Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 4
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G21460.1 | CDX96591 | AT1G21460.1 | 24027245 |
| AT1G21460.1 | CDY04628 | AT1G21460.1 | 24027245 |
| AT1G21460.1 | CDY50241 | AT1G21460.1 | 24027245 |
| AT1G21460.1 | CDY67972 | AT1G21460.1 | 24027245 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017916.1-P | Field mustard | extracellular, golgi | 99.19 | 99.19 |
| CDY04628 | Canola | extracellular, golgi | 98.37 | 98.37 |
| CDX96591 | Canola | golgi, plasma membrane | 93.5 | 91.63 |
| CDY67972 | Canola | golgi, plasma membrane | 93.5 | 91.63 |
| AT1G21460.1 | Thale cress | extracellular, golgi, plasma membrane | 91.46 | 91.09 |
| KRH64557 | Soybean | extracellular, golgi | 71.95 | 71.66 |
| VIT_18s0001g15330.t01 | Wine grape | golgi, plasma membrane | 71.95 | 71.37 |
| Solyc04g064610.2.1 | Tomato | plasma membrane | 69.92 | 69.92 |
| Solyc04g064620.2.1 | Tomato | extracellular, golgi, plasma membrane | 68.7 | 68.98 |
| PGSC0003DMT400063855 | Potato | plasma membrane | 70.73 | 68.77 |
| KRH53378 | Soybean | golgi, plasma membrane | 71.95 | 68.6 |
| KRH18105 | Soybean | plasma membrane | 68.7 | 68.15 |
| KRH15935 | Soybean | plasma membrane | 69.92 | 67.72 |
| GSMUA_Achr11P... | Banana | golgi, plasma membrane | 62.6 | 61.85 |
| TraesCS1B01G276000.1 | Wheat | golgi, plasma membrane, vacuole | 64.63 | 60.92 |
| TraesCS1D01G265400.1 | Wheat | golgi, plasma membrane, vacuole | 64.23 | 60.54 |
| TraesCS1A01G265200.1 | Wheat | golgi, plasma membrane, vacuole | 64.23 | 60.31 |
| Os05t0426000-01 | Rice | plasma membrane | 63.82 | 60.15 |
| Zm00001d038226_P001 | Maize | golgi, plasma membrane, vacuole | 60.98 | 60.0 |
| PGSC0003DMT400063850 | Potato | plasma membrane | 68.7 | 59.93 |
| EES19554 | Sorghum | golgi, plasma membrane | 61.79 | 59.38 |
| PGSC0003DMT400035874 | Potato | golgi, plasma membrane | 47.56 | 58.79 |
| GSMUA_Achr5P01260_001 | Banana | golgi, plasma membrane | 61.38 | 58.75 |
| TraesCS3D01G403300.1 | Wheat | plasma membrane | 63.82 | 58.36 |
| TraesCS3A01G408200.1 | Wheat | golgi, plasma membrane | 64.23 | 58.3 |
| TraesCS3B01G441800.1 | Wheat | golgi, plasma membrane | 63.82 | 57.3 |
| KXG33819 | Sorghum | extracellular, golgi | 62.6 | 57.25 |
| PGSC0003DMT400095936 | Potato | golgi, plasma membrane | 54.06 | 57.08 |
| Zm00001d000222_P001 | Maize | plasma membrane | 61.38 | 56.55 |
| Os01t0881300-02 | Rice | plasma membrane | 62.6 | 56.41 |
| Solyc04g064640.2.1 | Tomato | endoplasmic reticulum, golgi | 54.88 | 55.33 |
| Solyc06g060590.2.1 | Tomato | plasma membrane | 57.32 | 55.08 |
| PGSC0003DMT400035873 | Potato | plasma membrane | 56.5 | 54.3 |
| Solyc06g060580.1.1 | Tomato | golgi, plasma membrane | 54.88 | 53.78 |
| Solyc04g064630.2.1 | Tomato | golgi, plasma membrane | 51.63 | 50.8 |
| HORVU3Hr1G091230.10 | Barley | plasma membrane | 56.5 | 47.6 |
| CDY05123 | Canola | plasma membrane | 41.46 | 46.79 |
| CDX90787 | Canola | plasma membrane | 41.06 | 46.33 |
| CDX86834 | Canola | plasma membrane | 43.5 | 42.97 |
| CDY40867 | Canola | plasma membrane | 43.5 | 42.97 |
| CDY16757 | Canola | extracellular, peroxisome, plasma membrane | 41.87 | 42.92 |
| CDY56741 | Canola | plasma membrane | 41.06 | 42.08 |
| CDY45751 | Canola | extracellular, golgi, plasma membrane | 40.24 | 41.25 |
| CDY30733 | Canola | extracellular, golgi, plasma membrane | 40.24 | 41.25 |
| CDY49756 | Canola | plasma membrane | 41.06 | 41.22 |
| CDX96199 | Canola | golgi, plasma membrane | 43.09 | 41.09 |
| CDY27020 | Canola | golgi, plasma membrane | 43.09 | 40.93 |
| CDY69440 | Canola | plasma membrane | 35.37 | 40.65 |
| CDY36831 | Canola | plasma membrane | 39.02 | 40.34 |
| CDY61492 | Canola | golgi, plasma membrane | 37.8 | 40.09 |
| CDY04003 | Canola | plasma membrane | 40.24 | 40.08 |
| CDY20083 | Canola | plasma membrane | 38.21 | 39.83 |
| CDX97600 | Canola | plasma membrane | 37.8 | 39.41 |
| CDY14399 | Canola | mitochondrion | 35.37 | 39.37 |
| CDY30734 | Canola | plasma membrane | 38.21 | 39.17 |
| CDY44578 | Canola | plasma membrane | 37.8 | 39.08 |
| CDX98492 | Canola | plasma membrane | 37.4 | 38.98 |
| CDY32341 | Canola | plasma membrane | 36.99 | 38.56 |
| CDY34967 | Canola | plasma membrane | 35.77 | 38.1 |
| CDY09729 | Canola | golgi, plasma membrane, vacuole | 36.99 | 37.92 |
| CDX75890 | Canola | plasma membrane | 34.96 | 37.23 |
| CDX82395 | Canola | plasma membrane | 34.96 | 37.23 |
| CDY24920 | Canola | extracellular, golgi, vacuole | 23.17 | 36.77 |
| CDX90555 | Canola | golgi, plasma membrane, vacuole | 35.77 | 36.67 |
| CDY25828 | Canola | mitochondrion, plasma membrane | 26.02 | 36.57 |
| CDX84358 | Canola | plasma membrane | 30.89 | 36.36 |
| CDX86454 | Canola | plasma membrane, plastid | 41.46 | 34.34 |
| CDY44448 | Canola | plasma membrane, plastid | 41.46 | 33.77 |
| CDY24854 | Canola | golgi, plasma membrane | 36.59 | 33.21 |
| CDX77928 | Canola | plasma membrane | 38.21 | 32.98 |
| CDX83046 | Canola | plasma membrane | 38.21 | 32.87 |
| CDY34333 | Canola | golgi, plasma membrane | 36.18 | 32.6 |
| CDY03395 | Canola | endoplasmic reticulum, golgi, plasma membrane | 36.18 | 32.6 |
| CDY08093 | Canola | plasma membrane | 38.21 | 32.53 |
| CDY05867 | Canola | plasma membrane | 38.21 | 32.53 |
| CDX68492 | Canola | plasma membrane | 37.8 | 32.52 |
| CDX84877 | Canola | golgi, plasma membrane | 35.77 | 32.35 |
| CDY11047 | Canola | golgi, plasma membrane | 35.77 | 32.23 |
| CDX92666 | Canola | golgi, plasma membrane | 35.77 | 32.23 |
| CDX87161 | Canola | endoplasmic reticulum | 36.18 | 32.13 |
| CDY05819 | Canola | golgi, plasma membrane | 38.21 | 31.97 |
| CDX71659 | Canola | golgi, plasma membrane | 38.21 | 31.86 |
| CDY16863 | Canola | endoplasmic reticulum, plasma membrane | 35.77 | 31.77 |
| CDY53626 | Canola | plasma membrane | 37.4 | 31.62 |
| CDX80379 | Canola | plasma membrane | 36.99 | 31.6 |
| CDX88041 | Canola | plasma membrane | 36.99 | 31.6 |
| CDX78511 | Canola | plasma membrane | 36.99 | 31.16 |
| CDX91144 | Canola | plasma membrane | 36.59 | 30.3 |
| CDX85668 | Canola | endoplasmic reticulum, golgi, plasma membrane | 36.59 | 30.3 |
| CDX97233 | Canola | golgi, plasma membrane | 36.59 | 30.2 |
| CDX69663 | Canola | golgi, plasma membrane | 36.59 | 30.2 |
| CDY08964 | Canola | plastid | 34.55 | 29.51 |
| CDY45750 | Canola | cytosol, golgi, plasma membrane | 33.33 | 28.37 |
| CDX73521 | Canola | golgi, mitochondrion, plasma membrane, plastid | 30.08 | 27.92 |
| CDY07676 | Canola | golgi, plasma membrane | 29.67 | 27.44 |
Protein Annotations
| Gene3D:1.20.1280.290 | MapMan:24.2.6.1 | GO:A0A078IJS4 | UniProt:A0A078IJS4 | EnsemblPlants:CDY50241 | ProteinID:CDY50241 |
| ProteinID:CDY50241.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008643 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034219 |
| GO:GO:0051119 | EnsemblPlantsGene:GSBRNA2T00096220001 | PFAM:PF03083 | PANTHER:PTHR10791 | PANTHER:PTHR10791:SF44 | InterPro:SWEET1 |
| InterPro:SWEET_sugar_transpr | TMHMM:TMhelix | UniParc:UPI0004EEB4B4 | SEG:seg | : | : |
Description
BnaA06g15180DBidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:A0A078IJS4]
Coordinates
chrLK032892:-:48102..49582
Molecular Weight (calculated)
27184.8 Da
IEP (calculated)
9.623
GRAVY (calculated)
0.535
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MNIAHTIFGV FGNATALFLF LAPSITFKRI IKNKSTEQFS GIPYPMTLLN CLLSAWYGLP FVSKDNTLVS TINGTGALIE TVYVLIFLFY APKKEKAKIF
101: GVFTVVLAVF ATVALVSLFA LHGNARKLFC GIAATVFSII MYASPLSIMR LVIKTKSVEY MPFFLSLFVF LCGTSWFIYG LIGRDPFVAI PNGFGCALGT
201: LQLILYVIYC GNKGEKSAEK DDKSLEMKGE EKKQNVVNGK QQEQQV
101: GVFTVVLAVF ATVALVSLFA LHGNARKLFC GIAATVFSII MYASPLSIMR LVIKTKSVEY MPFFLSLFVF LCGTSWFIYG LIGRDPFVAI PNGFGCALGT
201: LQLILYVIYC GNKGEKSAEK DDKSLEMKGE EKKQNVVNGK QQEQQV
001: MNIAHTIFGV FGNATALFLF LAPSITFKRI IKNKSTEQFS GIPYPMTLLN CLLSAWYGLP FVSKDNTLVS TINGTGAVIE TVYVLIFLFY APKKEKIKIF
101: GIFSCVLAVF ATVALVSLFA LQGNGRKLFC GLAATVFSII MYASPLSIMR LVVKTKSVEF MPFFLSLFVF LCGTSWFVYG LIGRDPFVAI PNGFGCALGT
201: LQLILYFIYC GNKGEKSADA QKDEKSVEMK DDEKKQNVVN GKQDLQV
101: GIFSCVLAVF ATVALVSLFA LQGNGRKLFC GLAATVFSII MYASPLSIMR LVVKTKSVEF MPFFLSLFVF LCGTSWFVYG LIGRDPFVAI PNGFGCALGT
201: LQLILYFIYC GNKGEKSADA QKDEKSVEMK DDEKKQNVVN GKQDLQV
Arabidopsis Description
SWEET1Bidirectional sugar transporter SWEET1 [Source:UniProtKB/Swiss-Prot;Acc:Q8L9J7]
SUBAcon: [plasma membrane,golgi,extracellular]
SUBAcon: [plasma membrane,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.