membrane 39.08 37.8
CDY44448 Canola plasma membrane, plastid 47.48 37.42
CDY14399 Canola mitochondrion 34.03 36.65
CDY67972 Canola golgi, plasma membrane 38.24 36.26
CDY69440 Canola plasma membrane 32.35 35.98
CDY34967 Canola plasma membrane 34.87 35.93
TraesCSU01G249100.1 Wheat golgi, plasma membrane, vacuole 21.85 35.86
CDX96591 Canola golgi, plasma membrane 37.82 35.86
TraesCS2B01G056000.2 Wheat plasma membrane 41.18 35.77
CDY27020 Canola golgi, plasma membrane 38.66 35.52
TraesCSU01G249000.1 Wheat golgi, plasma membrane, vacuole 21.43 35.17
CDX96199 Canola golgi, plasma membrane 37.82 34.88
CDX90555 Canola golgi, plasma membrane, vacuole 34.87 34.58
CDY09729 Canola golgi, plasma membrane, vacuole 34.87 34.58
CDY61492 Canola golgi, plasma membrane 33.61 34.48
CDX84358 Canola plasma membrane 30.25 34.45
CDY24920 Canola extracellular, golgi, vacuole 22.27 34.19
Os12t0178500-00 Rice plasma membrane 29.83 33.97
CDX97600 Canola plasma membrane 32.77 33.05
CDX98492 Canola plasma membrane 31.93 32.2
CDY25828 Canola mitochondrion, plasma membrane 23.11 31.43
CDY20083 Canola plasma membrane 31.09 31.36
CDY32341 Canola plasma membrane 31.09 31.36
CDY45750 Canola cytosol, golgi, plasma membrane 37.82 31.14
CDX77928 Canola plasma membrane 36.55 30.53
CDX92666 Canola golgi, plasma membrane 34.45 30.04
CDY11047 Canola golgi, plasma membrane 34.45 30.04
CDX68492 Canola plasma membrane 35.71 29.72
CDX83046 Canola plasma membrane 35.71 29.72
CDY03395 Canola endoplasmic reticulum, golgi, plasma membrane 34.03 29.67
CDY34333 Canola golgi, plasma membrane 34.03 29.67
CDY05867 Canola plasma membrane 35.71 29.41
CDY08093 Canola plasma membrane 35.71 29.41
CDX87161 Canola endoplasmic reticulum 34.03 29.24
CDX80379 Canola plasma membrane 35.29 29.17
CDX88041 Canola plasma membrane 35.29 29.17
CDY24854 Canola golgi, plasma membrane 33.19 29.15
CDY16863 Canola endoplasmic reticulum, plasma membrane 33.61 28.88
CDX84877 Canola golgi, plasma membrane 32.35 28.31
CDY05819 Canola golgi, plasma membrane 34.03 27.55
CDX71659 Canola golgi, plasma membrane 34.03 27.46
CDX91144 Canola plasma membrane 34.03 27.27
CDX73521 Canola golgi, mitochondrion, plasma membrane, plastid 30.25 27.17
CDX78511 Canola plasma membrane 33.19 27.05
CDX85668 Canola endoplasmic reticulum, golgi, plasma membrane 33.61 26.94
CDY07676 Canola golgi, plasma membrane 29.83 26.69
CDX69663 Canola golgi, plasma membrane 33.19 26.51
CDY53626 Canola plasma membrane 32.35 26.46
CDY08964 Canola plastid 31.93 26.39
CDX97233 Canola golgi, plasma membrane 32.77 26.17
Os09t0254600-00 Rice plastid 27.73 25.58
Protein Annotations
EnsemblPlants:CDY44578EnsemblPlantsGene:GSBRNA2T00080498001Gene3D:1.20.1280.290GO:A0A078I645GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0008643GO:GO:0016020GO:GO:0016021
InterPro:SWEET_sugar_transprPANTHER:PTHR10791PANTHER:PTHR10791:SF42PFAM:PF03083ProteinID:CDY44578ProteinID:CDY44578.1
TMHMM:TMhelixUniParc:UPI0004EDACB3UniProt:A0A078I645MapMan:24.2.6.1::
Description
BnaA04g10120DBidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:A0A078I645]
Coordinates
chrLK032595:-:75662..77236
Molecular Weight (calculated)
26809.3 Da
IEP (calculated)
9.039
GRAVY (calculated)
0.640
Length
238 amino acids
Sequence
(BLAST)
001: MVDAKQVRFI VGIIGNVISF FLFFSPMPTF WRIFKNKSVE EFQPWPYVAT MMNCMLWVFY GLPVVHKDSI LVTTINAVGM GFEAFYISVF LIYCGGKKNF
101: RRNIGLYLVA EVIAVAGIVL ITLFAIQNEF AKQTFVGVIC DVFNIAMYGA PSLVIKKVIR TRSVEYMPFL LSFVSFVNAG IWTAYSLIYK LDLYVLISNG
201: LGTALCASQL IVYGLYRNAT PRDEDKTKPS EIEIPATA
Best Arabidopsis Sequence Match ( AT5G40260.1 )
(BLAST)
001: MVDAKQVRFI IGVIGNVISF GLFAAPAKTF WRIFKKKSVE EFSYVPYVAT VMNCMLWVFY GLPVVHKDSI LVSTINGVGL VIELFYVGVY LMYCGHKKNH
101: RRNILGFLAL EVILVVAIIL ITLFALKGDF VKQTFVGVIC DVFNIAMYGA PSLAIIKVVK TKSVEYMPFL LSLVCFVNAG IWTTYSLIFK IDYYVLASNG
201: IGTFLALSQL IVYFMYYKST PKEKTVKPSE VEISATERV
Arabidopsis Description
SWEET8Bidirectional sugar transporter SWEET8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFH5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.