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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G079940.2 plasma membrane, plasma membrane
HORVU1Hr1G082010.3
HORVU2Hr1G006510.1 plasma membrane, plasma membrane
HORVU2Hr1G006520.1 plasma membrane, plasma membrane
HORVU3Hr1G030760.2
HORVU3Hr1G069970.2
HORVU7Hr1G075700.2
HORVU7Hr1G081290.4
HORVU7Hr1G117490.1 plasma membrane, plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G28007.1 HORVU1Hr1G079940.2 AT3G28007.1 24027245
AT3G28007.1 HORVU2Hr1G006510.1 AT3G28007.1 24027245
AT3G28007.1 HORVU2Hr1G006520.1 AT3G28007.1 24027245
AT3G28007.1 HORVU7Hr1G117490.1 AT3G28007.1 24027245
AT5G40260.1 HORVU1Hr1G079940.2 AT5G40260.1 24027245
AT5G40260.1 HORVU2Hr1G006510.1 AT5G40260.1 24027245
AT5G40260.1 HORVU2Hr1G006520.1 AT5G40260.1 24027245
AT5G40260.1 HORVU7Hr1G117490.1 AT5G40260.1 24027245
AT5G40260.1 HORVU1Hr1G082010.3 AT5G41600.1 21798944
AT5G40260.1 HORVU3Hr1G030760.2 AT5G41600.1 21798944
AT5G40260.1 HORVU3Hr1G069970.2 AT5G41600.1 21798944
AT5G40260.1 HORVU7Hr1G075700.2 AT5G41600.1 21798944
AT5G40260.1 HORVU7Hr1G081290.4 AT5G41600.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCSU01G249100.1 Wheat golgi, plasma membrane, vacuole 50.81 86.21
TraesCSU01G162000.1 Wheat plasma membrane 85.77 85.77
TraesCSU01G249000.1 Wheat golgi, plasma membrane, vacuole 50.41 85.52
TraesCS2D01G042500.1 Wheat plasma membrane 85.37 85.37
TraesCS2D01G042600.1 Wheat plasma membrane 85.37 85.37
TraesCSU01G191700.1 Wheat plasma membrane 85.37 85.37
TraesCSU01G013400.1 Wheat plasma membrane 85.37 85.37
TraesCSU01G181700.1 Wheat plasma membrane 85.37 85.37
TraesCS7A01G159800.1 Wheat plasma membrane 84.96 84.96
TraesCS2B01G055900.1 Wheat plasma membrane 84.96 84.96
TraesCS7D01G160600.1 Wheat plasma membrane 84.96 84.96
TraesCSU01G013200.1 Wheat plasma membrane 84.96 84.96
TraesCS7B01G064400.1 Wheat plasma membrane 84.55 84.55
TraesCS7B01G064600.1 Wheat plasma membrane 84.55 84.55
TraesCS2A01G051800.1 Wheat plasma membrane 84.55 84.55
TraesCS2A01G043400.1 Wheat plasma membrane 84.55 84.55
TraesCS2B01G056100.1 Wheat plasma membrane 83.74 83.74
TraesCS7B01G064300.1 Wheat plasma membrane 83.74 83.74
TraesCSU01G232400.1 Wheat plasma membrane 65.85 83.08
TraesCS2D01G052100.1 Wheat plasma membrane 65.45 82.56
TraesCS7B01G064700.1 Wheat plasma membrane 82.52 82.52
TraesCS7B01G064500.1 Wheat plasma membrane 64.23 81.03
TraesCS7B01G064800.1 Wheat plasma membrane 66.26 79.13
EES01039 Sorghum plasma membrane 76.02 76.64
HORVU1Hr1G079940.2 Barley peroxisome, plasma membrane, plastid 86.18 73.87
Zm00001d044421_P001 Maize plasma membrane 73.17 73.77
Zm00001d011299_P001 Maize plasma membrane 72.76 73.66
TraesCS2B01G055800.1 Wheat plasma membrane 84.55 72.22
HORVU7Hr1G117490.1 Barley plasma membrane 73.98 70.0
HORVU2Hr1G006520.1 Barley peroxisome, plasma membrane, vacuole 65.85 69.53
Os01t0605700-01 Rice golgi, plasma membrane, plastid 71.54 69.29
TraesCS2B01G056000.2 Wheat plasma membrane 76.02 68.25
Os01t0606000-00 Rice plasma membrane 71.54 67.95
GSMUA_Achr10P... Banana extracellular, golgi, plasma membrane 63.41 66.67
GSMUA_Achr6P09180_001 Banana plasma membrane 62.2 65.11
VIT_14s0066g01420.t01 Wine grape plasma membrane 62.6 60.63
VIT_17s0000g08110.t01 Wine grape cytosol, golgi, plasma membrane 56.1 58.97
Bra033034.1-P Field mustard plasma membrane 57.32 57.55
CDY49756 Canola plasma membrane 57.32 57.55
Bra025317.1-P Field mustard plasma membrane 57.72 57.26
Solyc03g114200.2.1 Tomato golgi, plasma membrane, plastid 53.25 55.51
CDY04003 Canola plasma membrane 55.69 55.47
AT3G28007.1 Thale cress plasma membrane 56.5 55.38
KRG93335 Soybean plasma membrane 55.28 55.28
KRH20314 Soybean plasma membrane 54.88 55.1
CDY45751 Canola extracellular, golgi, plasma membrane 53.66 55.0
CDY30733 Canola extracellular, golgi, plasma membrane 53.66 55.0
Bra029245.1-P Field mustard extracellular, golgi, plasma membrane 53.66 55.0
KRG93333 Soybean plasma membrane 54.88 54.88
Solyc06g071400.2.1 Tomato cytosol, golgi, plasma membrane 52.44 54.2
CDY16757 Canola extracellular, peroxisome, plasma membrane 52.85 54.17
PGSC0003DMT400069697 Potato cytosol, golgi, plasma membrane 52.03 53.78
Bra035879.1-P Field mustard extracellular, golgi, plasma membrane 52.44 53.75
CDY56741 Canola plasma membrane 52.44 53.75
HORVU6Hr1G055960.1 Barley golgi, plasma membrane, plastid 53.66 52.8
VIT_17s0000g08130.t01 Wine grape golgi, plasma membrane, vacuole 32.93 52.6
AT5G62850.1 Thale cress plasma membrane 51.22 52.5
Solyc02g086920.1.1 Tomato golgi, plasma membrane 49.59 52.36
Bra029244.1-P Field mustard plasma membrane 50.41 51.67
CDY30734 Canola plasma membrane 50.41 51.67
KRH03315 Soybean golgi, plasma membrane, plastid 45.53 49.56
PGSC0003DMT400001425 Potato golgi, plasma membrane 36.18 49.17
AT5G40260.1 Thale cress plasma membrane 47.56 48.95
CDY36831 Canola plasma membrane 47.15 48.74
CDY44578 Canola plasma membrane 46.34 47.9
CDX86454 Canola plasma membrane, plastid 57.72 47.81
Bra025595.1-P Field mustard plasma membrane 45.94 47.48
KRH57053 Soybean plasma membrane 43.5 47.35
CDY44448 Canola plasma membrane, plastid 57.72 47.02
CDX84358 Canola plasma membrane 36.59 43.06
Solyc11g028270.1.1 Tomato extracellular 30.08 41.34
CDY45750 Canola cytosol, golgi, plasma membrane 44.72 38.06
HORVU0Hr1G010080.2 Barley plasma membrane 37.4 34.2
HORVU3Hr1G091230.10 Barley plasma membrane 40.24 33.9
HORVU1Hr1G029920.4 Barley plasma membrane 31.71 31.45
HORVU6Hr1G089540.2 Barley golgi, plasma membrane 34.96 29.76
HORVU6Hr1G029520.4 Barley plastid 36.59 29.13
HORVU1Hr1G010210.2 Barley plasma membrane 34.15 28.77
HORVU6Hr1G000440.3 Barley golgi, plasma membrane 33.33 27.89
HORVU7Hr1G030160.1 Barley plasma membrane 34.55 27.16
HORVU5Hr1G076770.1 Barley golgi, plasma membrane 34.96 26.79
HORVU3Hr1G013170.1 Barley golgi, plasma membrane 33.33 26.11
HORVU7Hr1G054710.1 Barley plasma membrane 31.3 25.41
HORVU6Hr1G089600.1 Barley golgi, mitochondrion, peroxisome 35.37 24.72
Protein Annotations
EnsemblPlants:HORVU2Hr1G006510.1EnsemblPlantsGene:HORVU2Hr1G006510Gene3D:1.20.1280.290GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0008643GO:GO:0016020GO:GO:0016021InterPro:SWEET_sugar_transprPANTHER:PTHR10791PANTHER:PTHR10791:SF68
PFAM:PF03083SEG:segTMHMM:TMhelixUniParc:UPI000B47C407UniProt:A0A287GZM8MapMan:24.2.6.1
Description
Bidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:A0A287GZM8]
Coordinates
chrchr2H:-:13613171..13614579
Molecular Weight (calculated)
27027.1 Da
IEP (calculated)
9.613
GRAVY (calculated)
0.838
Length
246 amino acids
Sequence
(BLAST)
001: MVSAEVARNI VGIIGNVISF GLFLSPAPTF WRIIKAKDVE EFKPDPYLAT LLNCMLWCFY GLPIVHPNSI LVLTINGIGL IIESIYLVLF FIYAARNTRL
101: KMLGVLAIEV AFVAAVVAGV LLGAHTHEKR SMIVGILCVI FGSVMYASPL TIMGKVISTK SVEYMPFFLS LVNFLNGSCW LTYALIKFDL YITIPNGLGA
201: VFGVIQLILY FSFYKSTPKK GKNVELPTIV TKNAVTSGKV SVTIEK
Best Arabidopsis Sequence Match ( AT5G62850.1 )
(BLAST)
001: MTDPHTARTI VGIVGNVISF GLFCAPIPTM VKIWKMKSVS EFKPDPYVAT VLNCMMWTFY GLPFVQPDSL LVITINGTGL FMELVYVTIF FVFATSPVRR
101: KITIAMVIEV IFMAVVIFCT MYFLHTTKQR SMLIGILCIV FNVIMYAAPL TVMKLVIKTK SVKYMPFFLS LANFMNGVVW VIYACLKFDP YILIPNGLGS
201: LSGIIQLIIY ITYYKTTNWN DDDEDKEKRY SNAGIELGQA
Arabidopsis Description
SWEET5Bidirectional sugar transporter SWEET5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FM10]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.