Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 6
- golgi 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P17640_001 | Banana | golgi, plasma membrane, vacuole | 67.05 | 63.87 |
| GSMUA_Achr3P18700_001 | Banana | golgi, plasma membrane, plastid | 49.81 | 46.26 |
| GSMUA_Achr6P23850_001 | Banana | golgi, plasma membrane | 48.66 | 46.18 |
| Os03t0347500-01 | Rice | golgi, plasma membrane | 52.11 | 45.33 |
| Zm00001d047487_P001 | Maize | plasma membrane | 48.66 | 45.04 |
| Zm00001d029135_P001 | Maize | golgi, plasma membrane | 51.34 | 44.82 |
| EER92278 | Sorghum | golgi, plasma membrane | 53.64 | 44.73 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane | 47.51 | 43.97 |
| VIT_07s0104g01340.t01 | Wine grape | golgi, plasma membrane | 46.36 | 43.84 |
| GSMUA_Achr6P07950_001 | Banana | golgi, plasma membrane | 48.28 | 43.75 |
| TraesCS4B01G182000.1 | Wheat | golgi, plasma membrane | 49.81 | 43.62 |
| GSMUA_Achr8P09230_001 | Banana | golgi, plasma membrane | 46.74 | 43.42 |
| TraesCS4D01G183800.1 | Wheat | plasma membrane | 50.57 | 42.44 |
| TraesCS4A01G122100.1 | Wheat | plasma membrane | 50.19 | 42.12 |
| HORVU3Hr1G013170.1 | Barley | golgi, plasma membrane | 50.19 | 41.72 |
| GSMUA_Achr3P08120_001 | Banana | golgi, plasma membrane, vacuole | 31.8 | 40.69 |
| Solyc09g074530.2.1 | Tomato | golgi, plasma membrane | 43.68 | 39.86 |
| PGSC0003DMT400029520 | Potato | golgi, plasma membrane | 43.68 | 39.72 |
| GSMUA_Achr10P... | Banana | plasma membrane | 47.89 | 37.43 |
| GSMUA_Achr8P10260_001 | Banana | plasma membrane | 34.48 | 37.04 |
| GSMUA_Achr8P00620_001 | Banana | plasma membrane, vacuole | 48.28 | 35.9 |
| GSMUA_Achr6P09180_001 | Banana | plasma membrane | 31.8 | 35.32 |
| GSMUA_Achr11P... | Banana | golgi, plasma membrane | 32.57 | 34.14 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 31.8 | 32.81 |
| GSMUA_Achr5P01260_001 | Banana | golgi, plasma membrane | 32.18 | 32.68 |
| GSMUA_Achr10P... | Banana | extracellular, golgi, plasma membrane | 29.12 | 32.48 |
| GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 40.61 | 31.83 |
| GSMUA_Achr10P... | Banana | golgi, plasma membrane, plastid | 29.12 | 29.23 |
| GSMUA_Achr7P14690_001 | Banana | golgi, plasma membrane, plastid | 28.35 | 28.24 |
| GSMUA_Achr1P25290_001 | Banana | plasma membrane, plastid | 25.67 | 27.92 |
| GSMUA_Achr11P... | Banana | plasma membrane | 31.03 | 27.36 |
| GSMUA_Achr8P25010_001 | Banana | plastid | 25.67 | 26.59 |
| GSMUA_Achr1P12680_001 | Banana | nucleus | 26.44 | 25.0 |
| GSMUA_Achr4P09090_001 | Banana | plasma membrane | 26.05 | 22.67 |
| GSMUA_Achr3P32170_001 | Banana | cytosol, peroxisome, plasma membrane | 26.44 | 20.54 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P08960_001 | EnsemblPlants:GSMUA_Achr3T08960_001 | EnsemblPlantsGene:GSMUA_Achr3G08960_001 | Gene3D:1.20.1280.290 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008643 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:SWEET10 | InterPro:SWEET_sugar_transpr | PANTHER:PTHR10791 | PANTHER:PTHR10791:SF22 | PFAM:PF03083 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0002953FB4 | UniProt:M0SD13 | MapMan:24.2.6.1 | : | : |
Description
Putative Protein RUPTURED POLLEN GRAIN 1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G08960_001]
Coordinates
chr3:+:6460212..6462142
Molecular Weight (calculated)
29041.5 Da
IEP (calculated)
9.552
GRAVY (calculated)
0.839
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKGMTFFFC FCSPSTGNII SFLVVLAPVP TFYRIYKKKS TESFDSVPYV VALFSAMLWV FYGLLTLDVL LLTINTGACI IEMIYLTIYL IYASKKPRAF
101: TLKLISLVNV GIYGSLVLFT TLFVKGKRRI DVTGWICASF AVSVFAAPLS IIRLVIRTKS VEYMPFSLSF FLTLSAVAWF SYGILLGDLF VALPNVVGFM
201: FGIAQIIIYF MYVNSKKAET KPKLNAEAMP AAATLDSVVE LPEKKGVPQP VVCEFTSVIE V
101: TLKLISLVNV GIYGSLVLFT TLFVKGKRRI DVTGWICASF AVSVFAAPLS IIRLVIRTKS VEYMPFSLSF FLTLSAVAWF SYGILLGDLF VALPNVVGFM
201: FGIAQIIIYF MYVNSKKAET KPKLNAEAMP AAATLDSVVE LPEKKGVPQP VVCEFTSVIE V
001: MSLFNTENTW AFVFGLLGNL ISFAVFLSPV PTFYRIWKKK TTEGFQSIPY VVALFSATLW LYYATQKKDV FLLVTINAFG CFIETIYISM FLAYAPKPAR
101: MLTVKMLLLM NFGGFCAILL LCQFLVKGAT RAKIIGGICV GFSVCVFAAP LSIIRTVIKT RSVEYMPFSL SLTLTISAVI WLLYGLALKD IYVAFPNVLG
201: FALGALQMIL YVVYKYCKTS PHLGEKEVEA AKLPEVSLDM LKLGTVSSPE PISVVRQANK CTCGNDRRAE IEDGQTPKHG KQSSSAAAT
101: MLTVKMLLLM NFGGFCAILL LCQFLVKGAT RAKIIGGICV GFSVCVFAAP LSIIRTVIKT RSVEYMPFSL SLTLTISAVI WLLYGLALKD IYVAFPNVLG
201: FALGALQMIL YVVYKYCKTS PHLGEKEVEA AKLPEVSLDM LKLGTVSSPE PISVVRQANK CTCGNDRRAE IEDGQTPKHG KQSSSAAAT
Arabidopsis Description
SWEET11Bidirectional sugar transporter SWEET11 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMM5]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.