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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 2
  • extracellular 3
  • golgi 3
  • plasma membrane 6
  • endoplasmic reticulum 3
  • vacuole 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra002403.1-P
Bra006619.1-P
Bra018039.1-P plasma membrane
Bra019560.1-P plasma membrane
Bra020182.1-P
Bra029914.1-P plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48740.1 Bra018039.1-P AT3G48740.1 24027245
AT3G48740.1 Bra019560.1-P AT3G48740.1 24027245
AT3G48740.1 Bra029914.1-P AT3G48740.1 24027245
AT3G48740.1 Bra002403.1-P AT5G22290.1 21798944
AT3G48740.1 Bra006619.1-P AT5G22290.1 21798944
AT3G48740.1 Bra020182.1-P AT5G22290.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX68492 Canola plasma membrane 94.14 95.45
CDX83046 Canola plasma membrane 94.14 95.45
Bra019560.1-P Field mustard plasma membrane 91.03 92.63
Bra018039.1-P Field mustard plasma membrane 90.0 90.31
AT3G48740.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 86.55 86.85
Bra026487.1-P Field mustard endoplasmic reticulum, plasma membrane 80.34 84.12
Bra009700.1-P Field mustard plasma membrane 81.38 81.94
TraesCS6B01G421600.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 41.03 62.3
Bra010477.1-P Field mustard golgi, plasma membrane 53.1 56.62
Bra013854.1-P Field mustard golgi, plasma membrane 52.76 56.04
Bra040489.1-P Field mustard golgi, plasma membrane 54.83 54.08
PGSC0003DMT400082699 Potato extracellular, plasma membrane 24.14 53.85
Bra019197.1-P Field mustard plasma membrane 43.1 52.52
TraesCS6D01G009700.1 Wheat plasma membrane 50.69 51.22
TraesCS6A01G009000.1 Wheat plasma membrane 50.34 50.87
TraesCS6B01G015300.1 Wheat golgi, plasma membrane, vacuole 50.34 50.87
Solyc03g097620.1.1 Tomato plasma membrane 47.93 50.36
HORVU1Hr1G010210.2 Barley plasma membrane 50.34 50.0
TraesCS6A01G009100.1 Wheat plasma membrane 49.66 49.48
TraesCS1B01G066900.1 Wheat plasma membrane 49.31 49.31
TraesCS1D01G052700.1 Wheat plasma membrane 50.0 48.99
GSMUA_Achr3P18700_001 Banana golgi, plasma membrane, plastid 47.24 48.75
TraesCS6D01G012100.1 Wheat plasma membrane 49.31 48.64
Bra012412.1-P Field mustard plasma membrane 29.31 48.57
TraesCS1A01G050400.1 Wheat plasma membrane 48.97 48.46
TraesCS6B01G015100.1 Wheat plasma membrane 48.97 48.3
TraesCS6B01G015200.1 Wheat plasma membrane 48.97 48.3
TraesCS6D01G009600.1 Wheat plasma membrane 48.62 48.12
HORVU6Hr1G089540.2 Barley golgi, plasma membrane 47.93 48.1
TraesCS6D01G367300.1 Wheat golgi, plasma membrane, vacuole 47.24 48.07
GSMUA_Achr6P23850_001 Banana golgi, plasma membrane 45.52 48.0
HORVU6Hr1G000440.3 Barley golgi, plasma membrane 48.62 47.96
TraesCS6B01G421800.1 Wheat plasma membrane 47.93 47.93
TraesCS6D01G367200.1 Wheat plasma membrane 47.59 47.92
KXG28442 Sorghum golgi, plasma membrane 47.59 47.75
Os11t0508600-01 Rice golgi, plasma membrane 49.66 47.52
TraesCSU01G206000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 48.97 47.49
TraesCS6B01G421500.1 Wheat plasma membrane 47.93 47.28
TraesCS6A01G382600.1 Wheat plasma membrane 47.24 47.24
TraesCS6D01G009500.1 Wheat endoplasmic reticulum, golgi, plasma membrane 48.62 47.16
TraesCS6A01G382400.1 Wheat plasma membrane 47.93 47.12
TraesCS6B01G421700.1 Wheat plasma membrane 46.21 47.02
Os12t0476200-01 Rice extracellular, golgi 47.93 46.96
TraesCS6D01G367400.1 Wheat plasma membrane 46.9 46.9
Zm00001d041067_P001 Maize plasma membrane 47.59 46.78
Zm00001d049252_P001 Maize plasma membrane 47.24 46.76
Zm00001d023673_P001 Maize plasma membrane 47.93 46.18
EES15957 Sorghum golgi, plasma membrane 47.93 46.03
GSMUA_Achr8P09230_001 Banana golgi, plasma membrane 44.48 45.91
EES17001 Sorghum golgi, plasma membrane 47.93 45.72
Zm00001d023677_P001 Maize plasma membrane 47.59 45.7
GSMUA_Achr6P07950_001 Banana golgi, plasma membrane 44.48 44.79
KRH54137 Soybean plasma membrane 46.9 44.01
OQU79094 Sorghum plasma membrane 47.24 43.63
GSMUA_AchrUn_... Banana golgi, plasma membrane 42.41 43.62
KRH41096 Soybean golgi, plasma membrane 44.14 43.54
TraesCS7B01G050500.1 Wheat plasma membrane 45.86 43.18
Bra023394.1-P Field mustard plasma membrane 44.14 43.1
Os02t0513100-01 Rice golgi, plasma membrane, plastid 47.24 42.95
HORVU7Hr1G030160.1 Barley plasma membrane 46.21 42.81
TraesCS7A01G147300.1 Wheat plasma membrane 45.52 42.58
TraesCS7D01G149000.1 Wheat plasma membrane 45.52 42.58
Bra022761.1-P Field mustard golgi, plasma membrane 42.41 42.56
Zm00001d050577_P001 Maize plasma membrane 43.1 41.12
Bra000116.1-P Field mustard golgi, plasma membrane 38.28 41.11
OQU89754 Sorghum plastid 38.62 41.03
TraesCS5A01G289200.1 Wheat plasma membrane 40.0 40.42
TraesCS5B01G288600.1 Wheat plasma membrane 40.0 40.42
TraesCS5D01G297100.1 Wheat plasma membrane 40.0 40.42
Zm00001d021064_P001 Maize plasma membrane 40.0 40.14
EES06868 Sorghum golgi, plasma membrane, plastid 46.21 39.88
GSMUA_Achr10P... Banana plasma membrane 45.86 39.82
Zm00001d007365_P001 Maize endoplasmic reticulum 46.9 39.53
HORVU6Hr1G089600.1 Barley golgi, mitochondrion, peroxisome 47.24 38.92
Os09t0508250-00 Rice extracellular, golgi 23.45 38.86
KRH59783 Soybean golgi, plasma membrane 31.38 38.56
Bra017916.1-P Field mustard extracellular, golgi 32.07 37.8
HORVU5Hr1G076770.1 Barley golgi, plasma membrane 41.38 37.38
Zm00001d016590_P001 Maize plasma membrane 41.72 37.35
GSMUA_Achr8P00620_001 Banana plasma membrane, vacuole 45.17 37.32
Os08t0535200-01 Rice golgi, plasma membrane, plastid 38.28 36.16
TraesCS6A01G382500.1 Wheat plasma membrane 38.28 36.16
Bra006185.1-P Field mustard golgi, plasma membrane, plastid 39.31 36.08
Bra025595.1-P Field mustard plasma membrane 29.31 35.71
Bra016421.1-P Field mustard golgi, plasma membrane 30.69 35.46
EES14183 Sorghum plastid 37.59 35.28
Bra001638.1-P Field mustard plasma membrane 27.93 35.06
TraesCS7A01G261100.1 Wheat plasma membrane 36.55 34.98
TraesCS7D01G263100.1 Wheat plasma membrane 36.9 34.97
Bra008850.1-P Field mustard plasma membrane 25.17 34.93
Zm00001d031647_P001 Maize plasma membrane 37.24 34.84
TraesCS7B01G160000.1 Wheat plasma membrane 36.55 34.64
GSMUA_AchrUn_... Banana plasma membrane 30.0 34.39
GSMUA_Achr11P... Banana plasma membrane, vacuole 39.31 34.23
Bra012752.1-P Field mustard extracellular, golgi, vacuole 28.28 34.17
HORVU7Hr1G054710.1 Barley plasma membrane 35.52 33.99
Bra021190.1-P Field mustard plasma membrane 26.9 33.77
Bra025317.1-P Field mustard plasma membrane 28.62 33.47
Bra035270.1-P Field mustard plasma membrane 28.28 32.93
Bra033034.1-P Field mustard plasma membrane 27.59 32.65
Bra035879.1-P Field mustard extracellular, golgi, plasma membrane 26.9 32.5
Bra021577.1-P Field mustard plasma membrane 25.86 31.78
Bra027314.1-P Field mustard plasma membrane 23.45 31.63
Bra000725.1-P Field mustard plasma membrane 18.62 30.34
Bra022636.1-P Field mustard golgi, plasma membrane 26.21 29.34
Bra029244.1-P Field mustard plasma membrane 23.79 28.75
Bra029245.1-P Field mustard extracellular, golgi, plasma membrane 23.79 28.75
Bra038060.1-P Field mustard extracellular, golgi, plasma membrane 23.45 27.87
Bra003075.1-P Field mustard golgi, plasma membrane, plastid 17.59 26.56
Bra008206.1-P Field mustard nucleus 1.03 5.45
Protein Annotations
Gene3D:1.20.1280.290MapMan:24.2.6.1EnsemblPlantsGene:Bra029914EnsemblPlants:Bra029914.1EnsemblPlants:Bra029914.1-PGO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0008643GO:GO:0016020
GO:GO:0016021UniProt:M4EM94PFAM:PF03083PANTHER:PTHR10791PANTHER:PTHR10791:SF65InterPro:SWEET_sugar_transpr
TMHMM:TMhelixUniParc:UPI0002543F55::::
Description
AT3G48740 (E=1e-143) | nodulin MtN3 family protein
Coordinates
chrA01:-:14839632..14842409
Molecular Weight (calculated)
32345.3 Da
IEP (calculated)
9.020
GRAVY (calculated)
0.550
Length
290 amino acids
Sequence
(BLAST)
001: MPLFDTHNTW AFVFGLMGNV ISFAVFLSPV PTFYRVWKKK TTEGFQSLPY VVALFSATLW LYYATQKKDV FLLVTINSFG CFIETIYISI FLAFAPKKAR
101: MLTVKLLLLM NFGGFCLILL LCQFLAKGTT RAKIIGGICV GFSVCVFAAP LSIIRTVIKT RSVEYMPFSL SLTLTISAVV WLLYGLALKD IYVAFPNVLG
201: FALGALQMIL YVVYRYCKTP PQLGEKEVEA AKLPEVSLDM LKLGTVSSPE PIAVVRQTNK CTCGNDQRSE AELMDKTASS PLPQHLHEHE
Best Arabidopsis Sequence Match ( AT3G48740.1 )
(BLAST)
001: MSLFNTENTW AFVFGLLGNL ISFAVFLSPV PTFYRIWKKK TTEGFQSIPY VVALFSATLW LYYATQKKDV FLLVTINAFG CFIETIYISM FLAYAPKPAR
101: MLTVKMLLLM NFGGFCAILL LCQFLVKGAT RAKIIGGICV GFSVCVFAAP LSIIRTVIKT RSVEYMPFSL SLTLTISAVI WLLYGLALKD IYVAFPNVLG
201: FALGALQMIL YVVYKYCKTS PHLGEKEVEA AKLPEVSLDM LKLGTVSSPE PISVVRQANK CTCGNDRRAE IEDGQTPKHG KQSSSAAAT
Arabidopsis Description
SWEET11Bidirectional sugar transporter SWEET11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMM5]
SUBAcon: [plasma membrane,endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.