Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 6
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G10850.1 | Thale cress | plasma membrane | 73.18 | 74.03 |
| Bra000725.1-P | Field mustard | plasma membrane | 50.19 | 73.6 |
| CDX90787 | Canola | plasma membrane | 61.3 | 73.39 |
| CDY05123 | Canola | plasma membrane | 60.92 | 72.94 |
| CDY40867 | Canola | plasma membrane | 66.67 | 69.88 |
| CDX86834 | Canola | plasma membrane | 66.28 | 69.48 |
| Bra035270.1-P | Field mustard | plasma membrane | 66.28 | 69.48 |
| KRG90087 | Soybean | golgi, plasma membrane, plastid | 49.43 | 50.39 |
| VIT_02s0025g02080.t01 | Wine grape | plasma membrane | 50.19 | 50.38 |
| KRH17602 | Soybean | golgi, plasma membrane, plastid | 49.04 | 49.81 |
| KRH41358 | Soybean | plasma membrane | 45.98 | 48.58 |
| EES06744 | Sorghum | golgi, plasma membrane, plastid | 44.83 | 46.8 |
| Solyc12g055870.1.1 | Tomato | golgi, plasma membrane | 42.91 | 46.67 |
| AT3G28007.1 | Thale cress | plasma membrane | 44.83 | 46.61 |
| TraesCS6A01G218800.1 | Wheat | golgi | 45.21 | 46.27 |
| TraesCS6D01G201900.1 | Wheat | plasma membrane | 45.21 | 46.27 |
| HORVU6Hr1G055960.1 | Barley | golgi, plasma membrane, plastid | 44.06 | 46.0 |
| TraesCS6B01G248300.1 | Wheat | plasma membrane | 44.83 | 45.88 |
| GSMUA_Achr10P... | Banana | golgi, plasma membrane, plastid | 45.59 | 45.77 |
| EES06723 | Sorghum | golgi, plasma membrane, plastid | 43.68 | 45.6 |
| Zm00001d015914_P005 | Maize | plasma membrane | 44.44 | 45.49 |
| AT5G62850.1 | Thale cress | plasma membrane | 41.76 | 45.42 |
| Os02t0301100-01 | Rice | plasma membrane | 44.83 | 45.17 |
| GSMUA_Achr8P25010_001 | Banana | plastid | 43.3 | 44.84 |
| GSMUA_Achr7P14690_001 | Banana | golgi, plasma membrane, plastid | 44.83 | 44.66 |
| Zm00001d015912_P001 | Maize | plasma membrane | 44.44 | 44.44 |
| Zm00001d015905_P001 | Maize | plasma membrane | 42.91 | 44.44 |
| Solyc08g082770.2.1 | Tomato | golgi, plasma membrane | 42.15 | 43.82 |
| PGSC0003DMT400031634 | Potato | golgi, plasma membrane | 32.18 | 43.52 |
| PGSC0003DMT400093003 | Potato | golgi, plasma membrane | 24.9 | 42.76 |
| OQU84855 | Sorghum | plasma membrane | 41.76 | 41.6 |
| AT5G40260.1 | Thale cress | plasma membrane | 37.55 | 41.0 |
| AT1G21460.1 | Thale cress | extracellular, golgi, plasma membrane | 37.16 | 39.27 |
| GSMUA_Achr4P09090_001 | Banana | plasma membrane | 44.06 | 38.33 |
| AT4G15920.1 | Thale cress | plasma membrane | 32.18 | 34.85 |
| AT3G14770.1 | Thale cress | plasma membrane | 31.03 | 34.32 |
| AT5G53190.1 | Thale cress | plasma membrane | 32.57 | 32.32 |
| GSMUA_Achr3P32170_001 | Banana | cytosol, peroxisome, plasma membrane | 41.0 | 31.85 |
| AT2G39060.1 | Thale cress | golgi, plasma membrane, vacuole | 30.65 | 31.01 |
| AT3G16690.3 | Thale cress | plasma membrane | 31.03 | 30.57 |
| AT5G23660.1 | Thale cress | plasma membrane | 31.03 | 28.42 |
| AT5G50790.1 | Thale cress | plasma membrane | 30.27 | 27.34 |
| AT4G25010.1 | Thale cress | plasma membrane | 28.74 | 26.69 |
| AT3G48740.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 29.5 | 26.64 |
| AT5G50800.1 | Thale cress | plasma membrane | 28.74 | 25.51 |
| AT5G13170.1 | Thale cress | plasma membrane | 28.35 | 25.34 |
Protein Annotations
| Gene3D:1.20.1280.290 | MapMan:24.2.6.1 | EntrezGene:842995 | ProteinID:AAG60070.1 | ProteinID:AEE34554.1 | ArrayExpress:AT1G66770 |
| EnsemblPlantsGene:AT1G66770 | RefSeq:AT1G66770 | TAIR:AT1G66770 | RefSeq:AT1G66770-TAIR-G | EnsemblPlants:AT1G66770.1 | TAIR:AT1G66770.1 |
| Unigene:At.66113 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0008643 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016043 | GO:GO:0034219 | GO:GO:0051119 | GO:GO:0051260 | RefSeq:NP_176849.1 |
| PFAM:PF03083 | PO:PO:0000084 | PANTHER:PTHR10791 | PANTHER:PTHR10791:SF105 | UniProt:Q9C9M9 | Symbol:SWEET6 |
| InterPro:SWEET_sugar_transpr | TMHMM:TMhelix | UniParc:UPI00000A6846 | SEG:seg | : | : |
Description
SWEET6Bidirectional sugar transporter SWEET6 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9M9]
Coordinates
chr1:-:24906451..24907236
Molecular Weight (calculated)
28869.4 Da
IEP (calculated)
9.322
GRAVY (calculated)
0.720
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MVHEQLNLIR KIVGILGNFI SLCLFLSPTP TFIHIVKKKS VEKYSPLPYL ATLLNCLVRA LYGLPMVHPD STLLVTISGI GITIEIVFLT IFFVFCGRQQ
101: HRLVISAVLT VQVVFVATLA VLVLTLEHTT DQRTISVGIV SCVFNAMMYA SPLSVMKMVI KTKSLEFMPF LLSVVGFLNA GVWTIYGFVP FDPFLAIPNG
201: IGCVFGLVQL ILYGTYYKST KGIMEERKNR LGYVGEVGLS NAIAQTEPEN IPYLNKRVSG V
101: HRLVISAVLT VQVVFVATLA VLVLTLEHTT DQRTISVGIV SCVFNAMMYA SPLSVMKMVI KTKSLEFMPF LLSVVGFLNA GVWTIYGFVP FDPFLAIPNG
201: IGCVFGLVQL ILYGTYYKST KGIMEERKNR LGYVGEVGLS NAIAQTEPEN IPYLNKRVSG V
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.