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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 4
  • golgi 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, plastid
Any Predictor:plastid, secretory
BaCelLo:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY61492 Canola golgi, plasma membrane 96.88 80.17
CDY14399 Canola mitochondrion 81.25 70.59
Bra022636.1-P Field mustard golgi, plasma membrane 78.12 57.92
AT5G53190.1 Thale cress plasma membrane 77.6 56.65
KRH64501 Soybean golgi, plasma membrane 40.1 44.25
VIT_16s0050g02540.t01 Wine grape plasma membrane 56.25 43.37
Solyc03g007360.2.1 Tomato golgi, plasma membrane 53.12 39.69
KRH53444 Soybean golgi, plasma membrane 50.52 38.19
KRH18150 Soybean endoplasmic reticulum, plasma membrane, plastid 47.92 36.08
KRH16514 Soybean plasma membrane 47.4 35.83
KRH16511 Soybean golgi, plasma membrane 45.83 33.85
Bra000725.1-P Field mustard plasma membrane 30.21 32.58
TraesCS1A01G129600.1 Wheat plasma membrane 41.15 32.11
TraesCS1B01G147200.1 Wheat plasma membrane 41.15 32.11
TraesCS1D01G125900.2 Wheat plasma membrane 41.15 32.11
EES00047 Sorghum plasma membrane 43.23 32.05
PGSC0003DMT400023436 Potato golgi, plasma membrane 26.04 31.85
HORVU1Hr1G029920.4 Barley plasma membrane 40.62 31.45
Os05t0214300-00 Rice golgi, plasma membrane 40.62 30.0
KXG21564 Sorghum plasma membrane 36.46 28.46
Bra017916.1-P Field mustard extracellular, golgi 35.94 28.05
Zm00001d010440_P001 Maize extracellular, golgi, plasma membrane 34.38 27.73
Bra021577.1-P Field mustard plasma membrane 32.81 26.69
Bra016421.1-P Field mustard golgi, plasma membrane 34.38 26.29
Zm00001d039347_P001 Maize endoplasmic reticulum, golgi, mitochondrion, plasma membrane 35.94 26.04
Bra035270.1-P Field mustard plasma membrane 31.77 24.5
Bra025595.1-P Field mustard plasma membrane 29.69 23.95
Bra021190.1-P Field mustard plasma membrane 27.08 22.51
Bra001638.1-P Field mustard plasma membrane 27.08 22.51
Bra012752.1-P Field mustard extracellular, golgi, vacuole 28.12 22.5
Bra025317.1-P Field mustard plasma membrane 28.65 22.18
Bra033034.1-P Field mustard plasma membrane 28.12 22.04
Bra029245.1-P Field mustard extracellular, golgi, plasma membrane 27.08 21.67
Bra027314.1-P Field mustard plasma membrane 23.96 21.4
Bra035879.1-P Field mustard extracellular, golgi, plasma membrane 26.56 21.25
Bra029244.1-P Field mustard plasma membrane 25.52 20.42
Bra010477.1-P Field mustard golgi, plasma membrane 27.08 19.12
Bra023394.1-P Field mustard plasma membrane 29.17 18.86
Bra013854.1-P Field mustard golgi, plasma membrane 26.04 18.32
Bra019560.1-P Field mustard plasma membrane 27.08 18.25
Bra038060.1-P Field mustard extracellular, golgi, plasma membrane 22.92 18.03
Bra018039.1-P Field mustard plasma membrane 27.08 17.99
Bra000116.1-P Field mustard golgi, plasma membrane 25.0 17.78
Bra026487.1-P Field mustard endoplasmic reticulum, plasma membrane 25.52 17.69
Bra029914.1-P Field mustard plasma membrane 26.56 17.59
Bra040489.1-P Field mustard golgi, plasma membrane 26.04 17.01
Bra022761.1-P Field mustard golgi, plasma membrane 24.48 16.26
Bra009700.1-P Field mustard plasma membrane 23.96 15.97
Bra006185.1-P Field mustard golgi, plasma membrane, plastid 24.48 14.87
Bra012412.1-P Field mustard plasma membrane 13.54 14.86
Bra019197.1-P Field mustard plasma membrane 18.23 14.71
Bra008850.1-P Field mustard plasma membrane 12.5 11.48
Bra008206.1-P Field mustard nucleus 1.04 3.64
Protein Annotations
EnsemblPlants:Bra003075.1EnsemblPlants:Bra003075.1-PEnsemblPlantsGene:Bra003075Gene3D:1.20.1280.290GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0008643GO:GO:0016020GO:GO:0016021InterPro:SWEET_sugar_transprPANTHER:PTHR10791
PANTHER:PTHR10791:SF28PFAM:PF03083SEG:segTMHMM:TMhelixUniParc:UPI0002543AEAUniProt:M4CFU3
MapMan:24.2.6.1:::::
Description
AT5G53190 (E=5e-040) | nodulin MtN3 family protein
Coordinates
chrA10:-:5398936..5400586
Molecular Weight (calculated)
21594.5 Da
IEP (calculated)
7.894
GRAVY (calculated)
0.235
Length
192 amino acids
Sequence
(BLAST)
001: MHELSIGNGA SLLLYTAPVV FKKKSTEEFS CLPYVMTLFN CLIYTWYGLP IVSHCWENFP LVSINGVGIV LESIFIFVYF CYASPKEKAI SAVVFEDHRH
101: RKSFVGSVGL VASISMYGSP LIVMLPNMVG TPLGILQLII YFKYKNKKEA PITTTVVGKW DHEKNKSKLK LVVDIDHDAD ADDNEKKFMN AC
Best Arabidopsis Sequence Match ( AT5G53190.1 )
(BLAST)
001: MGDKLRLSIG ILGNGASLLL YTAPIVTFSR VFKKKSTEEF SCFPYVMTLF NCLIYTWYGL PIVSHLWENL PLVTINGVGI LLESIFIFIY FYYASPKEKI
101: KVGVTFVPVI VGFGLTTAIS ALVFDDHRHR KSFVGSVGLV ASISMYGSPL VVMKKVIETR SVEYMPFYLS FFSFLASSLW LAYGLLSHDL FLASPNMVAT
201: PLGILQLILY FKYKNKKDLA PTTMVITKRN DHDDKNKATL EFVVDVDRNS DTNEKNSNNA SSI
Arabidopsis Description
SWEET3Bidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:A0A178U9N2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.