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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, extracellular

Predictor Summary:
  • cytosol 1
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 5
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi, plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008206.1-P Field mustard nucleus 22.54 100.0
CDY24920 Canola extracellular, golgi, vacuole 61.89 97.42
Bra012752.1-P Field mustard extracellular, golgi, vacuole 74.59 75.83
AT4G15920.1 Thale cress plasma membrane 72.95 73.86
Bra021190.1-P Field mustard plasma membrane 62.7 66.23
Bra001638.1-P Field mustard plasma membrane 59.84 63.2
Solyc01g099870.1.1 Tomato plasma membrane, vacuole 41.39 54.3
VIT_05s0077g02260.t01 Wine grape golgi, plasma membrane, vacuole 50.41 52.79
KRH37080 Soybean plasma membrane 48.77 48.77
KRH12074 Soybean plasma membrane 48.77 48.57
PGSC0003DMT400063714 Potato plasma membrane 43.03 44.3
GSMUA_Achr8P10260_001 Banana plasma membrane 42.62 42.8
OQU86800 Sorghum golgi, plasma membrane, vacuole 42.21 42.56
Zm00001d009071_P002 Maize plasma membrane 40.98 41.84
Zm00001d040656_P002 Maize golgi, plasma membrane, vacuole 38.52 41.41
TraesCS5B01G040700.1 Wheat golgi, plasma membrane, vacuole 40.57 40.41
TraesCS5D01G046300.1 Wheat plasma membrane 39.75 39.59
TraesCS5A01G038900.1 Wheat plasma membrane 39.75 38.8
TraesCS5A01G039000.1 Wheat plasma membrane 38.11 37.2
TraesCS5B01G040800.1 Wheat plasma membrane 39.75 36.06
HORVU0Hr1G010080.2 Barley plasma membrane 39.34 35.69
TraesCS5D01G046400.1 Wheat plasma membrane 38.93 35.32
GSMUA_Achr11P... Banana plasma membrane 41.8 34.46
Bra029245.1-P Field mustard extracellular, golgi, plasma membrane 33.2 33.75
Bra033034.1-P Field mustard plasma membrane 32.79 32.65
Bra029244.1-P Field mustard plasma membrane 31.97 32.5
Bra017916.1-P Field mustard extracellular, golgi 32.38 32.11
Bra035879.1-P Field mustard extracellular, golgi, plasma membrane 31.56 32.08
Bra016421.1-P Field mustard golgi, plasma membrane 32.79 31.87
Bra035270.1-P Field mustard plasma membrane 31.97 31.33
Bra025317.1-P Field mustard plasma membrane 31.56 31.05
Bra025595.1-P Field mustard plasma membrane 29.92 30.67
Bra000725.1-P Field mustard plasma membrane 22.13 30.34
Bra012412.1-P Field mustard plasma membrane 20.08 28.0
Bra021577.1-P Field mustard plasma membrane 27.05 27.97
Bra022636.1-P Field mustard golgi, plasma membrane 29.51 27.8
Bra010477.1-P Field mustard golgi, plasma membrane 30.33 27.21
Bra027314.1-P Field mustard plasma membrane 23.77 26.98
Bra013854.1-P Field mustard golgi, plasma membrane 29.51 26.37
Bra040489.1-P Field mustard golgi, plasma membrane 31.15 25.85
Bra000116.1-P Field mustard golgi, plasma membrane 28.28 25.56
Bra023394.1-P Field mustard plasma membrane 30.33 24.92
Bra026487.1-P Field mustard endoplasmic reticulum, plasma membrane 28.28 24.91
Bra019560.1-P Field mustard plasma membrane 28.28 24.21
Bra009700.1-P Field mustard plasma membrane 28.28 23.96
Bra018039.1-P Field mustard plasma membrane 27.87 23.53
Bra029914.1-P Field mustard plasma membrane 27.87 23.45
Bra003075.1-P Field mustard golgi, plasma membrane, plastid 18.03 22.92
Bra022761.1-P Field mustard golgi, plasma membrane 26.64 22.49
Bra019197.1-P Field mustard plasma membrane 21.72 22.27
Bra006185.1-P Field mustard golgi, plasma membrane, plastid 25.82 19.94
Bra008850.1-P Field mustard plasma membrane 13.11 15.31
Protein Annotations
EnsemblPlants:Bra038060.1EnsemblPlants:Bra038060.1-PEnsemblPlantsGene:Bra038060Gene3D:1.20.1280.290GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0008643GO:GO:0016020GO:GO:0016021InterPro:SWEET_sugar_transprPANTHER:PTHR10791
PANTHER:PTHR10791:SF29PFAM:PF03083SEG:segTMHMM:TMhelixUniParc:UPI0002545C09UniProt:M4FAE6
MapMan:24.2.6.1:::::
Description
AT4G15920 (E=6e-095) | INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MtN3 and saliva related transmembrane protein, conserved region (InterPro:IPR018169), RAG1-activating protein 1 homologue (InterPro:IPR018179), MtN3 and saliva related transmembrane protein (InterPro:IPR004316); BEST Arabidopsis thaliana protein match is: nodulin MtN3 family protein (TAIR:AT3G16690.1); Has 546 Blast hits to 527 proteins in 90 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 0; Plants - 300; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).
Coordinates
chrA08:-:6846574..6864808
Molecular Weight (calculated)
27313.3 Da
IEP (calculated)
9.217
GRAVY (calculated)
0.236
Length
244 amino acids
Sequence
(BLAST)
001: MAEASFYIGV VGNVISVLVF LSPVETFWKI VKRKSTEEYK SLPYICTLLG SSLWTYYGIV TPGEYLVSTV NGFGALVEII YVSLFVLYAP RHLKLHTIVV
101: VSMLNVLFPI AAIAATRSAF KDEKTRSQSM GFICAGLNII MYGSPLSAMK TVVTTKSVKY MPFWLSFFLF LNGAIWTVYA SLQHDVFLLM AKESSGGGGG
201: EAEQEEEERW RKRDDKDTKG RTGCGAGWEK TTHAAEKIRF RFIF
Best Arabidopsis Sequence Match ( AT4G15920.1 )
(BLAST)
001: MAEASFYIGV IGNVISVLVF LSPVETFWKI VKRRSTEEYK SLPYICTLLG SSLWTYYGIV TPGEYLVSTV NGFGALVETI YVSLFLFYAP RHLKLKTVDV
101: EAMLNVFFPI AAIVATRSAF EDEKMRSQSI GFISAGLNII MYGSPLSAMK TVVTTKSVKY MPFWLSFFLF LNGAIWAVYA LLQHDVFLLV PNGVGFVFGT
201: MQLILYGIYR NAKPVGLSNG LSEIAQDEEE GLTSRVEPLL S
Arabidopsis Description
SWEET17Nodulin MtN3 family protein [Source:TAIR;Acc:AT4G15920]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.