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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 2
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 5
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX68492 plasma membrane
CDX70995
CDX77928 plasma membrane
CDX83046 plasma membrane
CDX88803
CDX92368
CDY05867 plasma membrane
CDY08093 plasma membrane
CDY09128
CDY35676

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48740.1 CDX68492 AT3G48740.1 24027245
AT3G48740.1 CDX77928 AT3G48740.1 24027245
AT3G48740.1 CDX83046 AT3G48740.1 24027245
AT3G48740.1 CDY05867 AT3G48740.1 24027245
AT3G48740.1 CDY08093 AT3G48740.1 24027245
AT3G48740.1 CDX70995 AT5G22290.1 21798944
AT3G48740.1 CDX88803 AT5G22290.1 21798944
AT3G48740.1 CDX92368 AT5G22290.1 21798944
AT3G48740.1 CDY09128 AT5G22290.1 21798944
AT3G48740.1 CDY35676 AT5G22290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX83046 Canola plasma membrane 98.6 98.6
CDX77928 Canola plasma membrane 94.06 94.39
Bra029914.1-P Field mustard plasma membrane 95.45 94.14
CDY05867 Canola plasma membrane 94.06 93.08
CDY08093 Canola plasma membrane 94.06 93.08
AT3G48740.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 90.21 89.27
CDX80379 Canola plasma membrane 84.62 84.03
CDX88041 Canola plasma membrane 84.27 83.68
CDX87161 Canola endoplasmic reticulum 80.42 83.03
CDY16863 Canola endoplasmic reticulum, plasma membrane 80.42 83.03
TraesCS6B01G421600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 41.61 62.3
CDY24854 Canola golgi, plasma membrane 53.5 56.46
CDY03395 Canola endoplasmic reticulum, golgi, plasma membrane 53.5 56.04
CDY34333 Canola golgi, plasma membrane 53.5 56.04
CDX92666 Canola golgi, plasma membrane 52.8 55.31
CDY11047 Canola golgi, plasma membrane 52.8 55.31
CDY69440 Canola plasma membrane 40.91 54.67
CDY05819 Canola golgi, plasma membrane 55.94 54.42
CDX71659 Canola golgi, plasma membrane 55.59 53.9
PGSC0003DMT400082699 Potato extracellular, plasma membrane 24.48 53.85
TraesCS6D01G009700.1 Wheat plasma membrane 51.4 51.22
CDY08964 Canola plastid 51.4 51.04
TraesCS6A01G009000.1 Wheat plasma membrane 51.05 50.87
TraesCS6B01G015300.1 Wheat golgi, plasma membrane, vacuole 51.05 50.87
Solyc03g097620.1.1 Tomato plasma membrane 48.95 50.72
HORVU1Hr1G010210.2 Barley plasma membrane 51.05 50.0
TraesCS6A01G009100.1 Wheat plasma membrane 50.7 49.83
TraesCS1B01G066900.1 Wheat plasma membrane 50.0 49.31
TraesCS1D01G052700.1 Wheat plasma membrane 50.7 48.99
TraesCS6D01G012100.1 Wheat plasma membrane 50.35 48.98
GSMUA_Achr3P18700_001 Banana golgi, plasma membrane, plastid 47.9 48.75
TraesCS6B01G015200.1 Wheat plasma membrane 50.0 48.64
TraesCS1A01G050400.1 Wheat plasma membrane 49.65 48.46
TraesCS6B01G015100.1 Wheat plasma membrane 49.65 48.3
TraesCS6D01G009600.1 Wheat plasma membrane 49.3 48.12
HORVU6Hr1G089540.2 Barley golgi, plasma membrane 48.6 48.1
TraesCS6D01G367300.1 Wheat golgi, plasma membrane, vacuole 47.9 48.07
CDY25828 Canola mitochondrion, plasma membrane 29.37 48.0
GSMUA_Achr6P23850_001 Banana golgi, plasma membrane 46.15 48.0
HORVU6Hr1G000440.3 Barley golgi, plasma membrane 49.3 47.96
TraesCS6B01G421800.1 Wheat plasma membrane 48.6 47.93
TraesCS6D01G367200.1 Wheat plasma membrane 48.25 47.92
KXG28442 Sorghum golgi, plasma membrane 48.25 47.75
Os11t0508600-01 Rice golgi, plasma membrane 50.35 47.52
TraesCSU01G206000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 49.65 47.49
TraesCS6B01G421500.1 Wheat plasma membrane 48.6 47.28
TraesCS6A01G382600.1 Wheat plasma membrane 47.9 47.24
TraesCS6D01G009500.1 Wheat endoplasmic reticulum, golgi, plasma membrane 49.3 47.16
TraesCS6A01G382400.1 Wheat plasma membrane 48.6 47.12
TraesCS6B01G421700.1 Wheat plasma membrane 46.85 47.02
Os12t0476200-01 Rice extracellular, golgi 48.6 46.96
TraesCS6D01G367400.1 Wheat plasma membrane 47.55 46.9
Zm00001d041067_P001 Maize plasma membrane 48.25 46.78
Zm00001d049252_P001 Maize plasma membrane 47.9 46.76
Zm00001d023673_P001 Maize plasma membrane 48.6 46.18
EES15957 Sorghum golgi, plasma membrane 48.6 46.03
EES17001 Sorghum golgi, plasma membrane 48.6 45.72
Zm00001d023677_P001 Maize plasma membrane 48.25 45.7
GSMUA_Achr8P09230_001 Banana golgi, plasma membrane 44.76 45.55
CDX84877 Canola golgi, plasma membrane 43.01 45.22
GSMUA_Achr6P07950_001 Banana golgi, plasma membrane 45.45 45.14
CDY53626 Canola plasma membrane 44.76 43.99
OQU79094 Sorghum plasma membrane 47.9 43.63
GSMUA_AchrUn_... Banana golgi, plasma membrane 43.01 43.62
KRH54137 Soybean plasma membrane 46.85 43.37
CDX91144 Canola plasma membrane 44.76 43.1
KRH41096 Soybean golgi, plasma membrane 44.06 42.86
CDX85668 Canola endoplasmic reticulum, golgi, plasma membrane 44.41 42.76
Os02t0513100-01 Rice golgi, plasma membrane, plastid 47.55 42.63
CDX69663 Canola golgi, plasma membrane 44.41 42.62
CDX78511 Canola plasma membrane 43.36 42.47
CDX97233 Canola golgi, plasma membrane 44.06 42.28
TraesCS7B01G050500.1 Wheat plasma membrane 45.45 42.21
TraesCS7A01G147300.1 Wheat plasma membrane 45.45 41.94
TraesCS7D01G149000.1 Wheat plasma membrane 45.45 41.94
HORVU7Hr1G030160.1 Barley plasma membrane 45.8 41.85
Zm00001d050577_P001 Maize plasma membrane 43.71 41.12
OQU89754 Sorghum plastid 39.16 41.03
Zm00001d021064_P001 Maize plasma membrane 40.56 40.14
TraesCS5A01G289200.1 Wheat plasma membrane 40.21 40.07
TraesCS5B01G288600.1 Wheat plasma membrane 40.21 40.07
TraesCS5D01G297100.1 Wheat plasma membrane 40.21 40.07
CDX73521 Canola golgi, mitochondrion, plasma membrane, plastid 37.06 40.0
GSMUA_Achr10P... Banana plasma membrane 46.5 39.82
EES06868 Sorghum golgi, plasma membrane, plastid 46.5 39.58
Zm00001d007365_P001 Maize endoplasmic reticulum 47.55 39.53
HORVU6Hr1G089600.1 Barley golgi, mitochondrion, peroxisome 47.9 38.92
CDY07676 Canola golgi, plasma membrane 36.01 38.72
Os09t0508250-00 Rice extracellular, golgi 23.43 38.29
CDY04628 Canola extracellular, golgi 32.52 37.8
CDY50241 Canola extracellular, golgi, plasma membrane 32.52 37.8
KRH59783 Soybean golgi, plasma membrane 31.12 37.71
HORVU5Hr1G076770.1 Barley golgi, plasma membrane 41.61 37.07
Zm00001d016590_P001 Maize plasma membrane 41.96 37.04
GSMUA_Achr8P00620_001 Banana plasma membrane, vacuole 45.1 36.75
Os08t0535200-01 Rice golgi, plasma membrane, plastid 39.16 36.48
TraesCS6A01G382500.1 Wheat plasma membrane 38.81 36.16
CDY36831 Canola plasma membrane 30.07 36.13
CDX75890 Canola plasma membrane 29.02 35.93
CDY44578 Canola plasma membrane 29.72 35.71
EES14183 Sorghum plastid 38.46 35.6
CDX96591 Canola golgi, plasma membrane 31.12 35.46
Zm00001d031647_P001 Maize plasma membrane 38.11 35.16
CDX82395 Canola plasma membrane 28.32 35.06
CDY67972 Canola golgi, plasma membrane 30.77 35.06
TraesCS7A01G261100.1 Wheat plasma membrane 37.06 34.98
TraesCS7D01G263100.1 Wheat plasma membrane 37.41 34.97
TraesCS7B01G160000.1 Wheat plasma membrane 37.06 34.64
CDY05123 Canola plasma membrane 26.22 34.4
HORVU7Hr1G054710.1 Barley plasma membrane 36.01 33.99
GSMUA_AchrUn_... Banana plasma membrane 30.07 33.99
CDX90787 Canola plasma membrane 25.87 33.95
GSMUA_Achr11P... Banana plasma membrane, vacuole 39.51 33.93
CDY34967 Canola plasma membrane 27.27 33.77
CDX90555 Canola golgi, plasma membrane, vacuole 28.32 33.75
CDX98492 Canola plasma membrane 27.27 33.05
CDX86834 Canola plasma membrane 28.67 32.93
CDY09729 Canola golgi, plasma membrane, vacuole 27.62 32.92
CDY24920 Canola extracellular, golgi, vacuole 17.83 32.9
CDY49756 Canola plasma membrane 27.97 32.65
CDX97600 Canola plasma membrane 26.92 32.63
CDY40867 Canola plasma membrane 28.32 32.53
CDY16757 Canola extracellular, peroxisome, plasma membrane 27.27 32.5
CDY56741 Canola plasma membrane 27.27 32.5
CDY04003 Canola plasma membrane 27.97 32.39
CDY20083 Canola plasma membrane 26.22 31.78
CDY32341 Canola plasma membrane 26.22 31.78
CDY61492 Canola golgi, plasma membrane 25.17 31.03
CDY14399 Canola mitochondrion 23.08 29.86
CDY27020 Canola golgi, plasma membrane 26.92 29.73
CDX96199 Canola golgi, plasma membrane 26.57 29.46
CDY30733 Canola extracellular, golgi, plasma membrane 24.13 28.75
CDY30734 Canola plasma membrane 24.13 28.75
CDY45751 Canola extracellular, golgi, plasma membrane 24.13 28.75
CDX86454 Canola plasma membrane, plastid 29.02 27.95
CDY44448 Canola plasma membrane, plastid 29.02 27.48
CDX84358 Canola plasma membrane 19.93 27.27
CDY45750 Canola cytosol, golgi, plasma membrane 21.33 21.11
Protein Annotations
EnsemblPlants:CDX68492EnsemblPlantsGene:GSBRNA2T00126005001Gene3D:1.20.1280.290GO:A0A078BWB5GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:SWEET_sugar_transprPANTHER:PTHR10791PANTHER:PTHR10791:SF65PFAM:PF03083ProteinID:CDX68492
ProteinID:CDX68492.1TMHMM:TMhelixUniParc:UPI0004EB3A6EMapMan:24.2.6.1::
Description
BnaC01g25700D
Coordinates
chrLK031788:-:2793116..2795474
Molecular Weight (calculated)
31712.5 Da
IEP (calculated)
9.330
GRAVY (calculated)
0.542
Length
286 amino acids
Sequence
(BLAST)
001: MPLFDTHNTW AFVFGLMGNV ISFAVFLSPV PTFYRVWKKK TTEGFQSLPY VVALFSATLW LYYATQKKDV FLLVTINSFG CFIETIYISI FLAFAPKKAR
101: MLTVKLLLLM NFGGFCLILL LCQFLAKGIT RAKIIGGICV GFSVCVFAAP LSIIRTVIKT RSVEYMPFSL SLTLTISAVV WLLYGLALKD MYVAFPNVLG
201: FALGALQMIL YVVYRYCKTP PQLGEKEVEA AKLPEVSLDM LKLGTVSSPE PIAVVRQTNK CTCGNDQRSE TEDGQNGKQS SSATPT
Best Arabidopsis Sequence Match ( AT3G48740.1 )
(BLAST)
001: MSLFNTENTW AFVFGLLGNL ISFAVFLSPV PTFYRIWKKK TTEGFQSIPY VVALFSATLW LYYATQKKDV FLLVTINAFG CFIETIYISM FLAYAPKPAR
101: MLTVKMLLLM NFGGFCAILL LCQFLVKGAT RAKIIGGICV GFSVCVFAAP LSIIRTVIKT RSVEYMPFSL SLTLTISAVI WLLYGLALKD IYVAFPNVLG
201: FALGALQMIL YVVYKYCKTS PHLGEKEVEA AKLPEVSLDM LKLGTVSSPE PISVVRQANK CTCGNDRRAE IEDGQTPKHG KQSSSAAAT
Arabidopsis Description
SWEET11Bidirectional sugar transporter SWEET11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMM5]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.