Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1A01G346800.3 | |
| TraesCS1A01G360900.1 | plasma membrane, plasma membrane |
| TraesCS1B01G360800.1 | |
| TraesCS1B01G377200.1 | plasma membrane, plasma membrane |
| TraesCS1D01G349700.1 | |
| TraesCS1D01G365200.1 | plasma membrane, plasma membrane |
| TraesCS2A01G043200.1 | plasma membrane, plasma membrane |
| TraesCS2A01G043400.1 | plasma membrane, plasma membrane |
| TraesCS2A01G051800.1 | plasma membrane, plasma membrane |
| TraesCS2B01G055700.1 | plasma membrane, plasma membrane |
| TraesCS2B01G055800.1 | plasma membrane, plasma membrane |
| TraesCS2B01G055900.1 | plasma membrane, plasma membrane |
| TraesCS2B01G056000.2 | plasma membrane, plasma membrane |
| TraesCS2B01G056100.1 | plasma membrane, plasma membrane |
| TraesCS2D01G042400.1 | plasma membrane, plasma membrane |
| TraesCS2D01G042500.1 | plasma membrane, plasma membrane |
| TraesCS2D01G042600.1 | plasma membrane, plasma membrane |
| TraesCS2D01G052100.1 | plasma membrane, plasma membrane |
| TraesCS3A01G151200.1 | |
| TraesCS3A01G278800.1 | |
| TraesCS3B01G178100.1 | |
| TraesCS3B01G313000.1 | |
| TraesCS3D01G159100.1 | |
| TraesCS3D01G227000.1 | plasma membrane, plasma membrane |
| TraesCS3D01G279100.1 | |
| TraesCS7A01G159800.1 | plasma membrane, plasma membrane |
| TraesCS7A01G341800.1 | |
| TraesCS7A01G503100.1 | plasma membrane, plasma membrane |
| TraesCS7A01G503200.1 | plasma membrane, plasma membrane |
| TraesCS7A01G503300.1 | plasma membrane, plasma membrane |
| TraesCS7A01G533900.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064300.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064400.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064500.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064600.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064700.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064800.1 | plasma membrane, plasma membrane |
| TraesCS7B01G241100.1 | |
| TraesCS7B01G410700.1 | plasma membrane, plasma membrane |
| TraesCS7B01G410800.1 | plasma membrane, plasma membrane |
| TraesCS7B01G451200.1 | plasma membrane, plasma membrane |
| TraesCS7D01G160600.1 | plasma membrane, plasma membrane |
| TraesCS7D01G337800.1 | |
| TraesCS7D01G490600.1 | plasma membrane, plasma membrane |
| TraesCS7D01G521400.1 | plasma membrane, plasma membrane |
| TraesCSU01G013200.1 | plasma membrane, plasma membrane |
| TraesCSU01G013400.1 | plasma membrane, plasma membrane |
| TraesCSU01G162000.1 | plasma membrane, plasma membrane |
| TraesCSU01G181700.1 | plasma membrane, plasma membrane |
| TraesCSU01G191700.1 | plasma membrane, plasma membrane |
| TraesCSU01G232400.1 | plasma membrane, plasma membrane |
| TraesCSU01G249000.1 | plasma membrane, plasma membrane |
| TraesCSU01G249100.1 | plasma membrane, plasma membrane |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G013200.1 | Wheat | plasma membrane | 97.56 | 97.56 |
| TraesCSU01G232400.1 | Wheat | plasma membrane | 77.24 | 97.44 |
| TraesCS2B01G055900.1 | Wheat | plasma membrane | 96.75 | 96.75 |
| TraesCSU01G181700.1 | Wheat | plasma membrane | 96.75 | 96.75 |
| TraesCSU01G191700.1 | Wheat | plasma membrane | 96.75 | 96.75 |
| TraesCS7A01G159800.1 | Wheat | plasma membrane | 96.34 | 96.34 |
| TraesCS2D01G042600.1 | Wheat | plasma membrane | 96.34 | 96.34 |
| TraesCS2D01G042500.1 | Wheat | plasma membrane | 96.34 | 96.34 |
| TraesCSU01G013400.1 | Wheat | plasma membrane | 95.94 | 95.94 |
| TraesCS7B01G064600.1 | Wheat | plasma membrane | 95.94 | 95.94 |
| TraesCS7B01G064400.1 | Wheat | plasma membrane | 95.94 | 95.94 |
| TraesCS7D01G160600.1 | Wheat | plasma membrane | 95.53 | 95.53 |
| TraesCS2B01G056100.1 | Wheat | plasma membrane | 95.12 | 95.12 |
| TraesCS7B01G064300.1 | Wheat | plasma membrane | 95.12 | 95.12 |
| TraesCSU01G249000.1 | Wheat | golgi, plasma membrane, vacuole | 55.69 | 94.48 |
| TraesCSU01G249100.1 | Wheat | golgi, plasma membrane, vacuole | 55.69 | 94.48 |
| TraesCS7B01G064700.1 | Wheat | plasma membrane | 93.9 | 93.9 |
| TraesCS7B01G064800.1 | Wheat | plasma membrane | 73.17 | 87.38 |
| HORVU2Hr1G006510.1 | Barley | plasma membrane | 85.77 | 85.77 |
| TraesCS2B01G055800.1 | Wheat | plasma membrane | 96.34 | 82.29 |
| EES01039 | Sorghum | plasma membrane | 76.83 | 77.46 |
| Zm00001d044421_P001 | Maize | plasma membrane | 74.8 | 75.41 |
| Zm00001d011299_P001 | Maize | plasma membrane | 73.98 | 74.9 |
| Os01t0605700-01 | Rice | golgi, plasma membrane, plastid | 71.54 | 69.29 |
| Os01t0606000-00 | Rice | plasma membrane | 71.95 | 68.34 |
| GSMUA_Achr10P... | Banana | extracellular, golgi, plasma membrane | 61.38 | 64.53 |
| GSMUA_Achr6P09180_001 | Banana | plasma membrane | 58.54 | 61.28 |
| VIT_17s0000g08110.t01 | Wine grape | cytosol, golgi, plasma membrane | 56.1 | 58.97 |
| VIT_14s0066g01420.t01 | Wine grape | plasma membrane | 60.57 | 58.66 |
| Bra033034.1-P | Field mustard | plasma membrane | 56.1 | 56.33 |
| CDY49756 | Canola | plasma membrane | 56.1 | 56.33 |
| Bra025317.1-P | Field mustard | plasma membrane | 56.1 | 55.65 |
| Solyc03g114200.2.1 | Tomato | golgi, plasma membrane, plastid | 53.25 | 55.51 |
| PGSC0003DMT400069697 | Potato | cytosol, golgi, plasma membrane | 53.25 | 55.04 |
| Solyc06g071400.2.1 | Tomato | cytosol, golgi, plasma membrane | 53.25 | 55.04 |
| CDY04003 | Canola | plasma membrane | 54.88 | 54.66 |
| CDY16757 | Canola | extracellular, peroxisome, plasma membrane | 53.25 | 54.58 |
| CDY45751 | Canola | extracellular, golgi, plasma membrane | 53.25 | 54.58 |
| CDY30733 | Canola | extracellular, golgi, plasma membrane | 52.85 | 54.17 |
| CDY56741 | Canola | plasma membrane | 52.85 | 54.17 |
| Bra035879.1-P | Field mustard | extracellular, golgi, plasma membrane | 52.85 | 54.17 |
| Bra029245.1-P | Field mustard | extracellular, golgi, plasma membrane | 52.85 | 54.17 |
| AT3G28007.1 | Thale cress | plasma membrane | 54.88 | 53.78 |
| KRH20314 | Soybean | plasma membrane | 53.25 | 53.47 |
| KRG93335 | Soybean | plasma membrane | 52.85 | 52.85 |
| KRG93333 | Soybean | plasma membrane | 52.44 | 52.44 |
| Solyc02g086920.1.1 | Tomato | golgi, plasma membrane | 49.59 | 52.36 |
| AT5G62850.1 | Thale cress | plasma membrane | 50.41 | 51.67 |
| CDY30734 | Canola | plasma membrane | 49.59 | 50.83 |
| Bra029244.1-P | Field mustard | plasma membrane | 49.59 | 50.83 |
| VIT_17s0000g08130.t01 | Wine grape | golgi, plasma membrane, vacuole | 31.71 | 50.65 |
| PGSC0003DMT400001425 | Potato | golgi, plasma membrane | 36.99 | 50.28 |
| KRH57053 | Soybean | plasma membrane | 45.12 | 49.12 |
| KRH03315 | Soybean | golgi, plasma membrane, plastid | 45.12 | 49.12 |
| CDY36831 | Canola | plasma membrane | 47.15 | 48.74 |
| AT5G40260.1 | Thale cress | plasma membrane | 47.15 | 48.54 |
| CDY44578 | Canola | plasma membrane | 46.34 | 47.9 |
| Bra025595.1-P | Field mustard | plasma membrane | 45.94 | 47.48 |
| CDX86454 | Canola | plasma membrane, plastid | 56.1 | 46.46 |
| CDY44448 | Canola | plasma membrane, plastid | 56.1 | 45.7 |
| CDX84358 | Canola | plasma membrane | 36.99 | 43.54 |
| Solyc11g028270.1.1 | Tomato | extracellular | 29.67 | 40.78 |
| CDY45750 | Canola | cytosol, golgi, plasma membrane | 43.9 | 37.37 |
| TraesCSU01G206000.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 34.15 | 28.09 |
Protein Annotations
| EnsemblPlants:TraesCSU01G162000.1 | EnsemblPlantsGene:TraesCSU01G162000 | Gene3D:1.20.1280.290 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:SWEET_sugar_transpr | PANTHER:PTHR10791 | PANTHER:PTHR10791:SF68 | PFAM:PF03083 | SEG:seg | TMHMM:TMhelix |
| MapMan:24.2.6.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:233475566..233477197
Molecular Weight (calculated)
27275.3 Da
IEP (calculated)
9.651
GRAVY (calculated)
0.705
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSADVARNI VGIIGNVISF GLFLSPVPTF WRIYKAKDVE EFKPDPYLAT LMNCLLWFFY GLPIVHPNST LVLTINGIGL VIEGAYIIIF TIYAAKNTRR
101: KMLGVLALEA AFMAAVVAGV LLGAHTHEKR SMIVGILCVI FGSIMYASPL TIMGKVIRTK SVEYMPFFLS LVNFLNGCCW MGYALIKFDI YITIPNALGT
201: IFGLIQLILY FYYYRSTPKK GKNVELPTVL TKNAVTSGNV SVTIEK
101: KMLGVLALEA AFMAAVVAGV LLGAHTHEKR SMIVGILCVI FGSIMYASPL TIMGKVIRTK SVEYMPFFLS LVNFLNGCCW MGYALIKFDI YITIPNALGT
201: IFGLIQLILY FYYYRSTPKK GKNVELPTVL TKNAVTSGNV SVTIEK
001: MTDPHTARTI VGIVGNVISF GLFCAPIPTM VKIWKMKSVS EFKPDPYVAT VLNCMMWTFY GLPFVQPDSL LVITINGTGL FMELVYVTIF FVFATSPVRR
101: KITIAMVIEV IFMAVVIFCT MYFLHTTKQR SMLIGILCIV FNVIMYAAPL TVMKLVIKTK SVKYMPFFLS LANFMNGVVW VIYACLKFDP YILIPNGLGS
201: LSGIIQLIIY ITYYKTTNWN DDDEDKEKRY SNAGIELGQA
101: KITIAMVIEV IFMAVVIFCT MYFLHTTKQR SMLIGILCIV FNVIMYAAPL TVMKLVIKTK SVKYMPFFLS LANFMNGVVW VIYACLKFDP YILIPNGLGS
201: LSGIIQLIIY ITYYKTTNWN DDDEDKEKRY SNAGIELGQA
Arabidopsis Description
SWEET5Bidirectional sugar transporter SWEET5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM10]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.