Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 3
- golgi 4
- extracellular 3
- vacuole 2
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96199 | Canola | golgi, plasma membrane | 82.89 | 84.5 |
| CDY27020 | Canola | golgi, plasma membrane | 81.37 | 82.63 |
| Bra022636.1-P | Field mustard | golgi, plasma membrane | 81.37 | 82.63 |
| CDY61492 | Canola | golgi, plasma membrane | 71.86 | 81.47 |
| CDY14399 | Canola | mitochondrion | 67.3 | 80.09 |
| Bra003075.1-P | Field mustard | golgi, plasma membrane, plastid | 56.65 | 77.6 |
| VIT_16s0050g02540.t01 | Wine grape | plasma membrane | 60.08 | 63.45 |
| KRH64501 | Soybean | golgi, plasma membrane | 40.68 | 61.49 |
| Solyc03g007360.2.1 | Tomato | golgi, plasma membrane | 55.89 | 57.2 |
| PGSC0003DMT400023436 | Potato | golgi, plasma membrane | 32.32 | 54.14 |
| KRH16514 | Soybean | plasma membrane | 51.71 | 53.54 |
| KRH18150 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 51.71 | 53.33 |
| KRH53444 | Soybean | golgi, plasma membrane | 51.33 | 53.15 |
| EES00047 | Sorghum | plasma membrane | 50.19 | 50.97 |
| TraesCS1D01G125900.2 | Wheat | plasma membrane | 46.39 | 49.59 |
| TraesCS1A01G129600.1 | Wheat | plasma membrane | 46.01 | 49.19 |
| TraesCS1B01G147200.1 | Wheat | plasma membrane | 46.01 | 49.19 |
| KRH16511 | Soybean | golgi, plasma membrane | 48.29 | 48.85 |
| HORVU1Hr1G029920.4 | Barley | plasma membrane | 45.25 | 47.98 |
| KXG21564 | Sorghum | plasma membrane | 39.92 | 42.68 |
| Zm00001d010440_P001 | Maize | extracellular, golgi, plasma membrane | 38.02 | 42.02 |
| Os05t0214300-00 | Rice | golgi, plasma membrane | 41.06 | 41.54 |
| Zm00001d039347_P001 | Maize | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 41.44 | 41.13 |
| AT1G21460.1 | Thale cress | extracellular, golgi, plasma membrane | 38.4 | 40.89 |
| AT3G14770.1 | Thale cress | plasma membrane | 32.7 | 36.44 |
| AT3G28007.1 | Thale cress | plasma membrane | 34.6 | 36.26 |
| AT5G40260.1 | Thale cress | plasma membrane | 31.56 | 34.73 |
| AT5G62850.1 | Thale cress | plasma membrane | 31.18 | 34.17 |
| AT4G15920.1 | Thale cress | plasma membrane | 31.18 | 34.02 |
| AT4G10850.1 | Thale cress | plasma membrane | 33.08 | 33.72 |
| AT1G66770.1 | Thale cress | plasma membrane | 32.32 | 32.57 |
| AT3G16690.3 | Thale cress | plasma membrane | 31.18 | 30.94 |
| AT2G39060.1 | Thale cress | golgi, plasma membrane, vacuole | 29.66 | 30.23 |
| AT4G25010.1 | Thale cress | plasma membrane | 29.28 | 27.4 |
| AT5G50800.1 | Thale cress | plasma membrane | 30.42 | 27.21 |
| AT5G13170.1 | Thale cress | plasma membrane | 30.04 | 27.05 |
| AT3G48740.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 29.66 | 26.99 |
| AT5G23660.1 | Thale cress | plasma membrane | 28.9 | 26.67 |
| AT5G50790.1 | Thale cress | plasma membrane | 28.9 | 26.3 |
Protein Annotations
| Gene3D:1.20.1280.290 | MapMan:24.2.6.1 | EntrezGene:835400 | UniProt:A0A178U9N2 | ProteinID:AED96320.1 | EMBL:AK176340 |
| ArrayExpress:AT5G53190 | EnsemblPlantsGene:AT5G53190 | RefSeq:AT5G53190 | TAIR:AT5G53190 | RefSeq:AT5G53190-TAIR-G | EnsemblPlants:AT5G53190.1 |
| TAIR:AT5G53190.1 | Unigene:At.29569 | ProteinID:BAB08422.1 | EMBL:BT010416 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008643 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034219 |
| GO:GO:0051119 | RefSeq:NP_200131.2 | ProteinID:OAO89934.1 | PFAM:PF03083 | PO:PO:0001078 | PO:PO:0001185 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0025022 | PANTHER:PTHR10791 | PANTHER:PTHR10791:SF28 |
| UniProt:Q6NQN5 | Symbol:SWEET3 | InterPro:SWEET_sugar_transpr | TMHMM:TMhelix | UniParc:UPI00001BD850 | SEG:seg |
Description
SWEET3Bidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:A0A178U9N2]
Coordinates
chr5:-:21572143..21574329
Molecular Weight (calculated)
29539.2 Da
IEP (calculated)
9.320
GRAVY (calculated)
0.349
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDKLRLSIG ILGNGASLLL YTAPIVTFSR VFKKKSTEEF SCFPYVMTLF NCLIYTWYGL PIVSHLWENL PLVTINGVGI LLESIFIFIY FYYASPKEKI
101: KVGVTFVPVI VGFGLTTAIS ALVFDDHRHR KSFVGSVGLV ASISMYGSPL VVMKKVIETR SVEYMPFYLS FFSFLASSLW LAYGLLSHDL FLASPNMVAT
201: PLGILQLILY FKYKNKKDLA PTTMVITKRN DHDDKNKATL EFVVDVDRNS DTNEKNSNNA SSI
101: KVGVTFVPVI VGFGLTTAIS ALVFDDHRHR KSFVGSVGLV ASISMYGSPL VVMKKVIETR SVEYMPFYLS FFSFLASSLW LAYGLLSHDL FLASPNMVAT
201: PLGILQLILY FKYKNKKDLA PTTMVITKRN DHDDKNKATL EFVVDVDRNS DTNEKNSNNA SSI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.