Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 5
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09729 | Canola | golgi, plasma membrane, vacuole | 91.29 | 91.67 |
| CDX90555 | Canola | golgi, plasma membrane, vacuole | 90.46 | 90.83 |
| Bra012752.1-P | Field mustard | extracellular, golgi, vacuole | 90.04 | 90.42 |
| CDY24920 | Canola | extracellular, golgi, vacuole | 56.02 | 87.1 |
| Bra038060.1-P | Field mustard | extracellular, golgi, plasma membrane | 73.86 | 72.95 |
| AT3G16690.3 | Thale cress | plasma membrane | 69.29 | 63.02 |
| VIT_05s0077g02260.t01 | Wine grape | golgi, plasma membrane, vacuole | 58.92 | 60.94 |
| KRH12074 | Soybean | plasma membrane | 60.17 | 59.18 |
| KRH37080 | Soybean | plasma membrane | 59.34 | 58.61 |
| Solyc01g099870.1.1 | Tomato | plasma membrane, vacuole | 43.15 | 55.91 |
| PGSC0003DMT400063714 | Potato | plasma membrane | 51.45 | 52.32 |
| OQU86800 | Sorghum | golgi, plasma membrane, vacuole | 51.87 | 51.65 |
| Zm00001d040656_P002 | Maize | golgi, plasma membrane, vacuole | 48.55 | 51.54 |
| Zm00001d009071_P002 | Maize | plasma membrane | 50.21 | 50.63 |
| GSMUA_Achr8P10260_001 | Banana | plasma membrane | 49.38 | 48.97 |
| TraesCS5B01G040700.1 | Wheat | golgi, plasma membrane, vacuole | 48.55 | 47.76 |
| TraesCS5D01G046300.1 | Wheat | plasma membrane | 47.3 | 46.53 |
| TraesCS5A01G038900.1 | Wheat | plasma membrane | 48.13 | 46.4 |
| TraesCS5A01G039000.1 | Wheat | plasma membrane | 46.89 | 45.2 |
| HORVU0Hr1G010080.2 | Barley | plasma membrane | 49.38 | 44.24 |
| TraesCS5B01G040800.1 | Wheat | plasma membrane | 48.96 | 43.87 |
| TraesCS5D01G046400.1 | Wheat | plasma membrane | 47.72 | 42.75 |
| GSMUA_Achr11P... | Banana | plasma membrane | 46.47 | 37.84 |
| AT3G28007.1 | Thale cress | plasma membrane | 38.59 | 37.05 |
| AT1G21460.1 | Thale cress | extracellular, golgi, plasma membrane | 37.76 | 36.84 |
| AT5G62850.1 | Thale cress | plasma membrane | 36.1 | 36.25 |
| AT5G40260.1 | Thale cress | plasma membrane | 34.85 | 35.15 |
| AT4G10850.1 | Thale cress | plasma membrane | 35.68 | 33.33 |
| AT1G66770.1 | Thale cress | plasma membrane | 34.85 | 32.18 |
| AT2G39060.1 | Thale cress | golgi, plasma membrane, vacuole | 34.02 | 31.78 |
| AT3G14770.1 | Thale cress | plasma membrane | 30.71 | 31.36 |
| AT5G53190.1 | Thale cress | plasma membrane | 34.02 | 31.18 |
| AT5G23660.1 | Thale cress | plasma membrane | 34.44 | 29.12 |
| AT4G25010.1 | Thale cress | plasma membrane | 33.61 | 28.83 |
| AT5G50790.1 | Thale cress | plasma membrane | 34.44 | 28.72 |
| AT3G48740.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 34.02 | 28.37 |
| AT5G50800.1 | Thale cress | plasma membrane | 34.02 | 27.89 |
| AT5G13170.1 | Thale cress | plasma membrane | 33.61 | 27.74 |
| Bra008206.1-P | Field mustard | nucleus | 3.32 | 14.55 |
Protein Annotations
| Gene3D:1.20.1280.290 | MapMan:24.2.6.1 | ArrayExpress:AT4G15920 | EnsemblPlantsGene:AT4G15920 | RefSeq:AT4G15920 | TAIR:AT4G15920 |
| RefSeq:AT4G15920-TAIR-G | EnsemblPlants:AT4G15920.1 | TAIR:AT4G15920.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005353 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006950 | GO:GO:0006995 |
| GO:GO:0007154 | GO:GO:0007623 | GO:GO:0008150 | GO:GO:0008643 | GO:GO:0009605 | GO:GO:0009628 |
| GO:GO:0009646 | GO:GO:0009705 | GO:GO:0009750 | GO:GO:0009987 | GO:GO:0009991 | GO:GO:0015755 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0051119 | GO:GO:0051260 | GO:GO:0070417 |
| GO:GO:1902334 | PFAM:PF03083 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0005352 | PO:PO:0005421 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR10791 |
| PANTHER:PTHR10791:SF29 | Symbol:SWEET17 | InterPro:SWEET_sugar_transpr | TMHMM:TMhelix | UniParc:UPI0001A7B0D3 | : |
Description
SWEET17Nodulin MtN3 family protein [Source:TAIR;Acc:AT4G15920]
Coordinates
chr4:-:9030486..9033648
Molecular Weight (calculated)
26814.9 Da
IEP (calculated)
6.534
GRAVY (calculated)
0.546
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEASFYIGV IGNVISVLVF LSPVETFWKI VKRRSTEEYK SLPYICTLLG SSLWTYYGIV TPGEYLVSTV NGFGALVETI YVSLFLFYAP RHLKLKTVDV
101: EAMLNVFFPI AAIVATRSAF EDEKMRSQSI GFISAGLNII MYGSPLSAMK TVVTTKSVKY MPFWLSFFLF LNGAIWAVYA LLQHDVFLLV PNGVGFVFGT
201: MQLILYGIYR NAKPVGLSNG LSEIAQDEEE GLTSRVEPLL S
101: EAMLNVFFPI AAIVATRSAF EDEKMRSQSI GFISAGLNII MYGSPLSAMK TVVTTKSVKY MPFWLSFFLF LNGAIWAVYA LLQHDVFLLV PNGVGFVFGT
201: MQLILYGIYR NAKPVGLSNG LSEIAQDEEE GLTSRVEPLL S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.