CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

plastid 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27020	Canola	golgi, plasma membrane	95.35	94.98
CDY61492	Canola	golgi, plasma membrane	76.36	84.91
AT5G53190.1	Thale cress	plasma membrane	84.5	82.89
CDY14399	Canola	mitochondrion	68.99	80.54
VIT_16s0050g02540.t01	Wine grape	plasma membrane	62.02	64.26
KRH64501	Soybean	golgi, plasma membrane	41.09	60.92
Solyc03g007360.2.1	Tomato	golgi, plasma membrane	60.08	60.31
PGSC0003DMT400023436	Potato	golgi, plasma membrane	34.88	57.32
KRH16514	Soybean	plasma membrane	54.26	55.12
KRH18150	Soybean	endoplasmic reticulum, plasma membrane, plastid	54.26	54.9
KRH53444	Soybean	golgi, plasma membrane	53.1	53.94
KRH16511	Soybean	golgi, plasma membrane	51.16	50.77
EES00047	Sorghum	plasma membrane	50.39	50.19
TraesCS1D01G125900.2	Wheat	plasma membrane	46.9	49.19
TraesCS1B01G147200.1	Wheat	plasma membrane	46.51	48.78
TraesCS1A01G129600.1	Wheat	plasma membrane	46.51	48.78
HORVU1Hr1G029920.4	Barley	plasma membrane	45.74	47.58
CDY50241	Canola	extracellular, golgi, plasma membrane	41.09	43.09
KXG21564	Sorghum	plasma membrane	41.09	43.09
CDY04628	Canola	extracellular, golgi	40.7	42.68
Zm00001d010440_P001	Maize	extracellular, golgi, plasma membrane	38.76	42.02
Zm00001d039347_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, plasma membrane	42.64	41.51
CDY05123	Canola	plasma membrane	34.5	40.83
Os05t0214300-00	Rice	golgi, plasma membrane	41.09	40.77
CDY67972	Canola	golgi, plasma membrane	39.53	40.64
CDX90787	Canola	plasma membrane	34.11	40.37
CDX96591	Canola	golgi, plasma membrane	39.15	40.24
CDX97600	Canola	plasma membrane	36.43	39.83
CDX98492	Canola	plasma membrane	36.05	39.41
CDY20083	Canola	plasma membrane	34.88	38.14
CDY44578	Canola	plasma membrane	34.88	37.82
CDY36831	Canola	plasma membrane	34.88	37.82
CDX86834	Canola	plasma membrane	36.43	37.75
CDY32341	Canola	plasma membrane	34.5	37.71
CDY49756	Canola	plasma membrane	35.66	37.55
CDY40867	Canola	plasma membrane	36.05	37.35
CDY04003	Canola	plasma membrane	35.27	36.84
CDY69440	Canola	plasma membrane	29.07	35.05
CDY09729	Canola	golgi, plasma membrane, vacuole	32.56	35.0
CDX75890	Canola	plasma membrane	31.01	34.63
CDY34967	Canola	plasma membrane	31.01	34.63
CDX82395	Canola	plasma membrane	31.01	34.63
CDX90555	Canola	golgi, plasma membrane, vacuole	32.17	34.58
CDY16757	Canola	extracellular, peroxisome, plasma membrane	31.78	34.17
CDY45751	Canola	extracellular, golgi, plasma membrane	31.78	34.17
CDY30733	Canola	extracellular, golgi, plasma membrane	31.78	34.17
CDY56741	Canola	plasma membrane	31.4	33.75
CDY25828	Canola	mitochondrion, plasma membrane	22.09	32.57
CDY30734	Canola	plasma membrane	30.23	32.5
CDX86454	Canola	plasma membrane, plastid	36.82	31.99
CDY24920	Canola	extracellular, golgi, vacuole	18.99	31.61
CDY44448	Canola	plasma membrane, plastid	36.82	31.46
CDX84877	Canola	golgi, plasma membrane	29.84	28.31
CDX84358	Canola	plasma membrane	22.87	28.23
CDX85668	Canola	endoplasmic reticulum, golgi, plasma membrane	32.17	27.95
CDX91144	Canola	plasma membrane	32.17	27.95
CDY34333	Canola	golgi, plasma membrane	29.46	27.84
CDY03395	Canola	endoplasmic reticulum, golgi, plasma membrane	29.46	27.84
CDX78511	Canola	plasma membrane	31.4	27.74
CDX73521	Canola	golgi, mitochondrion, plasma membrane, plastid	28.29	27.55
CDX69663	Canola	golgi, plasma membrane	31.78	27.52
CDX77928	Canola	plasma membrane	30.23	27.37
CDY24854	Canola	golgi, plasma membrane	28.68	27.31
CDX97233	Canola	golgi, plasma membrane	31.4	27.18
CDY53626	Canola	plasma membrane	30.62	27.15
CDX92666	Canola	golgi, plasma membrane	28.68	27.11
CDY11047	Canola	golgi, plasma membrane	28.68	27.11
CDX83046	Canola	plasma membrane	29.84	26.92
CDX87161	Canola	endoplasmic reticulum	28.68	26.71
CDY07676	Canola	golgi, plasma membrane	27.52	26.69
CDY05867	Canola	plasma membrane	29.84	26.64
CDY08093	Canola	plasma membrane	29.84	26.64
CDX68492	Canola	plasma membrane	29.46	26.57
CDX71659	Canola	golgi, plasma membrane	30.23	26.44
CDY16863	Canola	endoplasmic reticulum, plasma membrane	28.29	26.35
CDY05819	Canola	golgi, plasma membrane	29.46	25.85
CDX88041	Canola	plasma membrane	28.29	25.35
CDX80379	Canola	plasma membrane	27.91	25.0
CDY08964	Canola	plastid	27.13	24.31
CDY45750	Canola	cytosol, golgi, plasma membrane	25.19	22.49

Protein Annotations

EnsemblPlants:CDX96199	EnsemblPlantsGene:GSBRNA2T00102277001	Gene3D:1.20.1280.290	GO:A0A078E6B3	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:SWEET_sugar_transpr	PANTHER:PTHR10791	PANTHER:PTHR10791:SF28	PFAM:PF03083	ProteinID:CDX96199
ProteinID:CDX96199.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE12B2	MapMan:24.2.6.1	:

Description

BnaC02g14520D

Coordinates

chrLK031893:-:470890..472725

Molecular Weight (calculated)

29097.1 Da

IEP (calculated)

8.797

GRAVY (calculated)

0.476

Length

258 amino acids

Sequence
(BLAST)

001: MGGKLRLFIG ILGNGASMLL YTAPILTFSR VFKKKSTEEF SCFPYVMTLL NCLIYTWYGL PIVSHLWENL PLVTINGVGI LLESLFIFIY FCYSSPKEKV
101: KVGVIFVPVV VILFGLAVIS AVVFDEHRHR KSFVGSFGLV ASISMYGSPL VVMKKVIETK SVEYMPFYLS FFSFLASSLW LAYGLLSHDL FLASPNMVGT
201: PLGILQLILY FKYKNKETPI TTTVMSKWDD EKNKRTLELV VDVDHDGDAN EKKFNNAC

Best Arabidopsis Sequence Match ( AT5G53190.1 )
(BLAST)

001: MGDKLRLSIG ILGNGASLLL YTAPIVTFSR VFKKKSTEEF SCFPYVMTLF NCLIYTWYGL PIVSHLWENL PLVTINGVGI LLESIFIFIY FYYASPKEKI
101: KVGVTFVPVI VGFGLTTAIS ALVFDDHRHR KSFVGSVGLV ASISMYGSPL VVMKKVIETR SVEYMPFYLS FFSFLASSLW LAYGLLSHDL FLASPNMVAT
201: PLGILQLILY FKYKNKKDLA PTTMVITKRN DHDDKNKATL EFVVDVDRNS DTNEKNSNNA SSI

Arabidopsis Description

SWEET3Bidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:A0A178U9N2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.