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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 3
  • golgi 3
  • plasma membrane 7
  • endoplasmic reticulum 3
  • vacuole 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX86454 plasma membrane
CDY04003 plasma membrane
CDY44448 plasma membrane
CDY49756 plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G28007.1 CDX86454 AT3G28007.1 24027245
AT3G28007.1 CDY04003 AT3G28007.1 24027245
AT3G28007.1 CDY44448 AT3G28007.1 24027245
AT3G28007.1 CDY49756 AT3G28007.1 24027245
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033034.1-P Field mustard plasma membrane 100.0 100.0
CDY04003 Canola plasma membrane 96.73 95.95
AT3G28007.1 Thale cress plasma membrane 89.8 87.65
CDX86454 Canola plasma membrane, plastid 92.65 76.43
CDY44448 Canola plasma membrane, plastid 92.65 75.17
Os09t0256650-00 Rice extracellular 24.49 61.22
HORVU2Hr1G006520.1 Barley peroxisome, plasma membrane, vacuole 55.51 58.37
CDY16757 Canola extracellular, peroxisome, plasma membrane 57.14 58.33
TraesCS7B01G410700.1 Wheat plasma membrane 58.37 58.13
TraesCS7A01G503100.1 Wheat plasma membrane 58.37 57.89
TraesCS7A01G533900.1 Wheat plasma membrane 57.14 57.61
TraesCS7D01G521400.1 Wheat plasma membrane 57.14 57.61
TraesCS7B01G410800.1 Wheat golgi, plasma membrane, vacuole 42.04 57.54
CDY56741 Canola plasma membrane 56.33 57.5
HORVU2Hr1G006510.1 Barley plasma membrane 57.55 57.32
TraesCS7B01G451200.1 Wheat plasma membrane 56.73 57.2
TraesCS1A01G360900.1 Wheat plasma membrane 57.14 56.68
TraesCS1B01G377200.1 Wheat plasma membrane 57.14 56.68
TraesCS1D01G365200.1 Wheat plasma membrane 57.14 56.68
TraesCS2A01G043400.1 Wheat plasma membrane 56.73 56.5
TraesCSU01G013400.1 Wheat plasma membrane 56.73 56.5
TraesCSU01G181700.1 Wheat plasma membrane 56.73 56.5
TraesCSU01G191700.1 Wheat plasma membrane 56.73 56.5
TraesCS2A01G051800.1 Wheat plasma membrane 56.33 56.1
TraesCS2D01G042500.1 Wheat plasma membrane 56.33 56.1
TraesCS2D01G042600.1 Wheat plasma membrane 56.33 56.1
TraesCSU01G013200.1 Wheat plasma membrane 56.33 56.1
TraesCSU01G162000.1 Wheat plasma membrane 56.33 56.1
TraesCS7A01G159800.1 Wheat plasma membrane 55.92 55.69
TraesCS7D01G160600.1 Wheat plasma membrane 55.92 55.69
CDY45751 Canola extracellular, golgi, plasma membrane 54.29 55.42
TraesCS7B01G064800.1 Wheat plasma membrane 46.53 55.34
Zm00001d044421_P001 Maize plasma membrane 55.1 55.33
TraesCS2B01G055900.1 Wheat plasma membrane 55.51 55.28
TraesCS2B01G056100.1 Wheat plasma membrane 55.51 55.28
EES20039 Sorghum golgi, plasma membrane, vacuole 53.88 55.23
CDY30733 Canola extracellular, golgi, plasma membrane 53.88 55.0
TraesCS7B01G064400.1 Wheat plasma membrane 55.1 54.88
TraesCS7B01G064600.1 Wheat plasma membrane 55.1 54.88
EES01039 Sorghum plasma membrane 54.29 54.51
TraesCS7B01G064300.1 Wheat plasma membrane 54.69 54.47
TraesCS2A01G043200.1 Wheat plasma membrane 51.43 54.08
TraesCS2B01G055700.1 Wheat plasma membrane 51.43 54.08
TraesCS7B01G064700.1 Wheat plasma membrane 54.29 54.06
Os01t0605700-01 Rice golgi, plasma membrane, plastid 55.92 53.94
VIT_14s0066g01420.t01 Wine grape plasma membrane 55.92 53.94
TraesCS2D01G042400.1 Wheat plasma membrane 51.02 53.65
Os05t0588500-01 Rice golgi, plasma membrane, vacuole 51.84 53.59
Zm00001d011299_P001 Maize plasma membrane 53.06 53.5
CDY30734 Canola plasma membrane 52.24 53.33
HORVU7Hr1G117490.1 Barley plasma membrane 56.33 53.08
TraesCS7D01G490600.1 Wheat plasma membrane 34.69 52.47
CDY05123 Canola plasma membrane 46.53 52.29
GSMUA_Achr6P09180_001 Banana plasma membrane 49.8 51.91
Os01t0606000-00 Rice plasma membrane 54.69 51.74
GSMUA_Achr10P... Banana extracellular, golgi, plasma membrane 49.39 51.71
CDX90787 Canola plasma membrane 45.71 51.38
TraesCS2D01G052100.1 Wheat plasma membrane 40.82 51.28
TraesCSU01G232400.1 Wheat plasma membrane 40.82 51.28
TraesCSU01G249000.1 Wheat golgi, plasma membrane, vacuole 30.2 51.03
TraesCSU01G249100.1 Wheat golgi, plasma membrane, vacuole 29.8 50.34
Os09t0258700-00 Rice plasma membrane 45.31 50.0
HORVU1Hr1G079940.2 Barley peroxisome, plasma membrane, plastid 58.37 49.83
TraesCS7B01G064500.1 Wheat plasma membrane 39.18 49.23
Os12t0178500-00 Rice plasma membrane 41.22 48.33
CDY40867 Canola plasma membrane 48.98 48.19
CDX86834 Canola plasma membrane 48.57 47.79
CDX84358 Canola plasma membrane 40.0 46.89
TraesCS2B01G055800.1 Wheat plasma membrane 55.1 46.88
TraesCS3D01G227000.1 Wheat plasma membrane 38.78 46.8
TraesCS7A01G503300.1 Wheat plasma membrane 48.16 46.64
CDY44578 Canola plasma membrane 44.9 46.22
TraesCS7A01G503200.1 Wheat plasma membrane 49.39 45.83
CDY36831 Canola plasma membrane 44.08 45.38
TraesCS2B01G056000.2 Wheat plasma membrane 47.76 42.7
CDY04628 Canola extracellular, golgi 41.22 41.06
CDY50241 Canola extracellular, golgi, plasma membrane 41.22 41.06
CDX96591 Canola golgi, plasma membrane 41.63 40.64
CDY67972 Canola golgi, plasma membrane 40.82 39.84
CDX75890 Canola plasma membrane 36.73 38.96
CDY09729 Canola golgi, plasma membrane, vacuole 37.96 38.75
CDX82395 Canola plasma membrane 35.92 38.1
CDY34967 Canola plasma membrane 35.92 38.1
CDX90555 Canola golgi, plasma membrane, vacuole 37.14 37.92
CDY69440 Canola plasma membrane 33.06 37.85
CDY45750 Canola cytosol, golgi, plasma membrane 43.27 36.68
CDY27020 Canola golgi, plasma membrane 37.96 35.91
CDX96199 Canola golgi, plasma membrane 37.55 35.66
CDY24920 Canola extracellular, golgi, vacuole 22.45 35.48
Os09t0254600-00 Rice plastid 37.14 35.27
CDY14399 Canola mitochondrion 31.02 34.39
CDY61492 Canola golgi, plasma membrane 31.43 33.19
CDX97600 Canola plasma membrane 31.43 32.63
CDY25828 Canola mitochondrion, plasma membrane 23.27 32.57
CDX98492 Canola plasma membrane 31.02 32.2
CDY20083 Canola plasma membrane 30.2 31.36
CDX84877 Canola golgi, plasma membrane 33.88 30.51
CDY32341 Canola plasma membrane 28.98 30.08
CDY16863 Canola endoplasmic reticulum, plasma membrane 33.06 29.24
CDX87161 Canola endoplasmic reticulum 32.65 28.88
CDX77928 Canola plasma membrane 33.06 28.42
CDX73521 Canola golgi, mitochondrion, plasma membrane, plastid 30.61 28.3
CDY34333 Canola golgi, plasma membrane 31.43 28.21
CDY24854 Canola golgi, plasma membrane 31.02 28.04
CDX68492 Canola plasma membrane 32.65 27.97
CDX83046 Canola plasma membrane 32.65 27.97
CDX92666 Canola golgi, plasma membrane 31.02 27.84
CDY03395 Canola endoplasmic reticulum, golgi, plasma membrane 31.02 27.84
CDY11047 Canola golgi, plasma membrane 31.02 27.84
CDX80379 Canola plasma membrane 32.65 27.78
CDX88041 Canola plasma membrane 32.65 27.78
CDX85668 Canola endoplasmic reticulum, golgi, plasma membrane 33.47 27.61
CDX91144 Canola plasma membrane 33.47 27.61
CDY07676 Canola golgi, plasma membrane 29.8 27.44
CDY05867 Canola plasma membrane 32.24 27.34
CDY08093 Canola plasma membrane 32.24 27.34
CDY05819 Canola golgi, plasma membrane 32.65 27.21
CDX69663 Canola golgi, plasma membrane 33.06 27.18
CDY53626 Canola plasma membrane 32.24 27.15
CDX71659 Canola golgi, plasma membrane 32.65 27.12
CDX78511 Canola plasma membrane 31.84 26.71
CDX97233 Canola golgi, plasma membrane 32.24 26.51
CDY08964 Canola plastid 28.57 24.31
Protein Annotations
Gene3D:1.20.1280.290MapMan:24.2.6.1GO:A0A078IIF3UniProt:A0A078IIF3EnsemblPlants:CDY49756ProteinID:CDY49756
ProteinID:CDY49756.1GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0008643GO:GO:0016020
GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00093758001PFAM:PF03083PANTHER:PTHR10791PANTHER:PTHR10791:SF42InterPro:SWEET_sugar_transpr
TMHMM:TMhelixUniParc:UPI0002547202::::
Description
BnaA02g29150DBidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:A0A078IIF3]
Coordinates
chrLK032857:+:20136..21897
Molecular Weight (calculated)
27418.3 Da
IEP (calculated)
9.030
GRAVY (calculated)
0.734
Length
245 amino acids
Sequence
(BLAST)
001: MVSATVARNI AGIFGNVISL FLFLSPIPTF ITIYKMKKVE EYKADPYLAT VLNCALWVFY GLPIVHPDSL LVITINVTGL AIELFYLSVF FYFSPTQRKV
101: KVGIWLIGEM VFVGIVATCT LLLFHTHNQR STFVGIICVI FISIMYIAPL TIMSKVIKTK SVKYMPFSLS LANFLNGVIW VIYALIKFDL FILIGNGLGT
201: ISGVVQLILY ACYYKTTPKD EEEDNLSKAN LQLSGNEEHA KRVSA
Best Arabidopsis Sequence Match ( AT3G28007.1 )
(BLAST)
001: MVNATVARNI AGICGNVISL FLFLSPIPTF ITIYKKKKVE EYKADPYLAT VLNCALWVFY GLPMVQPDSL LVITINGTGL AIELVYLAIF FFFSPTSRKV
101: KVGLWLIGEM VFVGIVATCT LLLFHTHNQR SSFVGIFCVI FVSLMYIAPL TIMSKVIKTK SVKYMPFSLS LANFLNGVVW VIYALIKFDL FILIGNGLGT
201: VSGAVQLILY ACYYKTTPKD DEDEEDEENL SKVNSQLQLS GNSGQAKRVS A
Arabidopsis Description
SWEET4Bidirectional sugar transporter SWEET4 [Source:UniProtKB/Swiss-Prot;Acc:Q944M5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.