Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g074530.2.1 | Tomato | golgi, plasma membrane | 95.82 | 96.15 |
| VIT_07s0104g01340.t01 | Wine grape | golgi, plasma membrane | 57.49 | 59.78 |
| PGSC0003DMT400082699 | Potato | extracellular, plasma membrane | 21.6 | 47.69 |
| PGSC0003DMT400081212 | Potato | golgi, plasma membrane | 46.69 | 46.85 |
| PGSC0003DMT400081206 | Potato | golgi, plasma membrane | 47.04 | 46.08 |
| PGSC0003DMT400011076 | Potato | golgi, mitochondrion, plasma membrane, plastid | 31.71 | 45.73 |
| PGSC0003DMT400011081 | Potato | plasma membrane | 40.07 | 45.45 |
| PGSC0003DMT400083992 | Potato | golgi, plasma membrane | 47.04 | 45.0 |
| PGSC0003DMT400081210 | Potato | golgi, plasma membrane | 46.34 | 44.93 |
| PGSC0003DMT400081211 | Potato | golgi, plasma membrane | 45.99 | 44.59 |
| GSMUA_Achr3P08960_001 | Banana | plasma membrane | 39.72 | 43.68 |
| Zm00001d047487_P001 | Maize | plasma membrane | 41.46 | 42.2 |
| Zm00001d029135_P001 | Maize | golgi, plasma membrane | 40.77 | 39.13 |
| EER92278 | Sorghum | golgi, plasma membrane | 42.51 | 38.98 |
| TraesCS4D01G183800.1 | Wheat | plasma membrane | 42.16 | 38.91 |
| Os03t0347500-01 | Rice | golgi, plasma membrane | 40.42 | 38.67 |
| TraesCS4B01G182000.1 | Wheat | golgi, plasma membrane | 40.07 | 38.59 |
| TraesCS4A01G122100.1 | Wheat | plasma membrane | 41.46 | 38.26 |
| GSMUA_Achr9P17640_001 | Banana | golgi, plasma membrane, vacuole | 36.24 | 37.96 |
| HORVU3Hr1G013170.1 | Barley | golgi, plasma membrane | 41.12 | 37.58 |
| PGSC0003DMT400035874 | Potato | golgi, plasma membrane | 25.44 | 36.68 |
| PGSC0003DMT400095936 | Potato | golgi, plasma membrane | 29.62 | 36.48 |
| PGSC0003DMT400018642 | Potato | extracellular | 27.18 | 33.62 |
| PGSC0003DMT400063855 | Potato | plasma membrane | 29.27 | 33.2 |
| PGSC0003DMT400031634 | Potato | golgi, plasma membrane | 22.3 | 33.16 |
| PGSC0003DMT400035873 | Potato | plasma membrane | 29.27 | 32.81 |
| PGSC0003DMT400069697 | Potato | cytosol, golgi, plasma membrane | 26.83 | 32.35 |
| PGSC0003DMT400063714 | Potato | plasma membrane | 26.13 | 31.65 |
| PGSC0003DMT400063850 | Potato | plasma membrane | 31.01 | 31.56 |
| PGSC0003DMT400018258 | Potato | plasma membrane | 22.3 | 31.53 |
| PGSC0003DMT400021966 | Potato | mitochondrion | 21.95 | 31.5 |
| PGSC0003DMT400093003 | Potato | golgi, plasma membrane | 16.38 | 30.92 |
| PGSC0003DMT400063717 | Potato | golgi, plasma membrane | 29.97 | 29.55 |
| PGSC0003DMT400023436 | Potato | golgi, plasma membrane | 16.03 | 29.3 |
| PGSC0003DMT400001425 | Potato | golgi, plasma membrane | 18.47 | 29.28 |
Protein Annotations
| Gene3D:1.20.1280.290 | EntrezGene:102582684 | MapMan:24.2.6.1 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008643 | GO:GO:0016020 | GO:GO:0016021 |
| EMBL:KU686984 | UniProt:M1ASY4 | PFAM:PF03083 | EnsemblPlantsGene:PGSC0003DMG400011354 | PGSC:PGSC0003DMG400011354 | EnsemblPlants:PGSC0003DMT400029520 |
| PANTHER:PTHR10791 | PANTHER:PTHR10791:SF52 | InterPro:SWEET_sugar_transpr | TMHMM:TMhelix | UniParc:UPI00029552E3 | RefSeq:XP_006359431.2 |
| SEG:seg | : | : | : | : | : |
Description
NEC1 [Source:PGSC_GENE;Acc:PGSC0003DMG400011354]
Coordinates
chr9:+:52008374..52010097
Molecular Weight (calculated)
32629.4 Da
IEP (calculated)
8.852
GRAVY (calculated)
0.451
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLFTTIQLA FAFGILGNGV SFLVYLSPLP TFYRIFKRKS TEGFQSIPYS VSLFSAMLYL YYAYLKKNEI LLITINSFGT GIQLIYLTIF MIYATKSAKI
101: FATNLLIGFN IVAFGAIVGL TYIFAKENEL RISIVGWICA VFSVSVFAAP LSIMRRVIQT KSVEFMPFPL SFFLTICAVM WFFYGLLKKD MYIAMPNILG
201: FSFGIAQMIL YAIYRNRKQQ VLPDLSLMDL KEIAIDMKAV VVEIIQENVD DENKNKNKNK QEEVDSVDEK KDDNDKQDVV ALTTSNV
101: FATNLLIGFN IVAFGAIVGL TYIFAKENEL RISIVGWICA VFSVSVFAAP LSIMRRVIQT KSVEFMPFPL SFFLTICAVM WFFYGLLKKD MYIAMPNILG
201: FSFGIAQMIL YAIYRNRKQQ VLPDLSLMDL KEIAIDMKAV VVEIIQENVD DENKNKNKNK QEEVDSVDEK KDDNDKQDVV ALTTSNV
001: MGVMINHHFL AFIFGILGNV ISFLVFLAPV PTFYRIYKRK STESFQSLPY QVSLFSCMLW LYYALIKKDA FLLITINSFG CVVETLYIAM FFAYATREKR
101: ISAMKLFIAM NVAFFSLILM VTHFVVKTPP LQVSVLGWIC VAISVSVFAA PLMIVARVIK TKSVEYMPFT LSFFLTISAV MWFAYGLFLN DICIAIPNVV
201: GFVLGLLQMV LYLVYRNSNE KPEKINSSEQ QLKSIVVMSP LGVSEVHPVV TESVDPLSEA VHHEDLSKVT KVEEPSIENG KCYVEATRPE TV
101: ISAMKLFIAM NVAFFSLILM VTHFVVKTPP LQVSVLGWIC VAISVSVFAA PLMIVARVIK TKSVEYMPFT LSFFLTISAV MWFAYGLFLN DICIAIPNVV
201: GFVLGLLQMV LYLVYRNSNE KPEKINSSEQ QLKSIVVMSP LGVSEVHPVV TESVDPLSEA VHHEDLSKVT KVEEPSIENG KCYVEATRPE TV
Arabidopsis Description
SWEET15Bidirectional sugar transporter SWEET15 [Source:UniProtKB/Swiss-Prot;Acc:Q9FY94]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.