Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 2
- golgi 3
- plasma membrane 4
- endoplasmic reticulum 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1A01G346800.3 | |
| TraesCS1A01G360900.1 | plasma membrane, plasma membrane |
| TraesCS1B01G360800.1 | |
| TraesCS1B01G377200.1 | plasma membrane, plasma membrane |
| TraesCS1D01G349700.1 | |
| TraesCS1D01G365200.1 | plasma membrane, plasma membrane |
| TraesCS2A01G043200.1 | plasma membrane, plasma membrane |
| TraesCS2A01G043400.1 | plasma membrane, plasma membrane |
| TraesCS2A01G051800.1 | plasma membrane, plasma membrane |
| TraesCS2B01G055700.1 | plasma membrane, plasma membrane |
| TraesCS2B01G055800.1 | plasma membrane, plasma membrane |
| TraesCS2B01G055900.1 | plasma membrane, plasma membrane |
| TraesCS2B01G056000.2 | plasma membrane, plasma membrane |
| TraesCS2B01G056100.1 | plasma membrane, plasma membrane |
| TraesCS2D01G042400.1 | plasma membrane, plasma membrane |
| TraesCS2D01G042500.1 | plasma membrane, plasma membrane |
| TraesCS2D01G042600.1 | plasma membrane, plasma membrane |
| TraesCS2D01G052100.1 | plasma membrane, plasma membrane |
| TraesCS3A01G151200.1 | |
| TraesCS3A01G278800.1 | |
| TraesCS3B01G178100.1 | |
| TraesCS3B01G313000.1 | |
| TraesCS3D01G159100.1 | |
| TraesCS3D01G227000.1 | plasma membrane, plasma membrane |
| TraesCS3D01G279100.1 | |
| TraesCS7A01G159800.1 | plasma membrane, plasma membrane |
| TraesCS7A01G341800.1 | |
| TraesCS7A01G503100.1 | plasma membrane, plasma membrane |
| TraesCS7A01G503200.1 | plasma membrane, plasma membrane |
| TraesCS7A01G503300.1 | plasma membrane, plasma membrane |
| TraesCS7A01G533900.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064300.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064400.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064500.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064600.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064700.1 | plasma membrane, plasma membrane |
| TraesCS7B01G064800.1 | plasma membrane, plasma membrane |
| TraesCS7B01G241100.1 | |
| TraesCS7B01G410700.1 | plasma membrane, plasma membrane |
| TraesCS7B01G410800.1 | plasma membrane, plasma membrane |
| TraesCS7B01G451200.1 | plasma membrane, plasma membrane |
| TraesCS7D01G160600.1 | plasma membrane, plasma membrane |
| TraesCS7D01G337800.1 | |
| TraesCS7D01G490600.1 | plasma membrane, plasma membrane |
| TraesCS7D01G521400.1 | plasma membrane, plasma membrane |
| TraesCSU01G013200.1 | plasma membrane, plasma membrane |
| TraesCSU01G013400.1 | plasma membrane, plasma membrane |
| TraesCSU01G162000.1 | plasma membrane, plasma membrane |
| TraesCSU01G181700.1 | plasma membrane, plasma membrane |
| TraesCSU01G191700.1 | plasma membrane, plasma membrane |
| TraesCSU01G232400.1 | plasma membrane, plasma membrane |
| TraesCSU01G249000.1 | plasma membrane, plasma membrane |
| TraesCSU01G249100.1 | plasma membrane, plasma membrane |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G181700.1 | Wheat | plasma membrane | 97.15 | 97.15 |
| TraesCSU01G191700.1 | Wheat | plasma membrane | 97.15 | 97.15 |
| TraesCSU01G013200.1 | Wheat | plasma membrane | 95.94 | 95.94 |
| TraesCSU01G162000.1 | Wheat | plasma membrane | 95.94 | 95.94 |
| TraesCSU01G232400.1 | Wheat | plasma membrane | 76.02 | 95.9 |
| TraesCS2A01G051800.1 | Wheat | plasma membrane | 95.53 | 95.53 |
| TraesCS2A01G043400.1 | Wheat | plasma membrane | 94.31 | 94.31 |
| TraesCSU01G249100.1 | Wheat | golgi, plasma membrane, vacuole | 54.06 | 91.72 |
| TraesCSU01G249000.1 | Wheat | golgi, plasma membrane, vacuole | 54.06 | 91.72 |
| HORVU2Hr1G006510.1 | Barley | plasma membrane | 85.37 | 85.37 |
| EES01039 | Sorghum | plasma membrane | 75.61 | 76.23 |
| Zm00001d044421_P001 | Maize | plasma membrane | 73.98 | 74.59 |
| Zm00001d011299_P001 | Maize | plasma membrane | 72.76 | 73.66 |
| Os01t0605700-01 | Rice | golgi, plasma membrane, plastid | 71.14 | 68.9 |
| Os01t0606000-00 | Rice | plasma membrane | 71.54 | 67.95 |
| GSMUA_Achr10P... | Banana | extracellular, golgi, plasma membrane | 60.57 | 63.68 |
| GSMUA_Achr6P09180_001 | Banana | plasma membrane | 57.72 | 60.43 |
| VIT_17s0000g08110.t01 | Wine grape | cytosol, golgi, plasma membrane | 54.88 | 57.69 |
| VIT_14s0066g01420.t01 | Wine grape | plasma membrane | 58.94 | 57.09 |
| Bra033034.1-P | Field mustard | plasma membrane | 56.5 | 56.73 |
| CDY49756 | Canola | plasma membrane | 56.5 | 56.73 |
| Bra025317.1-P | Field mustard | plasma membrane | 56.5 | 56.05 |
| Solyc03g114200.2.1 | Tomato | golgi, plasma membrane, plastid | 52.85 | 55.08 |
| CDY04003 | Canola | plasma membrane | 55.28 | 55.06 |
| PGSC0003DMT400069697 | Potato | cytosol, golgi, plasma membrane | 52.44 | 54.2 |
| AT3G28007.1 | Thale cress | plasma membrane | 55.28 | 54.18 |
| Solyc06g071400.2.1 | Tomato | cytosol, golgi, plasma membrane | 52.03 | 53.78 |
| KRH20314 | Soybean | plasma membrane | 53.25 | 53.47 |
| CDY45751 | Canola | extracellular, golgi, plasma membrane | 52.03 | 53.33 |
| CDY16757 | Canola | extracellular, peroxisome, plasma membrane | 51.63 | 52.92 |
| CDY30733 | Canola | extracellular, golgi, plasma membrane | 51.63 | 52.92 |
| Bra029245.1-P | Field mustard | extracellular, golgi, plasma membrane | 51.63 | 52.92 |
| KRG93335 | Soybean | plasma membrane | 52.85 | 52.85 |
| CDY56741 | Canola | plasma membrane | 51.22 | 52.5 |
| Bra035879.1-P | Field mustard | extracellular, golgi, plasma membrane | 51.22 | 52.5 |
| KRG93333 | Soybean | plasma membrane | 52.03 | 52.03 |
| Solyc02g086920.1.1 | Tomato | golgi, plasma membrane | 49.19 | 51.93 |
| AT5G62850.1 | Thale cress | plasma membrane | 49.59 | 50.83 |
| VIT_17s0000g08130.t01 | Wine grape | golgi, plasma membrane, vacuole | 31.71 | 50.65 |
| PGSC0003DMT400001425 | Potato | golgi, plasma membrane | 36.59 | 49.72 |
| Bra029244.1-P | Field mustard | plasma membrane | 48.37 | 49.58 |
| CDY30734 | Canola | plasma membrane | 48.37 | 49.58 |
| CDY36831 | Canola | plasma membrane | 47.56 | 49.16 |
| KRH57053 | Soybean | plasma membrane | 44.72 | 48.67 |
| KRH03315 | Soybean | golgi, plasma membrane, plastid | 44.72 | 48.67 |
| AT5G40260.1 | Thale cress | plasma membrane | 47.15 | 48.54 |
| CDY44578 | Canola | plasma membrane | 46.75 | 48.32 |
| Bra025595.1-P | Field mustard | plasma membrane | 46.34 | 47.9 |
| CDX86454 | Canola | plasma membrane, plastid | 56.5 | 46.8 |
| CDY44448 | Canola | plasma membrane, plastid | 56.5 | 46.03 |
| CDX84358 | Canola | plasma membrane | 35.77 | 42.11 |
| Solyc11g028270.1.1 | Tomato | extracellular | 29.27 | 40.22 |
| CDY45750 | Canola | cytosol, golgi, plasma membrane | 43.09 | 36.68 |
| TraesCSU01G206000.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 34.15 | 28.09 |
Protein Annotations
| EnsemblPlants:TraesCSU01G013400.1 | EnsemblPlantsGene:TraesCSU01G013400 | Gene3D:1.20.1280.290 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:SWEET_sugar_transpr | PANTHER:PTHR10791 | PANTHER:PTHR10791:SF68 | PFAM:PF03083 | SEG:seg | TMHMM:TMhelix |
| MapMan:24.2.6.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrUn:+:16612388..16614045
Molecular Weight (calculated)
27332.3 Da
IEP (calculated)
9.526
GRAVY (calculated)
0.760
Length
246 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSADVARNI VGITGNVISF GLFLSPVPTF WRIYKAKDVE EFKPDPYLAT LMNCLLWFFY GLPIVHPNST LVLTINGIGL VIESAYIIIF IIYAAKNTRW
101: KMLGVLALEA VFVAAVVAGV LLGAHTHEKR SMIVGILCVI FGSIMYASPL TIMGKVIRTK SVEYMPFFLS LVNFLNGCCW TAYALIKFDI YITIPNALGT
201: IFGLIQLIMY FYYYRSTPKK GKNVELPTVL TKNAVTSGIV SVTIEK
101: KMLGVLALEA VFVAAVVAGV LLGAHTHEKR SMIVGILCVI FGSIMYASPL TIMGKVIRTK SVEYMPFFLS LVNFLNGCCW TAYALIKFDI YITIPNALGT
201: IFGLIQLIMY FYYYRSTPKK GKNVELPTVL TKNAVTSGIV SVTIEK
001: MVNATVARNI AGICGNVISL FLFLSPIPTF ITIYKKKKVE EYKADPYLAT VLNCALWVFY GLPMVQPDSL LVITINGTGL AIELVYLAIF FFFSPTSRKV
101: KVGLWLIGEM VFVGIVATCT LLLFHTHNQR SSFVGIFCVI FVSLMYIAPL TIMSKVIKTK SVKYMPFSLS LANFLNGVVW VIYALIKFDL FILIGNGLGT
201: VSGAVQLILY ACYYKTTPKD DEDEEDEENL SKVNSQLQLS GNSGQAKRVS A
101: KVGLWLIGEM VFVGIVATCT LLLFHTHNQR SSFVGIFCVI FVSLMYIAPL TIMSKVIKTK SVKYMPFSLS LANFLNGVVW VIYALIKFDL FILIGNGLGT
201: VSGAVQLILY ACYYKTTPKD DEDEEDEENL SKVNSQLQLS GNSGQAKRVS A
Arabidopsis Description
SWEET4Bidirectional sugar transporter SWEET4 [Source:UniProtKB/Swiss-Prot;Acc:Q944M5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.