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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY20083 Canola plasma membrane 96.61 96.61
CDX98492 Canola plasma membrane 86.02 86.02
CDX97600 Canola plasma membrane 85.59 85.59
AT3G14770.1 Thale cress plasma membrane 83.47 83.47
VIT_19s0014g00280.t01 Wine grape golgi, plasma membrane, plastid 66.95 67.23
KRH13025 Soybean golgi, plasma membrane, vacuole 63.56 62.76
KRH27431 Soybean plasma membrane 62.29 62.55
KRH21866 Soybean plasma membrane 62.29 62.55
PGSC0003DMT400018258 Potato plasma membrane 52.54 61.08
Solyc07g062120.2.1 Tomato plasma membrane, plastid 60.17 60.43
GSMUA_Achr1P25290_001 Banana plasma membrane, plastid 58.47 57.5
KRH13004 Soybean plasma membrane 54.24 57.4
KXG32677 Sorghum golgi, plasma membrane, vacuole 55.93 54.32
Os01t0541800-01 Rice plasma membrane 55.51 53.91
TraesCS6B01G176800.1 Wheat plasma membrane 52.97 52.3
TraesCS6D01G138000.1 Wheat plasma membrane 52.97 52.3
TraesCS6A01G148600.1 Wheat plasma membrane 52.54 51.88
GSMUA_Achr1P12680_001 Banana nucleus 56.78 48.55
HORVU6Hr1G029520.4 Barley plastid 53.39 40.78
CDX90787 Canola plasma membrane 34.32 37.16
CDY05123 Canola plasma membrane 34.32 37.16
CDY50241 Canola extracellular, golgi, plasma membrane 38.56 36.99
CDY04628 Canola extracellular, golgi 38.14 36.59
CDX96591 Canola golgi, plasma membrane 38.56 36.26
CDY67972 Canola golgi, plasma membrane 38.56 36.26
CDY27020 Canola golgi, plasma membrane 38.14 34.75
CDX96199 Canola golgi, plasma membrane 37.71 34.5
CDY40867 Canola plasma membrane 36.02 34.14
CDX86834 Canola plasma membrane 36.02 34.14
CDY14399 Canola mitochondrion 31.78 33.94
CDY61492 Canola golgi, plasma membrane 33.05 33.62
CDY16757 Canola extracellular, peroxisome, plasma membrane 32.2 31.67
CDY44578 Canola plasma membrane 31.36 31.09
CDY45751 Canola extracellular, golgi, plasma membrane 31.36 30.83
CDY30733 Canola extracellular, golgi, plasma membrane 31.36 30.83
CDX82395 Canola plasma membrane 30.08 30.74
CDX75890 Canola plasma membrane 30.08 30.74
CDY36831 Canola plasma membrane 30.93 30.67
CDY56741 Canola plasma membrane 30.93 30.42
CDY30734 Canola plasma membrane 30.93 30.42
CDY34967 Canola plasma membrane 29.66 30.3
CDY11047 Canola golgi, plasma membrane 34.75 30.04
CDX92666 Canola golgi, plasma membrane 34.75 30.04
CDX90555 Canola golgi, plasma membrane, vacuole 30.51 30.0
CDY09729 Canola golgi, plasma membrane, vacuole 30.51 30.0
CDY24920 Canola extracellular, golgi, vacuole 19.49 29.68
CDY24854 Canola golgi, plasma membrane 33.9 29.52
CDY69440 Canola plasma membrane 26.69 29.44
CDY04003 Canola plasma membrane 30.51 29.15
CDY49756 Canola plasma membrane 30.08 28.98
CDY05819 Canola golgi, plasma membrane 36.02 28.91
CDX87161 Canola endoplasmic reticulum 33.9 28.88
CDY16863 Canola endoplasmic reticulum, plasma membrane 33.47 28.52
CDX71659 Canola golgi, plasma membrane 35.59 28.47
CDY34333 Canola golgi, plasma membrane 32.63 28.21
CDY03395 Canola endoplasmic reticulum, golgi, plasma membrane 32.63 28.21
CDX80379 Canola plasma membrane 33.47 27.43
CDX88041 Canola plasma membrane 33.47 27.43
CDX83046 Canola plasma membrane 32.2 26.57
CDX77928 Canola plasma membrane 31.78 26.32
CDY08093 Canola plasma membrane 32.2 26.3
CDY05867 Canola plasma membrane 32.2 26.3
CDX68492 Canola plasma membrane 31.78 26.22
CDY08964 Canola plastid 31.78 26.04
CDX85668 Canola endoplasmic reticulum, golgi, plasma membrane 32.2 25.59
CDX91144 Canola plasma membrane 32.2 25.59
CDY53626 Canola plasma membrane 31.36 25.43
CDX69663 Canola golgi, plasma membrane 31.78 25.17
CDY25828 Canola mitochondrion, plasma membrane 18.64 25.14
CDX78511 Canola plasma membrane 30.93 25.0
CDX73521 Canola golgi, mitochondrion, plasma membrane, plastid 27.97 24.91
CDX97233 Canola golgi, plasma membrane 31.36 24.83
CDX86454 Canola plasma membrane, plastid 30.51 24.24
CDY44448 Canola plasma membrane, plastid 30.51 23.84
CDX84877 Canola golgi, plasma membrane 27.12 23.53
CDX84358 Canola plasma membrane 20.76 23.45
CDY07676 Canola golgi, plasma membrane 25.85 22.93
CDY45750 Canola cytosol, golgi, plasma membrane 27.54 22.49
Protein Annotations
EnsemblPlants:CDY32341EnsemblPlantsGene:GSBRNA2T00051860001Gene3D:1.20.1280.290GO:A0A078H3E4GO:GO:0005575GO:GO:0005623
GO:GO:0005886GO:GO:0006810GO:GO:0008150GO:GO:0008643GO:GO:0016020GO:GO:0016021
InterPro:SWEET_sugar_transprPANTHER:PTHR10791PANTHER:PTHR10791:SF57PFAM:PF03083ProteinID:CDY32341ProteinID:CDY32341.1
SEG:segTMHMM:TMhelixUniParc:UPI0004EE75B1UniProt:A0A078H3E4MapMan:24.2.6.1:
Description
BnaC01g36600DBidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:A0A078H3E4]
Coordinates
chrLK032292:+:250496..254184
Molecular Weight (calculated)
26701.3 Da
IEP (calculated)
8.677
GRAVY (calculated)
0.727
Length
236 amino acids
Sequence
(BLAST)
001: MEFFTVDGSF SKWKDVAGIA GNIFAFGLFV SPMPTFRRIM RNKSTEQFSG LPYIYALLNC LICLWYGSPY VSQRNFMLVT VNGVGATFQL CYIILFILHT
101: DKKTKMRMLV LLLVVFAVVA LIVVGSLQIP EKVTRWYLVG FMSCGSLVSM FASPLFVINL VIQTKSVEFM PFYLSLSTFL MSASFFMFGI FNSDAFVYTP
201: NGIGTVLGIV QLSLYCYFHR NSVEEETKEP LIVSYV
Best Arabidopsis Sequence Match ( AT3G14770.1 )
(BLAST)
001: MDVFAFNASL SMCKDVAGIA GNIFAFGLFV SPMPTFRRIM RNKSTEQFSG LPYIYALLNC LICLWYGTPF ISHSNAMLMT VNSVGATFQL CYIILFIMHT
101: DKKNKMKMLG LLFVVFAVVG VIVAGSLQIP DQLTRWYFVG FLSCGSLVSM FASPLFVINL VIRTKSVEFM PFYLSLSTFL MSASFLLYGL FNSDAFVYTP
201: NGIGTILGIV QLALYCYYHR NSIEEETKEP LIVSYV
Arabidopsis Description
SWEET2Bidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:A0A178VM79]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.