Subcellular Localization
min:
: max
Winner_takes_all: golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 1
- extracellular 4
- golgi 5
- plasma membrane 6
- endoplasmic reticulum 4
- vacuole 4
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
GSMUA_Achr10P... | plasma membrane |
GSMUA_Achr11P... | plasma membrane |
GSMUA_Achr3P18700_001 | plasma membrane |
GSMUA_Achr6P07950_001 | plasma membrane |
GSMUA_Achr6P23850_001 | plasma membrane |
GSMUA_Achr8P00620_001 | plasma membrane |
GSMUA_Achr8P09230_001 | plasma membrane |
GSMUA_AchrUn_... | plasma membrane |
GSMUA_AchrUn_... | plasma membrane |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr8P09230_001 | Banana | golgi, plasma membrane | 70.21 | 70.46 |
KRH63814 | Soybean | extracellular | 21.63 | 62.89 |
CDY69440 | Canola | plasma membrane | 42.91 | 56.54 |
GSMUA_Achr8P00620_001 | Banana | plasma membrane, vacuole | 68.44 | 54.99 |
KRH54140 | Soybean | plasma membrane | 49.65 | 53.85 |
VIT_17s0000g00830.t01 | Wine grape | plasma membrane | 51.06 | 53.33 |
KRH54141 | Soybean | plasma membrane | 48.58 | 53.1 |
KRH63811 | Soybean | plasma membrane | 47.87 | 52.33 |
GSMUA_Achr3P18700_001 | Banana | golgi, plasma membrane, plastid | 52.13 | 52.31 |
GSMUA_Achr6P23850_001 | Banana | golgi, plasma membrane | 50.71 | 52.0 |
KRH41097 | Soybean | golgi, plasma membrane | 46.81 | 51.97 |
PGSC0003DMT400082699 | Potato | extracellular, plasma membrane | 23.76 | 51.54 |
GSMUA_Achr6P07950_001 | Banana | golgi, plasma membrane | 52.13 | 51.04 |
KRH59785 | Soybean | endoplasmic reticulum, plasma membrane | 46.45 | 50.97 |
CDY24854 | Canola | golgi, plasma membrane | 48.94 | 50.92 |
Bra010477.1-P | Field mustard | golgi, plasma membrane | 48.94 | 50.74 |
KRH01827 | Soybean | golgi, plasma membrane | 47.87 | 50.37 |
OQU89754 | Sorghum | plastid | 48.23 | 49.82 |
KRH01828 | Soybean | plasma membrane | 47.87 | 49.82 |
CDX92666 | Canola | golgi, plasma membrane | 47.87 | 49.45 |
CDY11047 | Canola | golgi, plasma membrane | 47.87 | 49.45 |
KRH46857 | Soybean | golgi, plasma membrane | 47.87 | 49.45 |
KRH46856 | Soybean | plasma membrane | 47.16 | 48.9 |
Solyc06g072620.2.1 | Tomato | golgi, plasma membrane | 49.29 | 48.43 |
Bra013854.1-P | Field mustard | golgi, plasma membrane | 46.81 | 48.35 |
CDY03395 | Canola | endoplasmic reticulum, golgi, plasma membrane | 46.81 | 48.35 |
CDY34333 | Canola | golgi, plasma membrane | 46.81 | 48.35 |
KRH63812 | Soybean | endoplasmic reticulum, golgi, plasma membrane | 47.87 | 47.87 |
PGSC0003DMT400081210 | Potato | golgi, plasma membrane | 50.0 | 47.64 |
GSMUA_Achr3P08960_001 | Banana | plasma membrane | 43.97 | 47.51 |
Solyc03g097580.2.1 | Tomato | golgi, plasma membrane | 50.71 | 47.35 |
GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 55.67 | 47.15 |
KRH42232 | Soybean | endoplasmic reticulum, plasma membrane | 45.74 | 47.08 |
Zm00001d021064_P001 | Maize | plasma membrane | 48.23 | 47.06 |
AT4G25010.1 | Thale cress | plasma membrane | 46.81 | 46.98 |
KRH10466 | Soybean | golgi, plasma membrane | 41.13 | 46.59 |
Solyc03g097610.2.1 | Tomato | golgi, plasma membrane | 46.45 | 46.45 |
Solyc06g072630.2.1 | Tomato | plasma membrane | 47.52 | 46.37 |
Bra012412.1-P | Field mustard | plasma membrane | 28.72 | 46.29 |
Os09t0508250-00 | Rice | extracellular, golgi | 28.72 | 46.29 |
PGSC0003DMT400011076 | Potato | golgi, mitochondrion, plasma membrane, plastid | 32.62 | 46.23 |
Solyc03g097620.1.1 | Tomato | plasma membrane | 45.04 | 46.01 |
Solyc03g097870.2.1 | Tomato | golgi, plasma membrane | 48.94 | 46.0 |
TraesCS5B01G288600.1 | Wheat | plasma membrane | 46.81 | 45.99 |
TraesCS5D01G297100.1 | Wheat | plasma membrane | 46.81 | 45.99 |
Solyc03g097590.2.1 | Tomato | golgi, plasma membrane | 48.58 | 45.97 |
CDX84877 | Canola | golgi, plasma membrane | 44.33 | 45.96 |
Bra026487.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 45.04 | 45.85 |
PGSC0003DMT400081212 | Potato | golgi, plasma membrane | 46.45 | 45.8 |
Bra019197.1-P | Field mustard | plasma membrane | 38.65 | 45.8 |
CDY25828 | Canola | mitochondrion, plasma membrane | 28.37 | 45.71 |
TraesCS5A01G289200.1 | Wheat | plasma membrane | 46.45 | 45.64 |
PGSC0003DMT400011081 | Potato | plasma membrane | 40.78 | 45.45 |
PGSC0003DMT400083992 | Potato | golgi, plasma membrane | 48.23 | 45.33 |
PGSC0003DMT400081211 | Potato | golgi, plasma membrane | 47.52 | 45.27 |
Solyc03g097600.2.1 | Tomato | golgi, plasma membrane | 47.52 | 45.27 |
AT5G50800.1 | Thale cress | plasma membrane | 47.16 | 45.24 |
KRH58347 | Soybean | golgi, plasma membrane | 45.39 | 45.23 |
CDX87161 | Canola | endoplasmic reticulum | 44.33 | 45.13 |
CDY16863 | Canola | endoplasmic reticulum, plasma membrane | 44.33 | 45.13 |
PGSC0003DMT400081206 | Potato | golgi, plasma membrane | 46.81 | 45.05 |
AT5G23660.1 | Thale cress | plasma membrane | 45.39 | 44.91 |
CDY08964 | Canola | plastid | 45.74 | 44.79 |
Solyc03g097560.2.1 | Tomato | golgi, plasma membrane | 46.81 | 44.75 |
GSMUA_Achr10P... | Banana | plasma membrane | 52.48 | 44.31 |
Bra040489.1-P | Field mustard | golgi, plasma membrane | 46.1 | 44.22 |
CDY05819 | Canola | golgi, plasma membrane | 46.1 | 44.22 |
Bra019560.1-P | Field mustard | plasma membrane | 44.68 | 44.21 |
CDX77928 | Canola | plasma membrane | 44.68 | 44.21 |
CDX71659 | Canola | golgi, plasma membrane | 46.1 | 44.07 |
VIT_01s0146g00260.t01 | Wine grape | golgi, plasma membrane | 36.52 | 43.83 |
Bra009700.1-P | Field mustard | plasma membrane | 44.68 | 43.75 |
CDX88041 | Canola | plasma membrane | 44.68 | 43.75 |
AT3G48740.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 44.68 | 43.6 |
Solyc03g097570.2.1 | Tomato | cytosol, golgi, plasma membrane | 46.81 | 43.42 |
CDX80379 | Canola | plasma membrane | 44.33 | 43.4 |
Bra022761.1-P | Field mustard | golgi, plasma membrane | 44.33 | 43.25 |
VIT_17s0000g00820.t01 | Wine grape | plasma membrane | 40.78 | 43.23 |
Solyc05g024260.2.1 | Tomato | plasma membrane | 45.04 | 43.05 |
CDX68492 | Canola | plasma membrane | 43.62 | 43.01 |
CDX83046 | Canola | plasma membrane | 43.62 | 43.01 |
Bra018039.1-P | Field mustard | plasma membrane | 43.97 | 42.91 |
CDY05867 | Canola | plasma membrane | 43.97 | 42.91 |
CDY08093 | Canola | plasma membrane | 43.97 | 42.91 |
KRH43976 | Soybean | golgi, plasma membrane, plastid | 42.55 | 42.86 |
GSMUA_AchrUn_... | Banana | plasma membrane | 38.3 | 42.69 |
Bra029914.1-P | Field mustard | plasma membrane | 43.62 | 42.41 |
AT5G13170.1 | Thale cress | plasma membrane | 43.62 | 42.12 |
CDX78511 | Canola | plasma membrane | 43.62 | 42.12 |
CDX91144 | Canola | plasma membrane | 43.97 | 41.75 |
KRH54137 | Soybean | plasma membrane | 45.74 | 41.75 |
CDY53626 | Canola | plasma membrane | 42.91 | 41.58 |
AT5G50790.1 | Thale cress | plasma membrane | 42.55 | 41.52 |
Bra023394.1-P | Field mustard | plasma membrane | 43.62 | 41.41 |
CDX85668 | Canola | endoplasmic reticulum, golgi, plasma membrane | 43.62 | 41.41 |
CDX69663 | Canola | golgi, plasma membrane | 43.62 | 41.28 |
CDX97233 | Canola | golgi, plasma membrane | 43.62 | 41.28 |
HORVU5Hr1G076770.1 | Barley | golgi, plasma membrane | 46.81 | 41.12 |
Solyc06g072640.1.1 | Tomato | plasma membrane | 40.78 | 40.78 |
EES14183 | Sorghum | plastid | 44.33 | 40.45 |
Zm00001d031647_P001 | Maize | plasma membrane | 44.33 | 40.32 |
Os08t0535200-01 | Rice | golgi, plasma membrane, plastid | 43.62 | 40.07 |
HORVU7Hr1G054710.1 | Barley | plasma membrane | 42.91 | 39.93 |
KRH41096 | Soybean | golgi, plasma membrane | 41.49 | 39.8 |
GSMUA_Achr9P17640_001 | Banana | golgi, plasma membrane, vacuole | 38.65 | 39.78 |
TraesCS7A01G261100.1 | Wheat | plasma membrane | 42.2 | 39.27 |
GSMUA_Achr3P08120_001 | Banana | golgi, plasma membrane, vacuole | 28.37 | 39.22 |
TraesCS7B01G160000.1 | Wheat | plasma membrane | 42.2 | 38.89 |
TraesCS7D01G263100.1 | Wheat | plasma membrane | 42.2 | 38.89 |
KRH59783 | Soybean | golgi, plasma membrane | 30.85 | 36.86 |
GSMUA_Achr11P... | Banana | golgi, plasma membrane | 32.27 | 36.55 |
GSMUA_Achr5P01260_001 | Banana | golgi, plasma membrane | 32.62 | 35.8 |
Bra006185.1-P | Field mustard | golgi, plasma membrane, plastid | 38.3 | 34.18 |
GSMUA_Achr1P25290_001 | Banana | plasma membrane, plastid | 29.08 | 34.17 |
GSMUA_Achr8P10260_001 | Banana | plasma membrane | 29.08 | 33.74 |
PGSC0003DMT400021966 | Potato | mitochondrion | 23.76 | 33.5 |
GSMUA_Achr10P... | Banana | golgi, plasma membrane, plastid | 30.85 | 33.46 |
GSMUA_Achr10P... | Banana | extracellular, golgi, plasma membrane | 27.66 | 33.33 |
GSMUA_Achr6P09180_001 | Banana | plasma membrane | 26.95 | 32.34 |
Bra008850.1-P | Field mustard | plasma membrane | 23.4 | 31.58 |
GSMUA_Achr7P14690_001 | Banana | golgi, plasma membrane, plastid | 28.37 | 30.53 |
GSMUA_Achr1P12680_001 | Banana | nucleus | 29.43 | 30.07 |
GSMUA_Achr8P25010_001 | Banana | plastid | 26.24 | 29.37 |
GSMUA_Achr11P... | Banana | plasma membrane | 27.3 | 26.01 |
GSMUA_Achr4P09090_001 | Banana | plasma membrane | 26.95 | 25.33 |
GSMUA_Achr3P32170_001 | Banana | cytosol, peroxisome, plasma membrane | 25.18 | 21.13 |
Protein Annotations
Gene3D:1.20.1280.290 | MapMan:24.2.6.1 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008643 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSMUA_AchrUn_randomG01040_001 |
EnsemblPlants:GSMUA_AchrUn_randomP01040_001 | EnsemblPlants:GSMUA_AchrUn_randomT01040_001 | UniProt:M0U5B6 | PFAM:PF03083 | PANTHER:PTHR10791 | PANTHER:PTHR10791:SF22 |
InterPro:SWEET10 | InterPro:SWEET_sugar_transpr | TMHMM:TMhelix | UniParc:UPI0002951263 | SEG:seg | : |
Description
Putative Protein RUPTURED POLLEN GRAIN 1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG01040_001]
Coordinates
chrchrUn_random:+:3619841..3621344
Molecular Weight (calculated)
31637.0 Da
IEP (calculated)
7.820
GRAVY (calculated)
0.578
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLSLEQPL PFIFGILGNI ISFMVFLSPL PTFYRIYRKK STEGFQSVPY VVALSSCMLL IYYALVKTNA VLLITINSFG CFIETAYITI YLIYATKKAR
101: IFCIQIFVLL NVVAFAAIVL LTRLAFTGPD RVTVVGWICV GFSLCVFAAP LSIIRLVIRT KSVEFMPFYL SFFLTLNAIA WFGYGFFTKD LYVELPNVLG
201: FVFGVVQMVV YMLYKNNNNK KDAAVAAVPE HRVKIAELSS APASELQVSL EEKDQNKRSM EDSQDTDKNE TAYEEGHDIS AV
101: IFCIQIFVLL NVVAFAAIVL LTRLAFTGPD RVTVVGWICV GFSLCVFAAP LSIIRLVIRT KSVEFMPFYL SFFLTLNAIA WFGYGFFTKD LYVELPNVLG
201: FVFGVVQMVV YMLYKNNNNK KDAAVAAVPE HRVKIAELSS APASELQVSL EEKDQNKRSM EDSQDTDKNE TAYEEGHDIS AV
001: MGVMINHHFL AFIFGILGNV ISFLVFLAPV PTFYRIYKRK STESFQSLPY QVSLFSCMLW LYYALIKKDA FLLITINSFG CVVETLYIAM FFAYATREKR
101: ISAMKLFIAM NVAFFSLILM VTHFVVKTPP LQVSVLGWIC VAISVSVFAA PLMIVARVIK TKSVEYMPFT LSFFLTISAV MWFAYGLFLN DICIAIPNVV
201: GFVLGLLQMV LYLVYRNSNE KPEKINSSEQ QLKSIVVMSP LGVSEVHPVV TESVDPLSEA VHHEDLSKVT KVEEPSIENG KCYVEATRPE TV
101: ISAMKLFIAM NVAFFSLILM VTHFVVKTPP LQVSVLGWIC VAISVSVFAA PLMIVARVIK TKSVEYMPFT LSFFLTISAV MWFAYGLFLN DICIAIPNVV
201: GFVLGLLQMV LYLVYRNSNE KPEKINSSEQ QLKSIVVMSP LGVSEVHPVV TESVDPLSEA VHHEDLSKVT KVEEPSIENG KCYVEATRPE TV
Arabidopsis Description
SWEET15Bidirectional sugar transporter SWEET15 [Source:UniProtKB/Swiss-Prot;Acc:Q9FY94]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.