Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- golgi 2
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400035873 | endoplasmic reticulum |
| PGSC0003DMT400035874 | endoplasmic reticulum |
| PGSC0003DMT400063850 | endoplasmic reticulum |
| PGSC0003DMT400063855 | endoplasmic reticulum |
| PGSC0003DMT400095936 | endoplasmic reticulum |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400095936 | Potato | golgi, plasma membrane | 74.87 | 63.95 |
| PGSC0003DMT400035873 | Potato | plasma membrane | 74.37 | 57.81 |
| Bra016421.1-P | Field mustard | golgi, plasma membrane | 60.3 | 47.81 |
| CDX96591 | Canola | golgi, plasma membrane | 60.3 | 47.81 |
| CDY67972 | Canola | golgi, plasma membrane | 60.3 | 47.81 |
| Bra017916.1-P | Field mustard | extracellular, golgi | 58.79 | 47.56 |
| CDY04628 | Canola | extracellular, golgi | 58.79 | 47.56 |
| CDY50241 | Canola | extracellular, golgi, plasma membrane | 58.79 | 47.56 |
| AT1G21460.1 | Thale cress | extracellular, golgi, plasma membrane | 57.79 | 46.56 |
| VIT_18s0001g15330.t01 | Wine grape | golgi, plasma membrane | 57.79 | 46.37 |
| PGSC0003DMT400063855 | Potato | plasma membrane | 57.79 | 45.45 |
| KRH64557 | Soybean | extracellular, golgi | 56.28 | 45.34 |
| KRH15935 | Soybean | plasma membrane | 56.78 | 44.49 |
| KRH18105 | Soybean | plasma membrane | 54.27 | 43.55 |
| KRH53378 | Soybean | golgi, plasma membrane | 55.78 | 43.02 |
| Zm00001d038226_P001 | Maize | golgi, plasma membrane, vacuole | 53.77 | 42.8 |
| TraesCS3D01G403300.1 | Wheat | plasma membrane | 56.28 | 41.64 |
| GSMUA_Achr5P01260_001 | Banana | golgi, plasma membrane | 53.77 | 41.63 |
| TraesCS1A01G265200.1 | Wheat | golgi, plasma membrane, vacuole | 54.77 | 41.6 |
| EES19554 | Sorghum | golgi, plasma membrane | 53.27 | 41.41 |
| TraesCS1B01G276000.1 | Wheat | golgi, plasma membrane, vacuole | 54.27 | 41.38 |
| GSMUA_Achr11P... | Banana | golgi, plasma membrane | 51.76 | 41.37 |
| TraesCS3A01G408200.1 | Wheat | golgi, plasma membrane | 56.28 | 41.33 |
| KXG33819 | Sorghum | extracellular, golgi | 55.78 | 41.26 |
| TraesCS1D01G265400.1 | Wheat | golgi, plasma membrane, vacuole | 53.77 | 41.0 |
| Os05t0426000-01 | Rice | plasma membrane | 53.27 | 40.61 |
| TraesCS3B01G441800.1 | Wheat | golgi, plasma membrane | 55.78 | 40.51 |
| Zm00001d000222_P001 | Maize | plasma membrane | 53.27 | 39.7 |
| Os01t0881300-02 | Rice | plasma membrane | 54.27 | 39.56 |
| PGSC0003DMT400063850 | Potato | plasma membrane | 55.28 | 39.01 |
| PGSC0003DMT400018258 | Potato | plasma membrane | 39.2 | 38.42 |
| PGSC0003DMT400018642 | Potato | extracellular | 44.22 | 37.93 |
| HORVU3Hr1G091230.10 | Barley | plasma membrane | 49.25 | 33.56 |
| PGSC0003DMT400069697 | Potato | cytosol, golgi, plasma membrane | 39.2 | 32.77 |
| PGSC0003DMT400011076 | Potato | golgi, mitochondrion, plasma membrane, plastid | 31.66 | 31.66 |
| PGSC0003DMT400031634 | Potato | golgi, plasma membrane | 30.15 | 31.09 |
| PGSC0003DMT400063714 | Potato | plasma membrane | 36.18 | 30.38 |
| PGSC0003DMT400093003 | Potato | golgi, plasma membrane | 23.12 | 30.26 |
| PGSC0003DMT400001425 | Potato | golgi, plasma membrane | 27.14 | 29.83 |
| PGSC0003DMT400011081 | Potato | plasma membrane | 35.68 | 28.06 |
| PGSC0003DMT400063717 | Potato | golgi, plasma membrane | 40.2 | 27.49 |
| PGSC0003DMT400023436 | Potato | golgi, plasma membrane | 21.61 | 27.39 |
| PGSC0003DMT400081212 | Potato | golgi, plasma membrane | 36.68 | 25.52 |
| PGSC0003DMT400029520 | Potato | golgi, plasma membrane | 36.68 | 25.44 |
| PGSC0003DMT400081206 | Potato | golgi, plasma membrane | 35.68 | 24.23 |
| PGSC0003DMT400083992 | Potato | golgi, plasma membrane | 36.18 | 24.0 |
| PGSC0003DMT400081211 | Potato | golgi, plasma membrane | 34.67 | 23.31 |
| PGSC0003DMT400081210 | Potato | golgi, plasma membrane | 34.67 | 23.31 |
| PGSC0003DMT400082699 | Potato | extracellular, plasma membrane | 14.57 | 22.31 |
| PGSC0003DMT400021966 | Potato | mitochondrion | 21.11 | 21.0 |
Protein Annotations
| Gene3D:1.20.1280.290 | MapMan:24.2.6.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008643 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0034219 | GO:GO:0051119 | UniProt:M1B2X8 | PFAM:PF03083 | EnsemblPlantsGene:PGSC0003DMG400013811 | PGSC:PGSC0003DMG400013811 |
| EnsemblPlants:PGSC0003DMT400035874 | PANTHER:PTHR10791 | PANTHER:PTHR10791:SF44 | InterPro:SWEET1 | InterPro:SWEET_sugar_transpr | TMHMM:TMhelix |
| UniParc:UPI000295158E | SEG:seg | : | : | : | : |
Description
Nodulin MtN3 family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400013811]
Coordinates
chr6:-:43578345..43579545
Molecular Weight (calculated)
22393.2 Da
IEP (calculated)
9.924
GRAVY (calculated)
0.853
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: TFKRIIKNKS TEQFSGIPYV MTLLNCLLTA WYGLPFITSN NILVATINGV GAAIELTYVF IFLLYGSNKQ KRKILVIFVL VLIAFATAAV ISISFFHGKN
101: RRFFCGMAAT IITVVMYASP LSNIRLVIRT KSVEYMPFFL SFAVVVSCTN WFIYGMLGMD LFIGISTCIG LILGVVQLIL YFIYREKKTS TAVDEFQYA
101: RRFFCGMAAT IITVVMYASP LSNIRLVIRT KSVEYMPFFL SFAVVVSCTN WFIYGMLGMD LFIGISTCIG LILGVVQLIL YFIYREKKTS TAVDEFQYA
001: MGDKLRLSIG ILGNGASLLL YTAPIVTFSR VFKKKSTEEF SCFPYVMTLF NCLIYTWYGL PIVSHLWENL PLVTINGVGI LLESIFIFIY FYYASPKEKI
101: KVGVTFVPVI VGFGLTTAIS ALVFDDHRHR KSFVGSVGLV ASISMYGSPL VVMKKVIETR SVEYMPFYLS FFSFLASSLW LAYGLLSHDL FLASPNMVAT
201: PLGILQLILY FKYKNKKDLA PTTMVITKRN DHDDKNKATL EFVVDVDRNS DTNEKNSNNA SSI
101: KVGVTFVPVI VGFGLTTAIS ALVFDDHRHR KSFVGSVGLV ASISMYGSPL VVMKKVIETR SVEYMPFYLS FFSFLASSLW LAYGLLSHDL FLASPNMVAT
201: PLGILQLILY FKYKNKKDLA PTTMVITKRN DHDDKNKATL EFVVDVDRNS DTNEKNSNNA SSI
Arabidopsis Description
SWEET3Bidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:A0A178U9N2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.