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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
 plasma membrane: 23508561
mitochondrion: 27297264
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID: 23508561 doi
Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck
Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d000222_P001 endoplasmic reticulum
Zm00001d038226_P001 endoplasmic reticulum

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G21460.1 Zm00001d000222_P001 AT1G21460.1 24027245
AT1G21460.1 Zm00001d038226_P001 AT1G21460.1 24027245
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG33819 Sorghum extracellular, golgi 94.38 93.68
Os01t0881300-02 Rice plasma membrane 87.64 85.71
TraesCS3D01G403300.1 Wheat plasma membrane 82.4 81.78
TraesCS3A01G408200.1 Wheat golgi, plasma membrane 82.77 81.55
TraesCS3B01G441800.1 Wheat golgi, plasma membrane 83.52 81.39
Zm00001d038226_P001 Maize golgi, plasma membrane, vacuole 65.17 69.6
GSMUA_Achr11P... Banana golgi, plasma membrane 61.42 65.86
KRH64557 Soybean extracellular, golgi 60.3 65.18
GSMUA_Achr5P01260_001 Banana golgi, plasma membrane 61.8 64.2
KRH15935 Soybean plasma membrane 60.3 63.39
KRH18105 Soybean plasma membrane 58.43 62.9
Solyc04g064620.2.1 Tomato extracellular, golgi, plasma membrane 57.3 62.45
KRH53378 Soybean golgi, plasma membrane 60.3 62.4
CDY04628 Canola extracellular, golgi 56.93 61.79
VIT_18s0001g15330.t01 Wine grape golgi, plasma membrane 57.3 61.69
AT1G21460.1 Thale cress extracellular, golgi, plasma membrane 56.93 61.54
CDY50241 Canola extracellular, golgi, plasma membrane 56.55 61.38
Bra017916.1-P Field mustard extracellular, golgi 56.55 61.38
HORVU3Hr1G091230.10 Barley plasma membrane 65.92 60.27
Bra016421.1-P Field mustard golgi, plasma membrane 56.55 60.16
CDX96591 Canola golgi, plasma membrane 56.55 60.16
CDY67972 Canola golgi, plasma membrane 56.55 60.16
Solyc04g064610.2.1 Tomato plasma membrane 55.06 59.76
PGSC0003DMT400063855 Potato plasma membrane 56.18 59.29
PGSC0003DMT400063850 Potato plasma membrane 58.43 55.32
PGSC0003DMT400035874 Potato golgi, plasma membrane 39.7 53.27
Solyc04g064640.2.1 Tomato endoplasmic reticulum, golgi 47.57 52.05
Solyc04g064630.2.1 Tomato golgi, plasma membrane 48.69 52.0
PGSC0003DMT400095936 Potato golgi, plasma membrane 43.45 49.79
Solyc06g060590.2.1 Tomato plasma membrane 47.57 49.61
Solyc06g060580.1.1 Tomato golgi, plasma membrane 44.94 47.81
PGSC0003DMT400035873 Potato plasma membrane 45.69 47.66
Zm00001d011299_P001 Maize plasma membrane 40.82 44.86
Zm00001d044421_P001 Maize plasma membrane 40.07 43.85
Zm00001d043735_P001 Maize endoplasmic reticulum, plasma membrane, vacuole 36.7 42.61
Zm00001d009071_P002 Maize plasma membrane 35.21 39.33
Zm00001d015914_P005 Maize plasma membrane 37.45 39.22
Zm00001d040656_P002 Maize golgi, plasma membrane, vacuole 33.33 39.21
Zm00001d015905_P001 Maize plasma membrane 36.7 38.89
Zm00001d015912_P001 Maize plasma membrane 34.83 35.63
Zm00001d010440_P001 Maize extracellular, golgi, plasma membrane 31.46 35.29
Zm00001d039347_P001 Maize endoplasmic reticulum, golgi, mitochondrion, plasma membrane 32.96 33.21
Zm00001d050577_P001 Maize plasma membrane 36.33 31.91
Zm00001d021064_P001 Maize plasma membrane 33.33 30.8
Zm00001d049252_P001 Maize plasma membrane 33.33 30.38
Zm00001d041067_P001 Maize plasma membrane 33.33 30.17
Zm00001d029098_P001 Maize golgi, plasma membrane, plastid, vacuole 35.58 29.97
Zm00001d023673_P001 Maize plasma membrane 33.33 29.57
Zm00001d023677_P001 Maize plasma membrane 33.33 29.47
Zm00001d031647_P001 Maize plasma membrane 32.96 28.39
Zm00001d016590_P001 Maize plasma membrane 34.08 28.09
Zm00001d047487_P001 Maize plasma membrane 29.59 28.01
Zm00001d029135_P001 Maize golgi, plasma membrane 29.59 26.42
Zm00001d007365_P001 Maize endoplasmic reticulum 33.71 26.16
Protein Annotations
EMBL:BT039389EMBL:EU959703EnsemblPlants:Zm00001d000222_P001EnsemblPlants:Zm00001d000222_T001EnsemblPlantsGene:Zm00001d000222EntrezGene:100282137
Gene3D:1.20.1280.290GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0008643GO:GO:0016020
GO:GO:0016021InterPro:SWEET_sugar_transprPANTHER:PTHR10791PANTHER:PTHR10791:SF107PFAM:PF03083SEG:seg
TMHMM:TMhelixUniParc:UPI000160BA5EUniProt:B4FQK1MapMan:24.2.6.1::
Description
sugars will eventually be exported transporter1a sugars will eventually be exported transporter1a
Coordinates
chrB73V4_ctg26:+:144186..147832
Molecular Weight (calculated)
28633.6 Da
IEP (calculated)
9.422
GRAVY (calculated)
0.778
Length
267 amino acids
Sequence
(BLAST)
001: MEHIARFFFG VSGNVIALFL FLSPVVTFWR VIRKRSTEDF SGVPYNMTLL NCLLSAWYGL PFVSPNNILV STINGTGSVI EAIYVVIFLI FAVDRRARLS
101: MLGLLGIVAS IFTTVVLVSL LALHGNARKV FCGLAATIFS ICMYASPLSI MRLVIKTKSV EFMPFLLSLA VFLCGTSWFI YGLLGRDPFI IIPNGCGSFL
201: GLMQLILYAI YRKNKGPAAP AGKGEAAAAA AEVEDTKKVA AAVELADATT NKAADAVGGD GKVASQV
Best Arabidopsis Sequence Match ( AT1G21460.1 )
(BLAST)
001: MNIAHTIFGV FGNATALFLF LAPSITFKRI IKNKSTEQFS GIPYPMTLLN CLLSAWYGLP FVSKDNTLVS TINGTGAVIE TVYVLIFLFY APKKEKIKIF
101: GIFSCVLAVF ATVALVSLFA LQGNGRKLFC GLAATVFSII MYASPLSIMR LVVKTKSVEF MPFFLSLFVF LCGTSWFVYG LIGRDPFVAI PNGFGCALGT
201: LQLILYFIYC GNKGEKSADA QKDEKSVEMK DDEKKQNVVN GKQDLQV
Arabidopsis Description
SWEET1Bidirectional sugar transporter SWEET1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9J7]
SUBAcon: [plasma membrane,golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.