Subcellular Localization
min:
: max
Winner_takes_all: golgi, plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 2
- golgi 3
- plasma membrane 4
- endoplasmic reticulum 2
- vacuole 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0226300-01 | |
| Os01t0605700-01 | plasma membrane, plasma membrane |
| Os01t0606000-00 | plasma membrane, plasma membrane |
| Os01t0736900-01 | |
| Os02t0265900-01 | |
| Os05t0526400-01 | |
| Os05t0588500-01 | plasma membrane, plasma membrane |
| Os06t0503400-01 | |
| Os09t0254600-00 | plasma membrane, plasma membrane |
| Os09t0256650-00 | plasma membrane, plasma membrane |
| Os09t0258700-00 | plasma membrane, plasma membrane |
| Os12t0178500-00 | plasma membrane, plasma membrane |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os01t0606000-00 | Rice | plasma membrane | 93.31 | 91.51 |
| TraesCS7B01G410700.1 | Wheat | plasma membrane | 77.95 | 80.49 |
| Os09t0256650-00 | Rice | extracellular | 30.32 | 78.57 |
| TraesCS7A01G533900.1 | Wheat | plasma membrane | 74.41 | 77.78 |
| TraesCS7D01G521400.1 | Wheat | plasma membrane | 74.41 | 77.78 |
| Zm00001d044421_P001 | Maize | plasma membrane | 74.41 | 77.46 |
| EES01039 | Sorghum | plasma membrane | 74.41 | 77.46 |
| TraesCS7B01G451200.1 | Wheat | plasma membrane | 74.02 | 77.37 |
| TraesCS7A01G503100.1 | Wheat | plasma membrane | 75.2 | 77.33 |
| Zm00001d011299_P001 | Maize | plasma membrane | 73.62 | 76.95 |
| TraesCS1A01G360900.1 | Wheat | plasma membrane | 74.02 | 76.11 |
| TraesCS1B01G377200.1 | Wheat | plasma membrane | 73.62 | 75.71 |
| TraesCS7B01G410800.1 | Wheat | golgi, plasma membrane, vacuole | 53.15 | 75.42 |
| TraesCS1D01G365200.1 | Wheat | plasma membrane | 73.23 | 75.3 |
| TraesCSU01G162000.1 | Wheat | plasma membrane | 69.29 | 71.54 |
| TraesCS2B01G055900.1 | Wheat | plasma membrane | 69.29 | 71.54 |
| TraesCS2B01G056100.1 | Wheat | plasma membrane | 69.29 | 71.54 |
| TraesCS2D01G042500.1 | Wheat | plasma membrane | 69.29 | 71.54 |
| TraesCS2D01G042600.1 | Wheat | plasma membrane | 69.29 | 71.54 |
| HORVU2Hr1G006510.1 | Barley | plasma membrane | 69.29 | 71.54 |
| TraesCSU01G181700.1 | Wheat | plasma membrane | 69.29 | 71.54 |
| TraesCSU01G191700.1 | Wheat | plasma membrane | 69.29 | 71.54 |
| TraesCS7B01G064400.1 | Wheat | plasma membrane | 68.9 | 71.14 |
| TraesCSU01G013400.1 | Wheat | plasma membrane | 68.9 | 71.14 |
| TraesCS2A01G051800.1 | Wheat | plasma membrane | 68.9 | 71.14 |
| TraesCS7B01G064600.1 | Wheat | plasma membrane | 68.9 | 71.14 |
| TraesCS2A01G043400.1 | Wheat | plasma membrane | 68.5 | 70.73 |
| TraesCS7A01G159800.1 | Wheat | plasma membrane | 68.5 | 70.73 |
| TraesCS7B01G064800.1 | Wheat | plasma membrane | 57.09 | 70.39 |
| TraesCS7D01G490600.1 | Wheat | plasma membrane | 44.88 | 70.37 |
| TraesCSU01G249100.1 | Wheat | golgi, plasma membrane, vacuole | 40.16 | 70.34 |
| TraesCSU01G249000.1 | Wheat | golgi, plasma membrane, vacuole | 40.16 | 70.34 |
| TraesCS7B01G064300.1 | Wheat | plasma membrane | 68.11 | 70.33 |
| TraesCSU01G013200.1 | Wheat | plasma membrane | 68.11 | 70.33 |
| TraesCS7D01G160600.1 | Wheat | plasma membrane | 68.11 | 70.33 |
| HORVU7Hr1G117490.1 | Barley | plasma membrane | 71.26 | 69.62 |
| TraesCS7B01G064700.1 | Wheat | plasma membrane | 67.32 | 69.51 |
| TraesCS2D01G052100.1 | Wheat | plasma membrane | 52.36 | 68.21 |
| TraesCSU01G232400.1 | Wheat | plasma membrane | 51.97 | 67.69 |
| TraesCS7B01G064500.1 | Wheat | plasma membrane | 51.18 | 66.67 |
| Os05t0588500-01 | Rice | golgi, plasma membrane, vacuole | 61.42 | 65.82 |
| GSMUA_Achr10P... | Banana | extracellular, golgi, plasma membrane | 60.24 | 65.38 |
| HORVU1Hr1G079940.2 | Barley | peroxisome, plasma membrane, plastid | 72.44 | 64.11 |
| Os09t0258700-00 | Rice | plasma membrane | 55.51 | 63.51 |
| GSMUA_Achr6P09180_001 | Banana | plasma membrane | 58.66 | 63.4 |
| Os12t0178500-00 | Rice | plasma membrane | 50.0 | 60.77 |
| TraesCS2B01G055800.1 | Wheat | plasma membrane | 68.9 | 60.76 |
| TraesCS7A01G503300.1 | Wheat | plasma membrane | 60.24 | 60.47 |
| TraesCS7A01G503200.1 | Wheat | plasma membrane | 62.2 | 59.85 |
| VIT_14s0066g01420.t01 | Wine grape | plasma membrane | 58.27 | 58.27 |
| TraesCS2B01G056000.2 | Wheat | plasma membrane | 61.02 | 56.57 |
| CDY49756 | Canola | plasma membrane | 53.94 | 55.92 |
| Bra033034.1-P | Field mustard | plasma membrane | 53.94 | 55.92 |
| VIT_17s0000g08110.t01 | Wine grape | cytosol, golgi, plasma membrane | 51.18 | 55.56 |
| KRG93335 | Soybean | plasma membrane | 53.54 | 55.28 |
| Bra025317.1-P | Field mustard | plasma membrane | 53.94 | 55.24 |
| KRH20314 | Soybean | plasma membrane | 53.15 | 55.1 |
| PGSC0003DMT400069697 | Potato | cytosol, golgi, plasma membrane | 51.57 | 55.04 |
| KRG93333 | Soybean | plasma membrane | 53.15 | 54.88 |
| CDY04003 | Canola | plasma membrane | 53.15 | 54.66 |
| Solyc06g071400.2.1 | Tomato | cytosol, golgi, plasma membrane | 50.79 | 54.2 |
| Solyc03g114200.2.1 | Tomato | golgi, plasma membrane, plastid | 50.0 | 53.81 |
| AT3G28007.1 | Thale cress | plasma membrane | 53.15 | 53.78 |
| CDY16757 | Canola | extracellular, peroxisome, plasma membrane | 50.39 | 53.33 |
| CDY56741 | Canola | plasma membrane | 50.39 | 53.33 |
| Bra035879.1-P | Field mustard | extracellular, golgi, plasma membrane | 50.0 | 52.92 |
| CDY45751 | Canola | extracellular, golgi, plasma membrane | 48.82 | 51.67 |
| Os02t0301100-01 | Rice | plasma membrane | 52.36 | 51.35 |
| KRH57053 | Soybean | plasma membrane | 45.67 | 51.33 |
| CDY30733 | Canola | extracellular, golgi, plasma membrane | 48.43 | 51.25 |
| Bra029245.1-P | Field mustard | extracellular, golgi, plasma membrane | 48.43 | 51.25 |
| AT5G62850.1 | Thale cress | plasma membrane | 47.64 | 50.42 |
| KRH03315 | Soybean | golgi, plasma membrane, plastid | 44.49 | 50.0 |
| Solyc02g086920.1.1 | Tomato | golgi, plasma membrane | 45.67 | 49.79 |
| PGSC0003DMT400001425 | Potato | golgi, plasma membrane | 35.04 | 49.17 |
| CDY30734 | Canola | plasma membrane | 45.67 | 48.33 |
| Bra029244.1-P | Field mustard | plasma membrane | 45.67 | 48.33 |
| CDY36831 | Canola | plasma membrane | 44.09 | 47.06 |
| AT5G40260.1 | Thale cress | plasma membrane | 43.7 | 46.44 |
| CDY44578 | Canola | plasma membrane | 43.31 | 46.22 |
| CDX86454 | Canola | plasma membrane, plastid | 53.94 | 46.13 |
| Bra025595.1-P | Field mustard | plasma membrane | 42.91 | 45.8 |
| VIT_17s0000g08130.t01 | Wine grape | golgi, plasma membrane, vacuole | 27.56 | 45.45 |
| CDY44448 | Canola | plasma membrane, plastid | 53.94 | 45.36 |
| Os09t0254600-00 | Rice | plastid | 43.7 | 43.02 |
| Os05t0426000-01 | Rice | plasma membrane | 43.7 | 42.53 |
| CDX84358 | Canola | plasma membrane | 34.25 | 41.63 |
| Solyc11g028270.1.1 | Tomato | extracellular | 28.74 | 40.78 |
| Os01t0881300-02 | Rice | plasma membrane | 43.31 | 40.29 |
| Os01t0700100-01 | Rice | endoplasmic reticulum, plasma membrane, vacuole | 33.46 | 36.96 |
| CDY45750 | Canola | cytosol, golgi, plasma membrane | 39.37 | 34.6 |
| Os01t0541800-01 | Rice | plasma membrane | 33.07 | 34.57 |
| Os12t0476200-01 | Rice | extracellular, golgi | 33.86 | 29.05 |
| Os05t0214300-00 | Rice | golgi, plasma membrane | 28.74 | 28.08 |
| Os03t0347500-01 | Rice | golgi, plasma membrane | 32.68 | 27.67 |
| Os02t0513100-01 | Rice | golgi, plasma membrane, plastid | 33.86 | 26.96 |
| Os11t0508600-01 | Rice | golgi, plasma membrane | 31.5 | 26.4 |
| Os08t0535200-01 | Rice | golgi, plasma membrane, plastid | 30.71 | 25.41 |
| Os09t0508250-00 | Rice | extracellular, golgi | 15.35 | 22.29 |
| Os03t0341300-01 | Rice | plasma membrane | 21.65 | 21.65 |
Protein Annotations
| Gene3D:1.20.1280.290 | MapMan:24.2.6.1 | EntrezGene:4324213 | EMBL:AK099440 | ProteinID:BAB78664.1 | ProteinID:BAB92461.1 |
| ProteinID:BAF05436.1 | ProteinID:BAS73067.1 | ProteinID:EAZ12625.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005887 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008643 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034219 | GO:GO:0051119 | EnsemblPlantsGene:Os01g0605700 | EnsemblPlants:Os01t0605700-01 |
| PFAM:PF03083 | PANTHER:PTHR10791 | PANTHER:PTHR10791:SF68 | UniProt:Q8W0K2 | InterPro:SWEET_sugar_transpr | TMHMM:TMhelix |
| UniParc:UPI00000ABC6D | RefSeq:XP_015631208.1 | SEG:seg | : | : | : |
Description
SWEET6BMtN3 and saliva related transmembrane protein family protein. (Os01t0605700-01)
Coordinates
chr1:+:23864681..23867205
Molecular Weight (calculated)
27957.3 Da
IEP (calculated)
9.841
GRAVY (calculated)
0.780
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MISPDAARNV VGIIGNVISF GLFLSPVPTF WRICKRKDVE QFKADPYLAT LLNCMLWVFY GIPIVHPNSI LVVTINGIGL IVEGTYLFIF FLYSPNKKRL
101: RMLAVLGVEL VFMLAVILGV LLSAHTHKKR SMIVGILCVF FGSIMYFSPL TIMGKVIKTK SVEYMPFFLS LVCFLNGVCW TAYALIRFDI YVTIPNGLGA
201: IFGAIQLILY ACYYRTTPKK TKAAKDVEMP SVISGPGAAA TASGGSVVSV TVER
101: RMLAVLGVEL VFMLAVILGV LLSAHTHKKR SMIVGILCVF FGSIMYFSPL TIMGKVIKTK SVEYMPFFLS LVCFLNGVCW TAYALIRFDI YVTIPNGLGA
201: IFGAIQLILY ACYYRTTPKK TKAAKDVEMP SVISGPGAAA TASGGSVVSV TVER
001: MVNATVARNI AGICGNVISL FLFLSPIPTF ITIYKKKKVE EYKADPYLAT VLNCALWVFY GLPMVQPDSL LVITINGTGL AIELVYLAIF FFFSPTSRKV
101: KVGLWLIGEM VFVGIVATCT LLLFHTHNQR SSFVGIFCVI FVSLMYIAPL TIMSKVIKTK SVKYMPFSLS LANFLNGVVW VIYALIKFDL FILIGNGLGT
201: VSGAVQLILY ACYYKTTPKD DEDEEDEENL SKVNSQLQLS GNSGQAKRVS A
101: KVGLWLIGEM VFVGIVATCT LLLFHTHNQR SSFVGIFCVI FVSLMYIAPL TIMSKVIKTK SVKYMPFSLS LANFLNGVVW VIYALIKFDL FILIGNGLGT
201: VSGAVQLILY ACYYKTTPKD DEDEEDEENL SKVNSQLQLS GNSGQAKRVS A
Arabidopsis Description
SWEET4Bidirectional sugar transporter SWEET4 [Source:UniProtKB/Swiss-Prot;Acc:Q944M5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.