Factsheet for TraesCS6A01G218800.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	golgi, plasma membrane
iPSORT:	secretory
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G248300.1	Wheat	plasma membrane	98.82	98.82
TraesCS6D01G201900.1	Wheat	plasma membrane	97.65	97.65
HORVU6Hr1G055960.1	Barley	golgi, plasma membrane, plastid	94.12	96.0
Os02t0301100-01	Rice	plasma membrane	85.49	84.17
Zm00001d015905_P001	Maize	plasma membrane	82.35	83.33
EES06744	Sorghum	golgi, plasma membrane, plastid	81.57	83.2
Zm00001d015914_P005	Maize	plasma membrane	82.75	82.75
EES06723	Sorghum	golgi, plasma membrane, plastid	80.0	81.6
Zm00001d015912_P001	Maize	plasma membrane	75.69	73.95
OQU84855	Sorghum	plasma membrane	70.59	68.7
GSMUA_Achr10P...	Banana	golgi, plasma membrane, plastid	67.84	66.54
GSMUA_Achr7P14690_001	Banana	golgi, plasma membrane, plastid	67.45	65.65
GSMUA_Achr8P25010_001	Banana	plastid	56.86	57.54
VIT_02s0025g02080.t01	Wine grape	plasma membrane	58.43	57.31
CDX90787	Canola	plasma membrane	47.84	55.96
CDY05123	Canola	plasma membrane	47.45	55.5
KRG90087	Soybean	golgi, plasma membrane, plastid	55.69	55.47
KRH17602	Soybean	golgi, plasma membrane, plastid	55.69	55.25
Bra000725.1-P	Field mustard	plasma membrane	38.04	54.49
TraesCS7A01G533900.1	Wheat	plasma membrane	51.76	54.32
KRH41358	Soybean	plasma membrane	52.55	54.25
TraesCS7A01G503100.1	Wheat	plasma membrane	52.16	53.85
TraesCS2A01G043400.1	Wheat	plasma membrane	51.37	53.25
TraesCS1A01G360900.1	Wheat	plasma membrane	50.98	52.63
TraesCS7A01G159800.1	Wheat	plasma membrane	50.59	52.44
TraesCS2A01G051800.1	Wheat	plasma membrane	50.2	52.03
TraesCS2A01G043200.1	Wheat	plasma membrane	47.45	51.93
Bra035270.1-P	Field mustard	plasma membrane	50.59	51.81
CDX86834	Canola	plasma membrane	50.59	51.81
CDY40867	Canola	plasma membrane	50.59	51.81
GSMUA_Achr4P09090_001	Banana	plasma membrane	60.0	51.0
AT4G10850.1	Thale cress	plasma membrane	50.59	50.0
Solyc12g055870.1.1	Tomato	golgi, plasma membrane	46.27	49.17
TraesCS7A01G503200.1	Wheat	plasma membrane	47.45	45.83
Solyc08g082770.2.1	Tomato	golgi, plasma membrane	45.1	45.82
AT1G66770.1	Thale cress	plasma membrane	46.27	45.21
GSMUA_Achr3P32170_001	Banana	cytosol, peroxisome, plasma membrane	58.04	44.05
PGSC0003DMT400031634	Potato	golgi, plasma membrane	33.33	44.04
TraesCS7A01G503300.1	Wheat	plasma membrane	43.53	43.87
PGSC0003DMT400093003	Potato	golgi, plasma membrane	25.1	42.11
TraesCS1A01G265200.1	Wheat	golgi, plasma membrane, vacuole	41.18	40.08
TraesCS3A01G255300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	34.12	37.66
TraesCS3A01G408200.1	Wheat	golgi, plasma membrane	39.61	37.27
TraesCS6A01G148600.1	Wheat	plasma membrane	32.55	34.73
TraesCS5A01G038900.1	Wheat	plasma membrane	30.2	30.8
TraesCS5A01G039000.1	Wheat	plasma membrane	29.8	30.4
TraesCS1A01G129600.1	Wheat	plasma membrane	26.67	27.64
TraesCS1A01G050400.1	Wheat	plasma membrane	30.59	26.62
TraesCS5A01G289200.1	Wheat	plasma membrane	29.41	26.13
TraesCS7A01G147300.1	Wheat	plasma membrane	31.37	25.81
TraesCS6A01G009000.1	Wheat	plasma membrane	29.02	25.78
TraesCS6A01G009100.1	Wheat	plasma membrane	29.41	25.77
TraesCS6A01G382600.1	Wheat	plasma membrane	27.84	24.48
TraesCS4A01G140500.1	Wheat	golgi, plasma membrane, plastid, vacuole	28.63	24.17
TraesCS6A01G382400.1	Wheat	plasma membrane	27.84	24.07
TraesCS7A01G261100.1	Wheat	plasma membrane	28.24	23.76
TraesCS6A01G382500.1	Wheat	plasma membrane	25.88	21.5
TraesCS4A01G122100.1	Wheat	plasma membrane	25.88	21.22

Protein Annotations

EnsemblPlants:TraesCS6A01G218800.1	EnsemblPlantsGene:TraesCS6A01G218800	Gene3D:1.20.1280.290	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:SWEET_sugar_transpr	PANTHER:PTHR10791	PANTHER:PTHR10791:SF105	PFAM:PF03083	SEG:seg	TMHMM:TMhelix
MapMan:24.2.6.1	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:404696866..404700439

Molecular Weight (calculated)

27667.8 Da

IEP (calculated)

9.575

GRAVY (calculated)

0.769

Length

255 amino acids

Sequence
(BLAST)

001: MVSPDAIRTV IGVIGNGTAL VLFLSPVPTF ISIWKKKTVE QYSAVPYLAT LLNCMMWVLY GLPLVHPHSM LVITINGTGM LIELTYIALF LTFSVGAARR
101: RVLLLLVAEV AFVAGVAALV LSLAHTHDRR SMVVGILCVL FGTGMYAAPL SVMKMVIQTK SVEYMPLFLS VASLVNGICW TAYALIKFDL YITIPNGLGV
201: MFAVGQIILY AIYYKSTQQI LEARKRKADQ VPMTEVVVDG KSGSATNSGA ANGHY

Best Arabidopsis Sequence Match ( AT4G10850.1 )
(BLAST)

001: MVFAHLNLLR KIVGIIGNFI ALCLFLSPTP TFVRIVKKKS VEEYSPIPYL ATLINCLVWV LYGLPTVHPD STLVITINGT GILIEIVFLT IFFVYCGRQK
101: QRLIISAVIA AETAFIAILA VLVLTLQHTT EKRTMSVGIV CCVFNVMMYA SPLSVMKMVI KTKSVEFMPF WLSVAGFLNA GVWTIYALMP FDPFMAIPNG
201: IGCLFGLAQL ILYGAYYKST KRIMAERENQ PGYVGLSSAI ARTGSEKTAN TNQEPNNV

Arabidopsis Description

SWEET7Bidirectional sugar transporter SWEET7 [Source:UniProtKB/Swiss-Prot;Acc:Q8LBF7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.