CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, golgi, plastid

Predictor Summary:

plastid 3
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plasma membrane, plastid
Any Predictor:	golgi, mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra000116.1-P	Field mustard	golgi, plasma membrane	96.23	94.44
CDY07676	Canola	golgi, plasma membrane	92.83	92.48
AT2G39060.1	Thale cress	golgi, plasma membrane, vacuole	82.26	84.5
KRH46948	Soybean	extracellular, golgi	33.58	52.98
KRH70400	Soybean	plasma membrane	51.7	52.29
KRH16151	Soybean	endoplasmic reticulum, plasma membrane, vacuole	35.47	51.93
KRH01728	Soybean	plasma membrane	50.94	51.53
CDY69440	Canola	plasma membrane	38.49	47.66
CDY11047	Canola	golgi, plasma membrane	41.51	40.29
CDX92666	Canola	golgi, plasma membrane	41.51	40.29
CDY24854	Canola	golgi, plasma membrane	41.13	40.22
CDY34333	Canola	golgi, plasma membrane	41.13	39.93
CDY03395	Canola	endoplasmic reticulum, golgi, plasma membrane	41.13	39.93
CDY25828	Canola	mitochondrion, plasma membrane	25.28	38.29
CDX77928	Canola	plasma membrane	40.75	37.89
CDX84877	Canola	golgi, plasma membrane	38.87	37.87
CDX87161	Canola	endoplasmic reticulum	39.25	37.55
CDY16863	Canola	endoplasmic reticulum, plasma membrane	38.87	37.18
CDX68492	Canola	plasma membrane	40.0	37.06
CDX83046	Canola	plasma membrane	40.0	37.06
CDY08093	Canola	plasma membrane	40.0	36.68
CDY05867	Canola	plasma membrane	40.0	36.68
CDX80379	Canola	plasma membrane	39.62	36.46
CDX88041	Canola	plasma membrane	39.62	36.46
CDY08964	Canola	plastid	38.87	35.76
CDY05819	Canola	golgi, plasma membrane	39.62	35.71
CDX71659	Canola	golgi, plasma membrane	39.25	35.25
CDY05123	Canola	plasma membrane	28.68	34.86
CDX86834	Canola	plasma membrane	32.45	34.54
CDX90787	Canola	plasma membrane	28.3	34.4
CDX90555	Canola	golgi, plasma membrane, vacuole	30.94	34.17
CDY40867	Canola	plasma membrane	32.08	34.14
CDX69663	Canola	golgi, plasma membrane	38.11	33.89
CDY09729	Canola	golgi, plasma membrane, vacuole	30.57	33.75
CDY53626	Canola	plasma membrane	36.98	33.68
CDX97233	Canola	golgi, plasma membrane	37.74	33.56
CDX85668	Canola	endoplasmic reticulum, golgi, plasma membrane	36.98	33.0
CDX91144	Canola	plasma membrane	36.98	33.0
CDX78511	Canola	plasma membrane	36.23	32.88
CDY24920	Canola	extracellular, golgi, vacuole	18.87	32.26
CDY14399	Canola	mitochondrion	26.42	31.67
CDY56741	Canola	plasma membrane	28.68	31.67
CDX75890	Canola	plasma membrane	27.17	31.17
CDY16757	Canola	extracellular, peroxisome, plasma membrane	27.92	30.83
CDX82395	Canola	plasma membrane	26.79	30.74
CDY34967	Canola	plasma membrane	26.79	30.74
CDY49756	Canola	plasma membrane	28.3	30.61
CDY04003	Canola	plasma membrane	28.3	30.36
CDX96591	Canola	golgi, plasma membrane	28.68	30.28
CDY67972	Canola	golgi, plasma membrane	28.68	30.28
CDY44578	Canola	plasma membrane	27.17	30.25
CDY61492	Canola	golgi, plasma membrane	26.42	30.17
CDY04628	Canola	extracellular, golgi	27.92	30.08
CDY50241	Canola	extracellular, golgi, plasma membrane	27.92	30.08
CDX98492	Canola	plasma membrane	26.42	29.66
CDX97600	Canola	plasma membrane	26.42	29.66
CDY36831	Canola	plasma membrane	26.42	29.41
CDY27020	Canola	golgi, plasma membrane	28.68	29.34
CDY30733	Canola	extracellular, golgi, plasma membrane	26.04	28.75
CDX84358	Canola	plasma membrane	22.64	28.71
CDY20083	Canola	plasma membrane	25.28	28.39
CDY45751	Canola	extracellular, golgi, plasma membrane	25.66	28.33
CDX96199	Canola	golgi, plasma membrane	27.55	28.29
CDY32341	Canola	plasma membrane	24.91	27.97
CDY30734	Canola	plasma membrane	25.28	27.92
CDX86454	Canola	plasma membrane, plastid	28.68	25.59
CDY44448	Canola	plasma membrane, plastid	28.68	25.17
CDY45750	Canola	cytosol, golgi, plasma membrane	21.13	19.38

Protein Annotations

EnsemblPlants:CDX73521	EnsemblPlantsGene:GSBRNA2T00109043001	Gene3D:1.20.1280.290	GO:A0A078C908	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:SWEET_sugar_transpr	PANTHER:PTHR10791	PANTHER:PTHR10791:SF52	PFAM:PF03083	ProteinID:CDX73521
ProteinID:CDX73521.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EDF0EF	MapMan:24.2.6.1	:

Description

BnaC08g24820D

Coordinates

chrLK031799:-:937008..938718

Molecular Weight (calculated)

29687.1 Da

IEP (calculated)

9.358

GRAVY (calculated)

0.598

Length

265 amino acids

Sequence
(BLAST)

001: MFYISLTIRH GNIVSFGVFL SPVPTFYGIY KKKSSKGFQS IPYICALASA TLLLFYGIMK THAYLIISIN TFGCFIEISY LFLYIIYAPR EARIFTLKLI
101: LICNIGGLGL LILLVDLLIP KQHRVSTVGW VCAAYSLAVF ASPLSVMRKV IRTKSVEYMP LLLSLSLTLN AVMWFFYGLL IEDKFIAMPN ILGFLFGIAQ
201: MILYMMYHDS KKTDLPKLIS TENQPTNETN LNEVAIVAVE LSDARAENVE GSVRPMKTPN SSTTA

Best Arabidopsis Sequence Match ( AT2G39060.1 )
(BLAST)

001: MFLKVHEIAF LFGLLGNIVS FGVFLSPVPT FYGIYKKKSS KGFQSIPYIC ALASATLLLY YGIMKTHAYL IISINTFGCF IEISYLFLYI LYAPREAKIS
101: TLKLIVICNI GGLGLLILLV NLLVPKQHRV STVGWVCAAY SLAVFASPLS VMRKVIKTKS VEYMPFLLSL SLTLNAVMWF FYGLLIKDKF IAMPNILGFL
201: FGVAQMILYM MYQGSTKTDL PTENQLANKT DVNEVPIVAV ELPDVGSDNV EGSVRPMK

Arabidopsis Description

SWEET9Bidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:A0A178VR23]
SUBAcon: [plasma membrane,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.