CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97600	Canola	plasma membrane	97.88	97.88
Bra027314.1-P	Field mustard	plasma membrane	84.32	92.56
AT3G14770.1	Thale cress	plasma membrane	89.41	89.41
CDY20083	Canola	plasma membrane	86.86	86.86
CDY32341	Canola	plasma membrane	86.02	86.02
KRH13025	Soybean	golgi, plasma membrane, vacuole	68.22	67.36
VIT_19s0014g00280.t01	Wine grape	golgi, plasma membrane, plastid	66.53	66.81
KRH21866	Soybean	plasma membrane	65.68	65.96
KRH27431	Soybean	plasma membrane	65.68	65.96
PGSC0003DMT400018258	Potato	plasma membrane	54.66	63.55
Solyc07g062120.2.1	Tomato	plasma membrane, plastid	62.71	62.98
KRH13004	Soybean	plasma membrane	58.05	61.44
GSMUA_Achr1P25290_001	Banana	plasma membrane, plastid	60.17	59.17
KXG32677	Sorghum	golgi, plasma membrane, vacuole	58.47	56.79
Os01t0541800-01	Rice	plasma membrane	57.63	55.97
TraesCS6D01G138000.1	Wheat	plasma membrane	56.36	55.65
TraesCS6B01G176800.1	Wheat	plasma membrane	56.36	55.65
TraesCS6A01G148600.1	Wheat	plasma membrane	55.93	55.23
GSMUA_Achr1P12680_001	Banana	nucleus	57.63	49.28
HORVU6Hr1G029520.4	Barley	plastid	56.78	43.37
CDY05123	Canola	plasma membrane	34.75	37.61
CDY50241	Canola	extracellular, golgi, plasma membrane	38.98	37.4
CDY04628	Canola	extracellular, golgi	38.56	36.99
CDX90787	Canola	plasma membrane	33.9	36.7
CDX96591	Canola	golgi, plasma membrane	38.98	36.65
CDY67972	Canola	golgi, plasma membrane	38.98	36.65
CDY27020	Canola	golgi, plasma membrane	39.83	36.29
CDX96199	Canola	golgi, plasma membrane	39.41	36.05
CDX86834	Canola	plasma membrane	36.44	34.54
CDY40867	Canola	plasma membrane	36.44	34.54
CDY61492	Canola	golgi, plasma membrane	33.05	33.62
CDY14399	Canola	mitochondrion	31.36	33.48
CDY44578	Canola	plasma membrane	32.2	31.93
CDY16757	Canola	extracellular, peroxisome, plasma membrane	31.78	31.25
CDY04003	Canola	plasma membrane	32.63	31.17
CDX82395	Canola	plasma membrane	30.51	31.17
CDX75890	Canola	plasma membrane	30.51	31.17
CDY36831	Canola	plasma membrane	31.36	31.09
CDY49756	Canola	plasma membrane	32.2	31.02
CDY45751	Canola	extracellular, golgi, plasma membrane	31.36	30.83
CDY30733	Canola	extracellular, golgi, plasma membrane	31.36	30.83
CDY34967	Canola	plasma membrane	30.08	30.74
CDY56741	Canola	plasma membrane	30.93	30.42
CDY09729	Canola	golgi, plasma membrane, vacuole	30.93	30.42
CDX90555	Canola	golgi, plasma membrane, vacuole	30.93	30.42
CDY24854	Canola	golgi, plasma membrane	34.75	30.26
CDY69440	Canola	plasma membrane	27.12	29.91
CDY30734	Canola	plasma membrane	30.08	29.58
CDX92666	Canola	golgi, plasma membrane	33.9	29.3
CDY11047	Canola	golgi, plasma membrane	33.9	29.3
CDX87161	Canola	endoplasmic reticulum	34.32	29.24
CDY24920	Canola	extracellular, golgi, vacuole	19.07	29.03
CDY03395	Canola	endoplasmic reticulum, golgi, plasma membrane	33.47	28.94
CDY34333	Canola	golgi, plasma membrane	33.47	28.94
CDY16863	Canola	endoplasmic reticulum, plasma membrane	33.9	28.88
CDY25828	Canola	mitochondrion, plasma membrane	21.19	28.57
CDX71659	Canola	golgi, plasma membrane	35.59	28.47
CDY05819	Canola	golgi, plasma membrane	35.17	28.23
CDX80379	Canola	plasma membrane	33.9	27.78
CDX88041	Canola	plasma membrane	33.9	27.78
CDX83046	Canola	plasma membrane	33.47	27.62
CDX77928	Canola	plasma membrane	33.05	27.37
CDY05867	Canola	plasma membrane	33.47	27.34
CDY08093	Canola	plasma membrane	33.47	27.34
CDX68492	Canola	plasma membrane	33.05	27.27
CDX91144	Canola	plasma membrane	33.47	26.6
CDX85668	Canola	endoplasmic reticulum, golgi, plasma membrane	33.47	26.6
CDX69663	Canola	golgi, plasma membrane	33.47	26.51
CDY53626	Canola	plasma membrane	32.63	26.46
CDX73521	Canola	golgi, mitochondrion, plasma membrane, plastid	29.66	26.42
CDY08964	Canola	plastid	32.2	26.39
CDX97233	Canola	golgi, plasma membrane	33.05	26.17
CDX86454	Canola	plasma membrane, plastid	32.63	25.93
CDX78511	Canola	plasma membrane	31.78	25.68
CDY44448	Canola	plasma membrane, plastid	32.63	25.5
CDY07676	Canola	golgi, plasma membrane	27.54	24.44
CDX84877	Canola	golgi, plasma membrane	27.97	24.26
CDX84358	Canola	plasma membrane	21.19	23.92
CDY45750	Canola	cytosol, golgi, plasma membrane	26.27	21.45

Protein Annotations

EnsemblPlants:CDX98492	EnsemblPlantsGene:GSBRNA2T00106124001	Gene3D:1.20.1280.290	GO:A0A078EBU4	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:SWEET_sugar_transpr	PANTHER:PTHR10791	PANTHER:PTHR10791:SF57	PFAM:PF03083	ProteinID:CDX98492
ProteinID:CDX98492.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE4573	MapMan:24.2.6.1	:

Description

BnaC05g38830D

Coordinates

chrLK031905:-:542562..544545

Molecular Weight (calculated)

26709.2 Da

IEP (calculated)

9.100

GRAVY (calculated)

0.708

Length

236 amino acids

Sequence
(BLAST)

001: MDVFAFHGSF SRWKDVAGIA GNIFAFGLFI SPMPTFRRIL RNKSTEQFSG LPYIYSLLNC LICLWYGSPF ISQRNLMLVT VNSLGATFQL CYIILFIMHT
101: DKKNKMRMLV LLLVVFAVVG LIVAGSLQIP DKLTRWYFVG FLSCASLVSM FASPLFVINL VIRTKSVEFM PFYLSLSTFL LSGSFLLYGL FNSDAFVYTP
201: NGIGTVLGIV QLSLYCYYHR SSIEEETKEP LIVSYV

Best Arabidopsis Sequence Match ( AT3G14770.1 )
(BLAST)

001: MDVFAFNASL SMCKDVAGIA GNIFAFGLFV SPMPTFRRIM RNKSTEQFSG LPYIYALLNC LICLWYGTPF ISHSNAMLMT VNSVGATFQL CYIILFIMHT
101: DKKNKMKMLG LLFVVFAVVG VIVAGSLQIP DQLTRWYFVG FLSCGSLVSM FASPLFVINL VIRTKSVEFM PFYLSLSTFL MSASFLLYGL FNSDAFVYTP
201: NGIGTILGIV QLALYCYYHR NSIEEETKEP LIVSYV

Arabidopsis Description

SWEET2Bidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:A0A178VM79]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.