Factsheet for Solyc04g064630.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

plastid 3
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc04g064610.2.1	endoplasmic reticulum
Solyc04g064620.2.1	endoplasmic reticulum
Solyc04g064630.2.1	endoplasmic reticulum
Solyc04g064640.2.1	endoplasmic reticulum
Solyc06g060580.1.1	endoplasmic reticulum
Solyc06g060590.2.1	endoplasmic reticulum

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G21460.1	Solyc04g064610.2.1	AT1G21460.1	24027245
AT1G21460.1	Solyc04g064620.2.1	AT1G21460.1	24027245
AT1G21460.1	Solyc04g064630.2.1	AT1G21460.1	24027245
AT1G21460.1	Solyc04g064640.2.1	AT1G21460.1	24027245
AT1G21460.1	Solyc06g060580.1.1	AT1G21460.1	24027245
AT1G21460.1	Solyc06g060590.2.1	AT1G21460.1	24027245

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g064640.2.1	Tomato	endoplasmic reticulum, golgi	63.2	64.75
Solyc04g064620.2.1	Tomato	extracellular, golgi, plasma membrane	62.0	63.27
KRH15935	Soybean	plasma membrane	56.4	55.51
KRH18105	Soybean	plasma membrane	54.4	54.84
KRH64557	Soybean	extracellular, golgi	53.6	54.25
Solyc04g064610.2.1	Tomato	plasma membrane	52.0	52.85
KRH53378	Soybean	golgi, plasma membrane	54.0	52.33
CDY50241	Canola	extracellular, golgi, plasma membrane	50.8	51.63
CDY04628	Canola	extracellular, golgi	50.8	51.63
Bra017916.1-P	Field mustard	extracellular, golgi	50.8	51.63
CDY67972	Canola	golgi, plasma membrane	51.6	51.39
CDX96591	Canola	golgi, plasma membrane	51.6	51.39
Bra016421.1-P	Field mustard	golgi, plasma membrane	51.6	51.39
VIT_18s0001g15330.t01	Wine grape	golgi, plasma membrane	50.8	51.21
AT1G21460.1	Thale cress	extracellular, golgi, plasma membrane	50.0	50.61
GSMUA_Achr11P...	Banana	golgi, plasma membrane	50.0	50.2
Os01t0881300-02	Rice	plasma membrane	54.4	49.82
KXG33819	Sorghum	extracellular, golgi	52.8	49.07
Zm00001d000222_P001	Maize	plasma membrane	52.0	48.69
TraesCS3D01G403300.1	Wheat	plasma membrane	52.0	48.33
TraesCS1A01G265200.1	Wheat	golgi, plasma membrane, vacuole	50.0	47.71
EES19554	Sorghum	golgi, plasma membrane	48.8	47.66
TraesCS3A01G408200.1	Wheat	golgi, plasma membrane	51.6	47.6
Zm00001d038226_P001	Maize	golgi, plasma membrane, vacuole	47.6	47.6
TraesCS1B01G276000.1	Wheat	golgi, plasma membrane, vacuole	49.6	47.51
GSMUA_Achr5P01260_001	Banana	golgi, plasma membrane	48.8	47.47
TraesCS1D01G265400.1	Wheat	golgi, plasma membrane, vacuole	49.2	47.13
TraesCS3B01G441800.1	Wheat	golgi, plasma membrane	51.6	47.08
Os05t0426000-01	Rice	plasma membrane	48.0	45.98
Solyc06g060590.2.1	Tomato	plasma membrane	44.8	43.75
Solyc06g060580.1.1	Tomato	golgi, plasma membrane	43.6	43.43
Solyc02g071520.2.1	Tomato	plasma membrane	36.8	39.15
Solyc07g062120.2.1	Tomato	plasma membrane, plastid	36.4	38.72
Solyc03g005880.2.1	Tomato	plasma membrane	36.4	38.4
HORVU3Hr1G091230.10	Barley	plasma membrane	44.8	38.36
Solyc06g071400.2.1	Tomato	cytosol, golgi, plasma membrane	35.2	36.97
Solyc03g114200.2.1	Tomato	golgi, plasma membrane, plastid	34.4	36.44
Solyc03g007360.2.1	Tomato	golgi, plasma membrane	37.2	36.19
Solyc02g086920.1.1	Tomato	golgi, plasma membrane	33.2	35.62
Solyc12g055870.1.1	Tomato	golgi, plasma membrane	34.0	35.42
Solyc01g099870.1.1	Tomato	plasma membrane, vacuole	25.2	33.87
Solyc08g082770.2.1	Tomato	golgi, plasma membrane	32.8	32.67
Solyc03g097610.2.1	Tomato	golgi, plasma membrane	34.8	30.85
Solyc01g099880.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	36.0	30.72
Solyc03g097620.1.1	Tomato	plasma membrane	33.6	30.43
Solyc11g028270.1.1	Tomato	extracellular	21.2	29.61
Solyc06g072620.2.1	Tomato	golgi, plasma membrane	32.8	28.57
Solyc03g097580.2.1	Tomato	golgi, plasma membrane	34.4	28.48
Solyc03g097870.2.1	Tomato	golgi, plasma membrane	34.0	28.33
Solyc09g074530.2.1	Tomato	golgi, plasma membrane	32.4	28.32
Solyc03g097600.2.1	Tomato	golgi, plasma membrane	32.8	27.7
Solyc06g072630.2.1	Tomato	plasma membrane	31.2	26.99
Solyc03g097570.2.1	Tomato	cytosol, golgi, plasma membrane	32.8	26.97
Solyc03g097590.2.1	Tomato	golgi, plasma membrane	32.0	26.85
Solyc03g097560.2.1	Tomato	golgi, plasma membrane	31.2	26.44
Solyc05g024260.2.1	Tomato	plasma membrane	30.8	26.1
Solyc06g072640.1.1	Tomato	plasma membrane	28.0	24.82

Protein Annotations

Gene3D:1.20.1280.290	MapMan:24.2.6.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0008643	GO:GO:0016020	GO:GO:0016021
GO:GO:0034219	GO:GO:0051119	UniProt:K4BT54	PFAM:PF03083	PANTHER:PTHR10791	PANTHER:PTHR10791:SF44
InterPro:SWEET1	InterPro:SWEET_sugar_transpr	EnsemblPlantsGene:Solyc04g064630.2	EnsemblPlants:Solyc04g064630.2.1	TMHMM:TMhelix	UniParc:UPI0002766457
SEG:seg	:	:	:	:	:

Description

Bidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:K4BT54]

Coordinates

chr4:-:55801105..55804886

Molecular Weight (calculated)

28036.5 Da

IEP (calculated)

9.668

GRAVY (calculated)

0.744

Length

250 amino acids

Sequence
(BLAST)

001: MGHVHVIRIL HTTFGIFGNV FGILLFLAPM ITFKRIIMKR STEKFSGVPY LMSLFNCLFS AWYGLPFVSP NNTLLTVLAS IGGALEAIYV LIFLIFAPKK
101: EKFKISGILF LIISIFSIVA LVSVLTLHDN KRKLLCGLAF AITCIMMFGA PLTIMRQVIK SKSVEYMPFF LSLSIFNSST SWAIYGLLGK DLFIIVPNSI
201: GSLLACVQLI LYAIYRDSEK KLDVEMEGSI EKGLEKTQIE MQKNMETYAL

Best Arabidopsis Sequence Match ( AT5G53190.1 )
(BLAST)

001: MGDKLRLSIG ILGNGASLLL YTAPIVTFSR VFKKKSTEEF SCFPYVMTLF NCLIYTWYGL PIVSHLWENL PLVTINGVGI LLESIFIFIY FYYASPKEKI
101: KVGVTFVPVI VGFGLTTAIS ALVFDDHRHR KSFVGSVGLV ASISMYGSPL VVMKKVIETR SVEYMPFYLS FFSFLASSLW LAYGLLSHDL FLASPNMVAT
201: PLGILQLILY FKYKNKKDLA PTTMVITKRN DHDDKNKATL EFVVDVDRNS DTNEKNSNNA SSI

Arabidopsis Description

SWEET3Bidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:A0A178U9N2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.