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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, golgi

Predictor Summary:
  • plastid 1
  • golgi 2
  • plasma membrane 2
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, golgi
Any Predictor:plastid, secretory
BaCelLo:plastid
MultiLoc:golgi
Plant-mPloc:plasma membrane
PProwler:secretory
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
Os02t0513100-01 plasma membrane
Os08t0535200-01 plasma membrane
Os09t0508250-00 plasma membrane
Os11t0508600-01 plasma membrane
Os12t0476200-01 plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48740.1 Os02t0513100-01 AT3G48740.1 24027245
AT3G48740.1 Os08t0535200-01 AT3G48740.1 24027245
AT3G48740.1 Os09t0508250-00 AT3G48740.1 24027245
AT3G48740.1 Os11t0508600-01 AT3G48740.1 24027245
AT3G48740.1 Os12t0476200-01 AT3G48740.1 24027245
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH63814 Soybean extracellular 26.86 48.45
Zm00001d021064_P001 Maize plasma membrane 68.57 41.52
OQU89754 Sorghum plastid 64.57 41.39
TraesCS5A01G289200.1 Wheat plasma membrane 63.43 38.68
TraesCS5D01G297100.1 Wheat plasma membrane 62.29 37.98
TraesCS5B01G288600.1 Wheat plasma membrane 61.71 37.63
HORVU5Hr1G076770.1 Barley golgi, plasma membrane 66.29 36.14
PGSC0003DMT400082699 Potato extracellular, plasma membrane 25.14 33.85
Os08t0535200-01 Rice golgi, plasma membrane, plastid 57.14 32.57
CDY69440 Canola plasma membrane 38.29 31.31
GSMUA_AchrUn_... Banana golgi, plasma membrane 46.29 28.72
PGSC0003DMT400011081 Potato plasma membrane 41.14 28.46
GSMUA_Achr8P09230_001 Banana golgi, plasma membrane 45.14 28.11
KRH01827 Soybean golgi, plasma membrane 41.71 27.24
KRH59785 Soybean endoplasmic reticulum, plasma membrane 40.0 27.24
KRH41097 Soybean golgi, plasma membrane 39.43 27.17
KRH63811 Soybean plasma membrane 39.43 26.74
KRH01828 Soybean plasma membrane 41.14 26.57
KRH54140 Soybean plasma membrane 39.43 26.54
Solyc03g097620.1.1 Tomato plasma membrane 41.71 26.45
KRH46857 Soybean golgi, plasma membrane 41.14 26.37
VIT_17s0000g00830.t01 Wine grape plasma membrane 40.0 25.93
KRH54141 Soybean plasma membrane 37.71 25.58
KRH46856 Soybean plasma membrane 39.43 25.37
PGSC0003DMT400011076 Potato golgi, mitochondrion, plasma membrane, plastid 28.57 25.13
Os12t0476200-01 Rice extracellular, golgi 42.29 25.0
CDX84877 Canola golgi, plasma membrane 38.29 24.63
Bra012412.1-P Field mustard plasma membrane 24.57 24.57
CDY25828 Canola mitochondrion, plasma membrane 24.57 24.57
Bra013854.1-P Field mustard golgi, plasma membrane 38.29 24.54
CDY03395 Canola endoplasmic reticulum, golgi, plasma membrane 38.29 24.54
CDY34333 Canola golgi, plasma membrane 38.29 24.54
KRH10466 Soybean golgi, plasma membrane 34.86 24.5
Os09t0256650-00 Rice extracellular 13.71 24.49
KRH63812 Soybean endoplasmic reticulum, golgi, plasma membrane 39.43 24.47
AT5G13170.1 Thale cress plasma membrane 40.57 24.32
Solyc06g072630.2.1 Tomato plasma membrane 40.0 24.22
Bra019560.1-P Field mustard plasma membrane 39.43 24.21
CDX77928 Canola plasma membrane 39.43 24.21
CDX69663 Canola golgi, plasma membrane 41.14 24.16
CDX97233 Canola golgi, plasma membrane 41.14 24.16
Os11t0508600-01 Rice golgi, plasma membrane 41.71 24.09
Solyc06g072620.2.1 Tomato golgi, plasma membrane 39.43 24.04
CDY24854 Canola golgi, plasma membrane 37.14 23.99
GSMUA_Achr8P00620_001 Banana plasma membrane, vacuole 48.0 23.93
Bra010477.1-P Field mustard golgi, plasma membrane 37.14 23.9
Bra018039.1-P Field mustard plasma membrane 39.43 23.88
CDY05867 Canola plasma membrane 39.43 23.88
CDY08093 Canola plasma membrane 39.43 23.88
Os02t0513100-01 Rice golgi, plasma membrane, plastid 43.43 23.82
CDX83046 Canola plasma membrane 38.86 23.78
PGSC0003DMT400081212 Potato golgi, plasma membrane 38.86 23.78
Solyc03g097610.2.1 Tomato golgi, plasma membrane 38.29 23.76
GSMUA_AchrUn_... Banana plasma membrane 34.29 23.72
VIT_17s0000g00820.t01 Wine grape plasma membrane 36.0 23.68
PGSC0003DMT400081210 Potato golgi, plasma membrane 40.0 23.65
KRH54137 Soybean plasma membrane 41.71 23.62
AT3G48740.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 38.86 23.53
AT5G50800.1 Thale cress plasma membrane 39.43 23.47
Bra026487.1-P Field mustard endoplasmic reticulum, plasma membrane 37.14 23.47
CDX87161 Canola endoplasmic reticulum 37.14 23.47
CDY16863 Canola endoplasmic reticulum, plasma membrane 37.14 23.47
Bra029914.1-P Field mustard plasma membrane 38.86 23.45
CDX92666 Canola golgi, plasma membrane 36.57 23.44
CDY11047 Canola golgi, plasma membrane 36.57 23.44
CDX68492 Canola plasma membrane 38.29 23.43
KRH42232 Soybean endoplasmic reticulum, plasma membrane 36.57 23.36
Solyc03g097870.2.1 Tomato golgi, plasma membrane 40.0 23.33
Bra023394.1-P Field mustard plasma membrane 39.43 23.23
CDX85668 Canola endoplasmic reticulum, golgi, plasma membrane 39.43 23.23
CDX91144 Canola plasma membrane 39.43 23.23
Bra022761.1-P Field mustard golgi, plasma membrane 38.29 23.18
CDY53626 Canola plasma membrane 38.29 23.02
Os03t0347500-01 Rice golgi, plasma membrane 39.43 23.0
PGSC0003DMT400083992 Potato golgi, plasma membrane 39.43 23.0
CDX78511 Canola plasma membrane 38.29 22.95
Solyc03g097580.2.1 Tomato golgi, plasma membrane 39.43 22.85
Solyc03g097590.2.1 Tomato golgi, plasma membrane 38.86 22.82
AT4G25010.1 Thale cress plasma membrane 36.57 22.78
Solyc03g097600.2.1 Tomato golgi, plasma membrane 38.29 22.64
KRH58347 Soybean golgi, plasma membrane 36.57 22.61
Bra040489.1-P Field mustard golgi, plasma membrane 37.71 22.45
CDY05819 Canola golgi, plasma membrane 37.71 22.45
KRH41096 Soybean golgi, plasma membrane 37.71 22.45
CDX71659 Canola golgi, plasma membrane 37.71 22.37
PGSC0003DMT400081211 Potato golgi, plasma membrane 37.71 22.3
AT5G23660.1 Thale cress plasma membrane 36.0 22.11
Solyc03g097560.2.1 Tomato golgi, plasma membrane 37.14 22.03
PGSC0003DMT400081206 Potato golgi, plasma membrane 36.57 21.84
KRH43976 Soybean golgi, plasma membrane, plastid 34.86 21.79
Solyc03g097570.2.1 Tomato cytosol, golgi, plasma membrane 37.71 21.71
Bra009700.1-P Field mustard plasma membrane 35.43 21.53
CDX80379 Canola plasma membrane 35.43 21.53
CDX88041 Canola plasma membrane 35.43 21.53
CDY08964 Canola plastid 35.43 21.53
AT5G50790.1 Thale cress plasma membrane 35.43 21.45
GSMUA_Achr11P... Banana plasma membrane, vacuole 40.0 21.02
Bra006185.1-P Field mustard golgi, plasma membrane, plastid 37.71 20.89
Solyc05g024260.2.1 Tomato plasma membrane 34.86 20.68
Bra019197.1-P Field mustard plasma membrane 26.86 19.75
VIT_01s0146g00260.t01 Wine grape golgi, plasma membrane 26.29 19.57
Os01t0700100-01 Rice endoplasmic reticulum, plasma membrane, vacuole 25.71 19.57
KRH59783 Soybean golgi, plasma membrane 26.29 19.49
Os05t0426000-01 Rice plasma membrane 28.57 19.16
Solyc06g072640.1.1 Tomato plasma membrane 30.86 19.15
Os02t0301100-01 Rice plasma membrane 28.0 18.92
Os01t0881300-02 Rice plasma membrane 29.14 18.68
Os01t0541800-01 Rice plasma membrane 25.14 18.11
Os05t0588500-01 Rice golgi, plasma membrane, vacuole 24.0 17.72
Os09t0258700-00 Rice plasma membrane 21.14 16.67
Os01t0605700-01 Rice golgi, plasma membrane, plastid 22.29 15.35
Bra008850.1-P Field mustard plasma membrane 18.29 15.31
Os01t0606000-00 Rice plasma membrane 22.29 15.06
Os05t0214300-00 Rice golgi, plasma membrane 22.29 15.0
Os12t0178500-00 Rice plasma membrane 14.86 12.44
Os03t0341300-01 Rice plasma membrane 15.43 10.63
PGSC0003DMT400021966 Potato mitochondrion 11.43 10.0
Os09t0254600-00 Rice plastid 12.57 8.53
Protein Annotations
EnsemblPlants:Os09t0508250-00EnsemblPlantsGene:Os09g0508250Gene3D:1.20.1280.290GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0008643GO:GO:0016020GO:GO:0016021InterPro:SWEET_sugar_transprPANTHER:PTHR10791PANTHER:PTHR10791:SF37
PFAM:PF03083ProteinID:BAT08883.1SEG:segTMHMM:TMhelixUniParc:UPI000393A5CBUniProt:A0A0P0XPA4
MapMan:24.2.6.1:::::
Description
Similar to MTN3. (Os09t0508250-00)
Coordinates
chr9:-:19696291..19698761
Molecular Weight (calculated)
19471.2 Da
IEP (calculated)
9.621
GRAVY (calculated)
0.678
Length
175 amino acids
Sequence
(BLAST)
001: IYKYLTKTEN FGETLCLPVG PEIFEPKFQT NGWCRPTFLR VYRKKSTEGF SSVPYVVALF SCTLWILYAM VKTNSSPLLT INAFGCVVEA AYIAVYLVYA
101: PRPARLRALT SFLLLNVAAF SLVVVVTVAA VAQPHRVRVL GSICLAFSMA VFVAPMSVIV RSSHLIDQLF SFKDI
Best Arabidopsis Sequence Match ( AT5G13170.1 )
(BLAST)
001: MGVMINHHFL AFIFGILGNV ISFLVFLAPV PTFYRIYKRK STESFQSLPY QVSLFSCMLW LYYALIKKDA FLLITINSFG CVVETLYIAM FFAYATREKR
101: ISAMKLFIAM NVAFFSLILM VTHFVVKTPP LQVSVLGWIC VAISVSVFAA PLMIVARVIK TKSVEYMPFT LSFFLTISAV MWFAYGLFLN DICIAIPNVV
201: GFVLGLLQMV LYLVYRNSNE KPEKINSSEQ QLKSIVVMSP LGVSEVHPVV TESVDPLSEA VHHEDLSKVT KVEEPSIENG KCYVEATRPE TV
Arabidopsis Description
SWEET15Bidirectional sugar transporter SWEET15 [Source:UniProtKB/Swiss-Prot;Acc:Q9FY94]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.