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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • golgi 5
  • plasma membrane 7
  • endoplasmic reticulum 4
  • vacuole 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra025595.1-P plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G40260.1 Bra025595.1-P AT5G40260.1 24027245
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY44578 Canola plasma membrane 99.58 99.58
AT5G40260.1 Thale cress plasma membrane 72.27 71.97
Os09t0256650-00 Rice extracellular 21.85 53.06
HORVU2Hr1G006520.1 Barley peroxisome, plasma membrane, vacuole 48.32 49.36
TraesCS2A01G043200.1 Wheat plasma membrane 47.9 48.93
TraesCS2B01G055700.1 Wheat plasma membrane 47.9 48.93
TraesCS2D01G042400.1 Wheat plasma membrane 47.9 48.93
TraesCS7B01G410700.1 Wheat plasma membrane 50.0 48.37
TraesCS7A01G533900.1 Wheat plasma membrane 48.74 47.74
TraesCS7D01G521400.1 Wheat plasma membrane 48.74 47.74
EES20039 Sorghum golgi, plasma membrane, vacuole 47.9 47.7
TraesCS7B01G451200.1 Wheat plasma membrane 48.32 47.33
TraesCS7A01G503100.1 Wheat plasma membrane 48.74 46.96
Solyc02g086920.1.1 Tomato golgi, plasma membrane 45.8 46.78
TraesCS2B01G056100.1 Wheat plasma membrane 48.32 46.75
TraesCS7D01G160600.1 Wheat plasma membrane 48.32 46.75
TraesCS1D01G365200.1 Wheat plasma membrane 48.32 46.56
TraesCS1A01G360900.1 Wheat plasma membrane 48.32 46.56
Zm00001d011299_P001 Maize plasma membrane 47.48 46.5
TraesCSU01G013400.1 Wheat plasma membrane 47.9 46.34
TraesCS2B01G055900.1 Wheat plasma membrane 47.9 46.34
TraesCS1B01G377200.1 Wheat plasma membrane 47.9 46.15
TraesCS7B01G064800.1 Wheat plasma membrane 39.92 46.12
TraesCSU01G191700.1 Wheat plasma membrane 47.48 45.94
TraesCSU01G162000.1 Wheat plasma membrane 47.48 45.94
TraesCS2A01G043400.1 Wheat plasma membrane 47.48 45.94
TraesCS2A01G051800.1 Wheat plasma membrane 47.48 45.94
TraesCS2D01G042500.1 Wheat plasma membrane 47.48 45.94
HORVU2Hr1G006510.1 Barley plasma membrane 47.48 45.94
TraesCS2D01G042600.1 Wheat plasma membrane 47.48 45.94
TraesCS7A01G159800.1 Wheat plasma membrane 47.48 45.94
TraesCSU01G181700.1 Wheat plasma membrane 47.48 45.94
TraesCS7B01G064600.1 Wheat plasma membrane 47.48 45.94
TraesCSU01G013200.1 Wheat plasma membrane 47.48 45.94
TraesCS7B01G064400.1 Wheat plasma membrane 47.48 45.94
GSMUA_Achr10P... Banana extracellular, golgi, plasma membrane 44.96 45.73
TraesCS7B01G064300.1 Wheat plasma membrane 47.06 45.53
TraesCS7B01G064700.1 Wheat plasma membrane 47.06 45.53
EES01039 Sorghum plasma membrane 46.64 45.49
Zm00001d044421_P001 Maize plasma membrane 46.64 45.49
KRH20314 Soybean plasma membrane 46.64 45.31
Bra025317.1-P Field mustard plasma membrane 47.06 45.16
KRG93333 Soybean plasma membrane 46.64 45.12
KRG93335 Soybean plasma membrane 46.64 45.12
Bra035879.1-P Field mustard extracellular, golgi, plasma membrane 45.38 45.0
HORVU7Hr1G117490.1 Barley plasma membrane 49.16 45.0
Bra029245.1-P Field mustard extracellular, golgi, plasma membrane 44.96 44.58
Bra033034.1-P Field mustard plasma membrane 45.8 44.49
GSMUA_Achr6P09180_001 Banana plasma membrane 43.7 44.26
TraesCS7B01G410800.1 Wheat golgi, plasma membrane, vacuole 32.77 43.58
Bra029244.1-P Field mustard plasma membrane 43.7 43.33
Os05t0588500-01 Rice golgi, plasma membrane, vacuole 42.86 43.04
Os01t0605700-01 Rice golgi, plasma membrane, plastid 45.8 42.91
Bra000725.1-P Field mustard plasma membrane 31.93 42.7
Os01t0606000-00 Rice plasma membrane 46.22 42.47
Bra035270.1-P Field mustard plasma membrane 43.28 41.37
TraesCS7D01G490600.1 Wheat plasma membrane 28.15 41.36
HORVU1Hr1G079940.2 Barley peroxisome, plasma membrane, plastid 49.58 41.12
TraesCS7A01G503300.1 Wheat plasma membrane 43.28 40.71
PGSC0003DMT400001425 Potato golgi, plasma membrane 30.67 40.33
TraesCSU01G232400.1 Wheat plasma membrane 32.77 40.0
TraesCS2D01G052100.1 Wheat plasma membrane 32.77 40.0
TraesCS2B01G055800.1 Wheat plasma membrane 47.9 39.58
TraesCS7B01G064500.1 Wheat plasma membrane 32.35 39.49
TraesCS3D01G227000.1 Wheat plasma membrane 33.61 39.41
Os09t0258700-00 Rice plasma membrane 36.55 39.19
TraesCS7A01G503200.1 Wheat plasma membrane 43.28 39.02
Bra017916.1-P Field mustard extracellular, golgi 39.92 38.62
Solyc11g028270.1.1 Tomato extracellular 28.99 38.55
Bra001638.1-P Field mustard plasma membrane 37.4 38.53
Bra021190.1-P Field mustard plasma membrane 35.29 36.36
Bra016421.1-P Field mustard golgi, plasma membrane 38.24 36.26
TraesCSU01G249100.1 Wheat golgi, plasma membrane, vacuole 21.85 35.86
TraesCS2B01G056000.2 Wheat plasma membrane 41.18 35.77
TraesCSU01G249000.1 Wheat golgi, plasma membrane, vacuole 21.43 35.17
Bra022636.1-P Field mustard golgi, plasma membrane 38.24 35.14
Bra012752.1-P Field mustard extracellular, golgi, vacuole 34.87 34.58
Os12t0178500-00 Rice plasma membrane 29.83 33.97
Bra027314.1-P Field mustard plasma membrane 28.99 32.09
Bra021577.1-P Field mustard plasma membrane 30.67 30.93
Bra012412.1-P Field mustard plasma membrane 22.69 30.86
Bra019560.1-P Field mustard plasma membrane 36.13 30.18
Bra038060.1-P Field mustard extracellular, golgi, plasma membrane 30.67 29.92
Bra003075.1-P Field mustard golgi, plasma membrane, plastid 23.95 29.69
Bra018039.1-P Field mustard plasma membrane 35.71 29.41
Bra029914.1-P Field mustard plasma membrane 35.71 29.31
Bra013854.1-P Field mustard golgi, plasma membrane 33.61 29.3
Bra026487.1-P Field mustard endoplasmic reticulum, plasma membrane 34.03 29.24
Bra009700.1-P Field mustard plasma membrane 35.29 29.17
Bra010477.1-P Field mustard golgi, plasma membrane 33.19 29.04
Bra000116.1-P Field mustard golgi, plasma membrane 31.93 28.15
Bra040489.1-P Field mustard golgi, plasma membrane 33.61 27.21
Bra023394.1-P Field mustard plasma membrane 33.19 26.6
Bra022761.1-P Field mustard golgi, plasma membrane 31.93 26.3
Os09t0254600-00 Rice plastid 27.73 25.58
Bra019197.1-P Field mustard plasma membrane 25.21 25.21
Bra006185.1-P Field mustard golgi, plasma membrane, plastid 29.83 22.47
Bra008850.1-P Field mustard plasma membrane 17.65 20.1
Bra008206.1-P Field mustard nucleus 0.84 3.64
Protein Annotations
Gene3D:1.20.1280.290MapMan:24.2.6.1EnsemblPlantsGene:Bra025595EnsemblPlants:Bra025595.1EnsemblPlants:Bra025595.1-PGO:GO:0005575
GO:GO:0005623GO:GO:0005886GO:GO:0006810GO:GO:0007275GO:GO:0008150GO:GO:0008643
GO:GO:0009555GO:GO:0009653GO:GO:0009987GO:GO:0010208GO:GO:0010584GO:GO:0016020
GO:GO:0016021GO:GO:0016043GO:GO:0051260GO:GO:0052543UniProt:M4E9Y8PFAM:PF03083
PANTHER:PTHR10791PANTHER:PTHR10791:SF42InterPro:SWEET_sugar_transprTMHMM:TMhelixUniParc:UPI0002544D1F:
Description
AT5G40260 (E=5e-095) | nodulin MtN3 family protein
Coordinates
chrA04:+:7617958..7619243
Molecular Weight (calculated)
26795.3 Da
IEP (calculated)
9.039
GRAVY (calculated)
0.639
Length
238 amino acids
Sequence
(BLAST)
001: MVDAKQVRFI VGVIGNVISF FLFFSPMPTF WRIFKNKSVE EFQPWPYVAT MMNCMLWVFY GLPVVHKDSI LVTTINAVGM GFEAFYISVF LIYCGGKKNF
101: RRNIGLYLVA EVIAVAGIVL ITLFAIQNEF AKQTFVGVIC DVFNIAMYGA PSLVIKKVIR TRSVEYMPFL LSFVSFVNAG IWTAYSLIYK LDLYVLISNG
201: LGTALCASQL IVYGLYRNAT PRDEDKTKPS EIEIPATA
Best Arabidopsis Sequence Match ( AT5G40260.1 )
(BLAST)
001: MVDAKQVRFI IGVIGNVISF GLFAAPAKTF WRIFKKKSVE EFSYVPYVAT VMNCMLWVFY GLPVVHKDSI LVSTINGVGL VIELFYVGVY LMYCGHKKNH
101: RRNILGFLAL EVILVVAIIL ITLFALKGDF VKQTFVGVIC DVFNIAMYGA PSLAIIKVVK TKSVEYMPFL LSLVCFVNAG IWTTYSLIFK IDYYVLASNG
201: IGTFLALSQL IVYFMYYKST PKEKTVKPSE VEISATERV
Arabidopsis Description
SWEET8Bidirectional sugar transporter SWEET8 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFH5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.