Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d000222_P001 | endoplasmic reticulum |
| Zm00001d038226_P001 | endoplasmic reticulum |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G21460.1 | Zm00001d000222_P001 | AT1G21460.1 | 24027245 |
| AT1G21460.1 | Zm00001d038226_P001 | AT1G21460.1 | 24027245 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19554 | Sorghum | golgi, plasma membrane | 93.6 | 91.41 |
| Os05t0426000-01 | Rice | plasma membrane | 80.4 | 77.01 |
| TraesCS1A01G265200.1 | Wheat | golgi, plasma membrane, vacuole | 78.0 | 74.43 |
| TraesCS1D01G265400.1 | Wheat | golgi, plasma membrane, vacuole | 77.2 | 73.95 |
| TraesCS1B01G276000.1 | Wheat | golgi, plasma membrane, vacuole | 76.8 | 73.56 |
| GSMUA_Achr11P... | Banana | golgi, plasma membrane | 65.2 | 65.46 |
| Zm00001d000222_P001 | Maize | plasma membrane | 69.6 | 65.17 |
| GSMUA_Achr5P01260_001 | Banana | golgi, plasma membrane | 64.0 | 62.26 |
| Bra016421.1-P | Field mustard | golgi, plasma membrane | 62.4 | 62.15 |
| CDX96591 | Canola | golgi, plasma membrane | 62.4 | 62.15 |
| AT1G21460.1 | Thale cress | extracellular, golgi, plasma membrane | 61.2 | 61.94 |
| CDY67972 | Canola | golgi, plasma membrane | 62.0 | 61.75 |
| CDY04628 | Canola | extracellular, golgi | 60.4 | 61.38 |
| Bra017916.1-P | Field mustard | extracellular, golgi | 60.0 | 60.98 |
| CDY50241 | Canola | extracellular, golgi, plasma membrane | 60.0 | 60.98 |
| KRH18105 | Soybean | plasma membrane | 59.6 | 60.08 |
| KRH15935 | Soybean | plasma membrane | 60.8 | 59.84 |
| VIT_18s0001g15330.t01 | Wine grape | golgi, plasma membrane | 59.2 | 59.68 |
| KRH64557 | Soybean | extracellular, golgi | 58.8 | 59.51 |
| Solyc04g064610.2.1 | Tomato | plasma membrane | 57.6 | 58.54 |
| Solyc04g064620.2.1 | Tomato | extracellular, golgi, plasma membrane | 56.8 | 57.96 |
| PGSC0003DMT400063855 | Potato | plasma membrane | 58.4 | 57.71 |
| KRH53378 | Soybean | golgi, plasma membrane | 59.2 | 57.36 |
| PGSC0003DMT400035874 | Potato | golgi, plasma membrane | 42.8 | 53.77 |
| PGSC0003DMT400063850 | Potato | plasma membrane | 58.0 | 51.42 |
| Solyc06g060580.1.1 | Tomato | golgi, plasma membrane | 51.6 | 51.39 |
| PGSC0003DMT400095936 | Potato | golgi, plasma membrane | 47.6 | 51.07 |
| Solyc06g060590.2.1 | Tomato | plasma membrane | 52.0 | 50.78 |
| PGSC0003DMT400035873 | Potato | plasma membrane | 52.0 | 50.78 |
| Solyc04g064640.2.1 | Tomato | endoplasmic reticulum, golgi | 49.2 | 50.41 |
| Solyc04g064630.2.1 | Tomato | golgi, plasma membrane | 47.6 | 47.6 |
| Zm00001d043735_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 42.4 | 46.09 |
| Zm00001d044421_P001 | Maize | plasma membrane | 42.8 | 43.85 |
| Zm00001d011299_P001 | Maize | plasma membrane | 41.2 | 42.39 |
| Zm00001d009071_P002 | Maize | plasma membrane | 38.0 | 39.75 |
| Zm00001d015905_P001 | Maize | plasma membrane | 40.0 | 39.68 |
| Zm00001d040656_P002 | Maize | golgi, plasma membrane, vacuole | 36.0 | 39.65 |
| Zm00001d015914_P005 | Maize | plasma membrane | 40.0 | 39.22 |
| Zm00001d015912_P001 | Maize | plasma membrane | 38.0 | 36.4 |
| Zm00001d010440_P001 | Maize | extracellular, golgi, plasma membrane | 30.8 | 32.35 |
| Zm00001d041067_P001 | Maize | plasma membrane | 37.2 | 31.53 |
| Zm00001d039347_P001 | Maize | endoplasmic reticulum, golgi, mitochondrion, plasma membrane | 33.2 | 31.32 |
| Zm00001d029098_P001 | Maize | golgi, plasma membrane, plastid, vacuole | 39.2 | 30.91 |
| Zm00001d050577_P001 | Maize | plasma membrane | 36.8 | 30.26 |
| Zm00001d049252_P001 | Maize | plasma membrane | 34.8 | 29.69 |
| Zm00001d023673_P001 | Maize | plasma membrane | 35.2 | 29.24 |
| Zm00001d023677_P001 | Maize | plasma membrane | 35.2 | 29.14 |
| Zm00001d021064_P001 | Maize | plasma membrane | 33.2 | 28.72 |
| Zm00001d031647_P001 | Maize | plasma membrane | 34.8 | 28.06 |
| Zm00001d047487_P001 | Maize | plasma membrane | 31.2 | 27.66 |
| Zm00001d016590_P001 | Maize | plasma membrane | 34.4 | 26.54 |
| Zm00001d029135_P001 | Maize | golgi, plasma membrane | 30.8 | 25.75 |
| Zm00001d007365_P001 | Maize | endoplasmic reticulum | 34.4 | 25.0 |
Protein Annotations
| EnsemblPlants:Zm00001d038226_P001 | EnsemblPlants:Zm00001d038226_T001 | EnsemblPlantsGene:Zm00001d038226 | Gene3D:1.20.1280.290 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008643 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:SWEET_sugar_transpr | PANTHER:PTHR10791 | PANTHER:PTHR10791:SF107 | PFAM:PF03083 | ProteinID:AQK86083.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0002215A2C | UniProt:A0A1D6M4M7 | MapMan:24.2.6.1 | : | : |
Description
sugars will eventually be exported transporter1b sugars will eventually be exported transporter1b
Coordinates
chr6:-:151988250..151991045
Molecular Weight (calculated)
26775.0 Da
IEP (calculated)
8.781
GRAVY (calculated)
0.590
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDVVKFVFG VSGNVIALFL FLSPVPTFWR IIRRKSTEDF SGVPYSMTLL NCLLSAWYGL PFVSPNNMLV STINGAGAAI EAVYVVIFLA FASSQRTRLR
101: MLGLASAVSA AFAAVALASM LALHGQGRKL MCGLAATVCS ICMYASPLSI MRLVVKTKSV EYMPFLLSLA VFLCGTSWFV YGLLGRDPFV AIPNGCGSFL
201: GAVQLVLYAI YRDSNSGGKQ QAGDDVEMAS DAKSSKKVAD DVGGKEDRLV
101: MLGLASAVSA AFAAVALASM LALHGQGRKL MCGLAATVCS ICMYASPLSI MRLVVKTKSV EYMPFLLSLA VFLCGTSWFV YGLLGRDPFV AIPNGCGSFL
201: GAVQLVLYAI YRDSNSGGKQ QAGDDVEMAS DAKSSKKVAD DVGGKEDRLV
001: MNIAHTIFGV FGNATALFLF LAPSITFKRI IKNKSTEQFS GIPYPMTLLN CLLSAWYGLP FVSKDNTLVS TINGTGAVIE TVYVLIFLFY APKKEKIKIF
101: GIFSCVLAVF ATVALVSLFA LQGNGRKLFC GLAATVFSII MYASPLSIMR LVVKTKSVEF MPFFLSLFVF LCGTSWFVYG LIGRDPFVAI PNGFGCALGT
201: LQLILYFIYC GNKGEKSADA QKDEKSVEMK DDEKKQNVVN GKQDLQV
101: GIFSCVLAVF ATVALVSLFA LQGNGRKLFC GLAATVFSII MYASPLSIMR LVVKTKSVEF MPFFLSLFVF LCGTSWFVYG LIGRDPFVAI PNGFGCALGT
201: LQLILYFIYC GNKGEKSADA QKDEKSVEMK DDEKKQNVVN GKQDLQV
Arabidopsis Description
SWEET1Bidirectional sugar transporter SWEET1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9J7]
SUBAcon: [plasma membrane,golgi,extracellular]
SUBAcon: [plasma membrane,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.