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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, plasma membrane

Predictor Summary:
  • plastid 3
  • extracellular 4
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 4
  • vacuole 4
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
ChloroP:plastid
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G010210.2 plasma membrane
HORVU5Hr1G076770.1 plasma membrane
HORVU6Hr1G000440.3 plasma membrane
HORVU6Hr1G089540.2 plasma membrane
HORVU6Hr1G089600.1 plasma membrane
HORVU7Hr1G030160.1 plasma membrane
HORVU7Hr1G054710.1 plasma membrane

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48740.1 HORVU1Hr1G010210.2 AT3G48740.1 24027245
AT3G48740.1 HORVU5Hr1G076770.1 AT3G48740.1 24027245
AT3G48740.1 HORVU6Hr1G000440.3 AT3G48740.1 24027245
AT3G48740.1 HORVU6Hr1G089540.2 AT3G48740.1 24027245
AT3G48740.1 HORVU6Hr1G089600.1 AT3G48740.1 24027245
AT3G48740.1 HORVU7Hr1G030160.1 AT3G48740.1 24027245
AT3G48740.1 HORVU7Hr1G054710.1 AT3G48740.1 24027245
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G009100.1 Wheat plasma membrane 91.84 92.78
TraesCS6D01G012100.1 Wheat plasma membrane 90.48 90.48
TraesCS6B01G015200.1 Wheat plasma membrane 90.14 90.14
TraesCS6B01G015100.1 Wheat plasma membrane 88.78 88.78
HORVU1Hr1G010210.2 Barley plasma membrane 83.33 83.9
KXG28442 Sorghum golgi, plasma membrane 73.81 75.09
Zm00001d049252_P001 Maize plasma membrane 73.81 74.06
Os11t0508600-01 Rice golgi, plasma membrane 73.81 71.62
KRH63814 Soybean extracellular 21.09 63.92
Zm00001d007365_P001 Maize endoplasmic reticulum 73.81 63.08
GSMUA_Achr6P23850_001 Banana golgi, plasma membrane 58.5 62.55
HORVU6Hr1G089540.2 Barley golgi, plasma membrane 61.22 62.28
GSMUA_Achr3P18700_001 Banana golgi, plasma membrane, plastid 59.18 61.92
GSMUA_Achr6P07950_001 Banana golgi, plasma membrane 57.82 59.03
KRH63811 Soybean plasma membrane 49.66 56.59
CDY69440 Canola plasma membrane 41.16 56.54
KRH54140 Soybean plasma membrane 48.64 55.0
KRH59785 Soybean endoplasmic reticulum, plasma membrane 47.96 54.86
VIT_17s0000g00830.t01 Wine grape plasma membrane 50.34 54.81
KRH41097 Soybean golgi, plasma membrane 46.94 54.33
KRH54141 Soybean plasma membrane 47.62 54.26
KRH42232 Soybean endoplasmic reticulum, plasma membrane 48.98 52.55
KRH58347 Soybean golgi, plasma membrane 50.0 51.94
GSMUA_Achr10P... Banana plasma membrane 58.5 51.5
KRH01827 Soybean golgi, plasma membrane 46.94 51.49
KRH46857 Soybean golgi, plasma membrane 47.62 51.28
HORVU6Hr1G089600.1 Barley golgi, mitochondrion, peroxisome 61.22 51.14
CDY24854 Canola golgi, plasma membrane 46.94 50.92
Bra010477.1-P Field mustard golgi, plasma membrane 46.94 50.74
KRH63812 Soybean endoplasmic reticulum, golgi, plasma membrane 48.64 50.71
Bra026487.1-P Field mustard endoplasmic reticulum, plasma membrane 47.62 50.54
KRH46856 Soybean plasma membrane 46.6 50.37
PGSC0003DMT400011081 Potato plasma membrane 43.2 50.2
KRH01828 Soybean plasma membrane 46.26 50.18
Solyc03g097620.1.1 Tomato plasma membrane 46.94 50.0
Bra019560.1-P Field mustard plasma membrane 48.3 49.82
CDX77928 Canola plasma membrane 48.3 49.82
Bra013854.1-P Field mustard golgi, plasma membrane 46.26 49.82
CDX92666 Canola golgi, plasma membrane 46.26 49.82
CDY03395 Canola endoplasmic reticulum, golgi, plasma membrane 46.26 49.82
CDY11047 Canola golgi, plasma membrane 46.26 49.82
CDY34333 Canola golgi, plasma membrane 46.26 49.82
AT5G50800.1 Thale cress plasma membrane 49.66 49.66
AT4G25010.1 Thale cress plasma membrane 47.28 49.47
CDX87161 Canola endoplasmic reticulum 46.6 49.46
CDY16863 Canola endoplasmic reticulum, plasma membrane 46.6 49.46
CDX68492 Canola plasma membrane 47.96 49.3
CDX83046 Canola plasma membrane 47.96 49.3
PGSC0003DMT400082699 Potato extracellular, plasma membrane 21.77 49.23
Bra029914.1-P Field mustard plasma membrane 47.96 48.62
Bra018039.1-P Field mustard plasma membrane 47.62 48.44
CDY05867 Canola plasma membrane 47.62 48.44
CDY08093 Canola plasma membrane 47.62 48.44
PGSC0003DMT400011076 Potato golgi, mitochondrion, plasma membrane, plastid 32.65 48.24
AT5G23660.1 Thale cress plasma membrane 46.6 48.07
Bra009700.1-P Field mustard plasma membrane 46.94 47.92
CDX88041 Canola plasma membrane 46.94 47.92
Bra019197.1-P Field mustard plasma membrane 38.78 47.9
AT3G48740.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 46.94 47.75
CDX80379 Canola plasma membrane 46.6 47.57
Solyc06g072620.2.1 Tomato golgi, plasma membrane 46.26 47.39
VIT_17s0000g00820.t01 Wine grape plasma membrane 42.86 47.37
Bra040489.1-P Field mustard golgi, plasma membrane 47.28 47.28
CDY05819 Canola golgi, plasma membrane 47.28 47.28
Solyc03g097610.2.1 Tomato golgi, plasma membrane 45.24 47.16
PGSC0003DMT400081206 Potato golgi, plasma membrane 46.94 47.1
CDX84877 Canola golgi, plasma membrane 43.54 47.06
VIT_01s0146g00260.t01 Wine grape golgi, plasma membrane 37.41 46.81
CDX71659 Canola golgi, plasma membrane 46.94 46.78
Solyc03g097560.2.1 Tomato golgi, plasma membrane 46.6 46.44
PGSC0003DMT400081210 Potato golgi, plasma membrane 46.6 46.28
PGSC0003DMT400081212 Potato golgi, plasma membrane 44.9 46.15
HORVU7Hr1G030160.1 Barley plasma membrane 48.3 45.37
KRH54137 Soybean plasma membrane 47.62 45.31
Solyc03g097580.2.1 Tomato golgi, plasma membrane 46.26 45.03
PGSC0003DMT400083992 Potato golgi, plasma membrane 45.92 45.0
Solyc03g097870.2.1 Tomato golgi, plasma membrane 45.92 45.0
KRH10466 Soybean golgi, plasma membrane 38.1 44.98
Solyc03g097590.2.1 Tomato golgi, plasma membrane 45.58 44.97
Bra022761.1-P Field mustard golgi, plasma membrane 43.88 44.64
CDY08964 Canola plastid 43.54 44.44
Solyc06g072630.2.1 Tomato plasma membrane 43.54 44.29
Solyc05g024260.2.1 Tomato plasma membrane 44.22 44.07
Bra012412.1-P Field mustard plasma membrane 26.19 44.0
HORVU3Hr1G013170.1 Barley golgi, plasma membrane 46.94 43.95
PGSC0003DMT400081211 Potato golgi, plasma membrane 43.88 43.58
Solyc03g097600.2.1 Tomato golgi, plasma membrane 43.88 43.58
AT5G13170.1 Thale cress plasma membrane 43.2 43.49
CDY25828 Canola mitochondrion, plasma membrane 25.85 43.43
AT5G50790.1 Thale cress plasma membrane 42.52 43.25
CDX78511 Canola plasma membrane 42.86 43.15
CDX69663 Canola golgi, plasma membrane 43.54 42.95
CDX97233 Canola golgi, plasma membrane 43.54 42.95
Bra023394.1-P Field mustard plasma membrane 43.2 42.76
CDX85668 Canola endoplasmic reticulum, golgi, plasma membrane 43.2 42.76
CDX91144 Canola plasma membrane 43.2 42.76
CDY53626 Canola plasma membrane 42.18 42.61
KRH41096 Soybean golgi, plasma membrane 41.84 41.84
KRH43976 Soybean golgi, plasma membrane, plastid 39.8 41.79
HORVU5Hr1G076770.1 Barley golgi, plasma membrane 44.9 41.12
Solyc03g097570.2.1 Tomato cytosol, golgi, plasma membrane 42.52 41.12
Solyc06g072640.1.1 Tomato plasma membrane 38.78 40.43
KRH59783 Soybean golgi, plasma membrane 31.29 38.98
HORVU7Hr1G054710.1 Barley plasma membrane 39.46 38.28
Bra006185.1-P Field mustard golgi, plasma membrane, plastid 39.46 36.71
PGSC0003DMT400021966 Potato mitochondrion 23.81 35.0
Bra008850.1-P Field mustard plasma membrane 24.15 33.97
HORVU2Hr1G006520.1 Barley peroxisome, plasma membrane, vacuole 26.87 33.91
HORVU2Hr1G006510.1 Barley plasma membrane 27.89 33.33
HORVU6Hr1G055960.1 Barley golgi, plasma membrane, plastid 27.89 32.8
HORVU0Hr1G010080.2 Barley plasma membrane 27.55 30.11
HORVU7Hr1G117490.1 Barley plasma membrane 25.51 28.85
HORVU3Hr1G091230.10 Barley plasma membrane 28.57 28.77
HORVU1Hr1G079940.2 Barley peroxisome, plasma membrane, plastid 27.55 28.22
HORVU1Hr1G029920.4 Barley plasma membrane 22.11 26.21
HORVU6Hr1G029520.4 Barley plastid 27.21 25.89
Protein Annotations
Gene3D:1.20.1280.290MapMan:24.2.6.1GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810
GO:GO:0008150GO:GO:0008643GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:HORVU6Hr1G000440EnsemblPlants:HORVU6Hr1G000440.3
UniProt:M0URZ5PFAM:PF03083PANTHER:PTHR10791PANTHER:PTHR10791:SF56InterPro:SWEET_sugar_transprTMHMM:TMhelix
UniParc:UPI000296DB00SEG:seg::::
Description
Bidirectional sugar transporter SWEET [Source:UniProtKB/TrEMBL;Acc:M0URZ5]
Coordinates
chrchr6H:+:1053692..1055923
Molecular Weight (calculated)
32204.1 Da
IEP (calculated)
8.944
GRAVY (calculated)
0.628
Length
294 amino acids
Sequence
(BLAST)
001: MGGLSLQHPW AFAFGLLGNV ISFMTYLAPL PTFYRIYRSK STQGFQSVPY VVALFSAMLW IYYALLKSDE CLLITINSAG CVIETIYIIV YLTYAPKQAK
101: LFTAKILLLL NVGVFGLILL LTLLLSEGEK RVVMLGWVCV GFSVSVFVAP LSVIRLVVRT RSVEFMPFSL SLSLTVSAVV WFLYGLLIKD KYVALPNILG
201: FTFGVIQMGL YAFYRNATPT PASKQVDGDD AVKVPEHVVD IAKLGPAAAV ELNTHYPVEP GMPPPMKENA KAGISDKTMG SIDMAGKATH VEQV
Best Arabidopsis Sequence Match ( AT5G23660.1 )
(BLAST)
001: MALFDTHNTW AFVFGLLGNL ISFAVFLSPV PTFYRICKKK TTEGFQSIPY VVALFSAMLW LYYATQKKDV FLLVTINSFG CFIETIYISI FVAFASKKAR
101: MLTVKLLLLM NFGGFCLILL LCQFLAKGTT RAKIIGGICV GFSVCVFAAP LSIIRTVIKT KSVEYMPFSL SLTLTISAVI WLLYGLALKD IYVAFPNVIG
201: FVLGALQMIL YVVYKYCKTP SDLVEKELEA AKLPEVSIDM VKLGTLTSPE PVAITVVRSV NTCNCNDRNA EIENGQGVRN SAATT
Arabidopsis Description
SWEET12Bidirectional sugar transporter SWEET12 [Source:UniProtKB/Swiss-Prot;Acc:O82587]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.